RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
SKA2-203ENST00000578105 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
SKA2-203ENST00000578105 MTUS2Q5JR59 1369 aa12.17□□□□□ -0.46
SKA2-203ENST00000578105 GRIN2AQ12879 1464 aa12.16□□□□□ -0.46
SKA2-203ENST00000578105 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
SKA2-203ENST00000578105 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
SKA2-203ENST00000578105 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
SKA2-203ENST00000578105 SETD5Q9C0A6 1442 aa12.16□□□□□ -0.46
SKA2-203ENST00000578105 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
SKA2-203ENST00000578105 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
SKA2-203ENST00000578105 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
SKA2-203ENST00000578105 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
SKA2-203ENST00000578105 ARHGEF11O15085 1522 aa12.14□□□□□ -0.47
SKA2-203ENST00000578105 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
SKA2-203ENST00000578105 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
SKA2-203ENST00000578105 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
SKA2-203ENST00000578105 MYOM3Q5VTT5 1437 aa12.12□□□□□ -0.47
SKA2-203ENST00000578105 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
SKA2-203ENST00000578105 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
SKA2-203ENST00000578105 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
SKA2-203ENST00000578105 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
SKA2-203ENST00000578105 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
SKA2-203ENST00000578105 EPRSP07814 1512 aaKnown RBP12.1□□□□□ -0.47
SKA2-203ENST00000578105 TCOF1Q13428 1488 aaKnown RBP12.09□□□□□ -0.47
SKA2-203ENST00000578105 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
SKA2-203ENST00000578105 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
SKA2-203ENST00000578105 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
SKA2-203ENST00000578105 NUP160Q12769 1436 aa12.08□□□□□ -0.48
SKA2-203ENST00000578105 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
SKA2-203ENST00000578105 CARMIL2Q6F5E8 1435 aa12.06□□□□□ -0.48
SKA2-203ENST00000578105 FAM50AQ14320 339 aaKnown RBP12.06□□□□□ -0.48
SKA2-203ENST00000578105 HFM1A2PYH4 1435 aa12.05□□□□□ -0.48
SKA2-203ENST00000578105 RAPGEF6Q8TEU7 1601 aa12.05□□□□□ -0.48
SKA2-203ENST00000578105 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
SKA2-203ENST00000578105 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
SKA2-203ENST00000578105 CHMP7Q8WUX9 453 aaPredicted RBP12.03□□□□□ -0.48
SKA2-203ENST00000578105 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
SKA2-203ENST00000578105 MAPKBP1O60336 1514 aa12.02□□□□□ -0.48
SKA2-203ENST00000578105 CEP170Q5SW79 1584 aa12.02□□□□□ -0.49
SKA2-203ENST00000578105 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
SKA2-203ENST00000578105 UACAQ9BZF9 1416 aa12□□□□□ -0.49
SKA2-203ENST00000578105 ITGAEP38570 1179 aa11.99□□□□□ -0.49
SKA2-203ENST00000578105 GCC2Q8IWJ2 1684 aa11.99□□□□□ -0.49
SKA2-203ENST00000578105 ADCY10Q96PN6 1610 aa11.98□□□□□ -0.49
SKA2-203ENST00000578105 NUP153P49790 1475 aaKnown RBP11.98□□□□□ -0.49
SKA2-203ENST00000578105 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
SKA2-203ENST00000578105 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
SKA2-203ENST00000578105 NAIPQ13075 1403 aa11.96□□□□□ -0.49
SKA2-203ENST00000578105 ROCK1Q13464 1354 aa11.96□□□□□ -0.49
SKA2-203ENST00000578105 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.5
SKA2-203ENST00000578105 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
SKA2-203ENST00000578105 ZNF579Q8NAF0 562 aaKnown RBP11.95□□□□□ -0.5
SKA2-203ENST00000578105 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
SKA2-203ENST00000578105 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
SKA2-203ENST00000578105 JPH4Q96JJ6 628 aa11.94□□□□□ -0.5
SKA2-203ENST00000578105 ABCA8O94911 1581 aa11.93□□□□□ -0.5
SKA2-203ENST00000578105 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
SKA2-203ENST00000578105 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
SKA2-203ENST00000578105 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
SKA2-203ENST00000578105 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
SKA2-203ENST00000578105 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
SKA2-203ENST00000578105 DAPK1P53355 1430 aa11.88□□□□□ -0.51
SKA2-203ENST00000578105 KCNA4P22459 653 aa11.88□□□□□ -0.51
SKA2-203ENST00000578105 SHROOM2Q13796 1616 aa11.88□□□□□ -0.51
SKA2-203ENST00000578105 KIF14Q15058 1648 aa11.87□□□□□ -0.51
SKA2-203ENST00000578105 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
SKA2-203ENST00000578105 ADGRL2O95490 1459 aa11.86□□□□□ -0.51
SKA2-203ENST00000578105 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
SKA2-203ENST00000578105 ADGBQ8N7X0 1667 aa11.85□□□□□ -0.51
SKA2-203ENST00000578105 FBLN2P98095 1184 aa11.85□□□□□ -0.51
SKA2-203ENST00000578105 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
SKA2-203ENST00000578105 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
SKA2-203ENST00000578105 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
SKA2-203ENST00000578105 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
SKA2-203ENST00000578105 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
SKA2-203ENST00000578105 GPATCH8Q9UKJ3 1502 aaKnown RBP11.84□□□□□ -0.51
SKA2-203ENST00000578105 ABCC5O15440 1437 aa11.84□□□□□ -0.51
SKA2-203ENST00000578105 PPP1R15AO75807 674 aaPredicted RBP11.83□□□□□ -0.52
SKA2-203ENST00000578105 PTPRGP23470 1445 aa11.83□□□□□ -0.52
SKA2-203ENST00000578105 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
SKA2-203ENST00000578105 CHD1O14646 1710 aa11.83□□□□□ -0.52
SKA2-203ENST00000578105 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
SKA2-203ENST00000578105 CROCC2H7BZ55 1655 aa11.82□□□□□ -0.52
SKA2-203ENST00000578105 MAMSTRQ6ZN01 415 aa11.82□□□□□ -0.52
SKA2-203ENST00000578105 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
SKA2-203ENST00000578105 ATP10BO94823 1461 aa11.82□□□□□ -0.52
SKA2-203ENST00000578105 ABCC10Q5T3U5 1492 aa11.82□□□□□ -0.52
SKA2-203ENST00000578105 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
SKA2-203ENST00000578105 CFDP1Q9UEE9 299 aaPredicted RBP11.8□□□□□ -0.52
SKA2-203ENST00000578105 ARHGEF5Q12774 1597 aa11.79□□□□□ -0.52
SKA2-203ENST00000578105 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
SKA2-203ENST00000578105 CDC42BPAQ5VT25 1732 aa11.78□□□□□ -0.52
SKA2-203ENST00000578105 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
SKA2-203ENST00000578105 SIN3AQ96ST3 1273 aa11.77□□□□□ -0.53
SKA2-203ENST00000578105 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
SKA2-203ENST00000578105 UHRF1BP1LA0JNW5 1464 aa11.76□□□□□ -0.53
SKA2-203ENST00000578105 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
SKA2-203ENST00000578105 MIER1Q8N108 512 aa11.76□□□□□ -0.53
SKA2-203ENST00000578105 RRP7BPQ9NSQ0 103 aa11.76□□□□□ -0.53
SKA2-203ENST00000578105 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms