RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ZNF644Q9H582 1327 aaPredicted RBP27.77■■■□□ 2.04
PRKCA-203ENST00000578063 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.04
PRKCA-203ENST00000578063 DAPK1P53355 1430 aa27.75■■■□□ 2.03
PRKCA-203ENST00000578063 ARHGAP5Q13017 1502 aa27.74■■■□□ 2.03
PRKCA-203ENST00000578063 ZNF777Q9ULD5 760 aaPredicted RBP27.74■■■□□ 2.03
PRKCA-203ENST00000578063 PLCH2O75038 1416 aa27.74■■■□□ 2.03
PRKCA-203ENST00000578063 ABCA9Q8IUA7 1624 aa27.73■■■□□ 2.03
PRKCA-203ENST00000578063 SETD5Q9C0A6 1442 aa27.73■■■□□ 2.03
PRKCA-203ENST00000578063 MAPKBP1O60336 1514 aa27.73■■■□□ 2.03
PRKCA-203ENST00000578063 ARAP3Q8WWN8 1544 aa27.73■■■□□ 2.03
PRKCA-203ENST00000578063 ABCC5O15440 1437 aa27.72■■■□□ 2.03
PRKCA-203ENST00000578063 AKNAQ7Z591 1439 aa27.71■■■□□ 2.03
PRKCA-203ENST00000578063 HFM1A2PYH4 1435 aa27.7■■■□□ 2.03
PRKCA-203ENST00000578063 HRCP23327 699 aa27.7■■■□□ 2.03
PRKCA-203ENST00000578063 SAMD9LQ8IVG5 1584 aa27.7■■■□□ 2.02
PRKCA-203ENST00000578063 RAB3GAP2Q9H2M9 1393 aa27.68■■■□□ 2.02
PRKCA-203ENST00000578063 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
PRKCA-203ENST00000578063 PLEKHH2Q8IVE3 1493 aa27.67■■■□□ 2.02
PRKCA-203ENST00000578063 ARHGEF5Q12774 1597 aa27.66■■■□□ 2.02
PRKCA-203ENST00000578063 ROCK1Q13464 1354 aa27.65■■■□□ 2.02
PRKCA-203ENST00000578063 CROCC2H7BZ55 1655 aa27.64■■■□□ 2.02
PRKCA-203ENST00000578063 SHANK2Q9UPX8 1470 aa27.63■■■□□ 2.01
PRKCA-203ENST00000578063 EFCAB2Q5VUJ9 269 aa27.63■■■□□ 2.01
PRKCA-203ENST00000578063 NAIPQ13075 1403 aa27.62■■■□□ 2.01
PRKCA-203ENST00000578063 KIAA1107Q9UPP5 1409 aa27.62■■■□□ 2.01
PRKCA-203ENST00000578063 MBD5Q9P267 1494 aa27.61■■■□□ 2.01
PRKCA-203ENST00000578063 GCC2Q8IWJ2 1684 aa27.6■■■□□ 2.01
PRKCA-203ENST00000578063 RSPH4AQ5TD94 716 aa27.59■■■□□ 2.01
PRKCA-203ENST00000578063 CHIC2Q9UKJ5 165 aa27.59■■■□□ 2.01
PRKCA-203ENST00000578063 CCDC141Q6ZP82 1450 aa27.59■■■□□ 2.01
PRKCA-203ENST00000578063 SYCP2Q9BX26 1530 aa27.59■■■□□ 2.01
PRKCA-203ENST00000578063 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
PRKCA-203ENST00000578063 ADGRL2O95490 1459 aa27.58■■■□□ 2
PRKCA-203ENST00000578063 ADGBQ8N7X0 1667 aa27.57■■■□□ 2
PRKCA-203ENST00000578063 ABCC1P33527 1531 aa27.56■■■□□ 2
PRKCA-203ENST00000578063 FANCAO15360 1455 aa27.54■■■□□ 2
PRKCA-203ENST00000578063 HNRNPMP52272 730 aaKnown RBP eCLIP27.54■■■□□ 22e-6■■■■□ 23
PRKCA-203ENST00000578063 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
PRKCA-203ENST00000578063 RRP7BPQ9NSQ0 103 aa27.53■■■□□ 2
PRKCA-203ENST00000578063 CD109Q6YHK3 1445 aa27.52■■■□□ 2
PRKCA-203ENST00000578063 TSPY4P0CV99 314 aa27.52■■■□□ 2
PRKCA-203ENST00000578063 TSPY10P0CW01 314 aa27.52■■■□□ 2
PRKCA-203ENST00000578063 DHX57Q6P158 1386 aaKnown RBP27.52■■■□□ 2
PRKCA-203ENST00000578063 GLI2P10070 1586 aa27.51■■□□□ 1.99
PRKCA-203ENST00000578063 NCOA1Q15788 1441 aa27.5■■□□□ 1.99
PRKCA-203ENST00000578063 ANKRD30AQ9BXX3 1397 aa27.5■■□□□ 1.99
PRKCA-203ENST00000578063 ARHGEF12Q9NZN5 1544 aa27.49■■□□□ 1.99
PRKCA-203ENST00000578063 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
PRKCA-203ENST00000578063 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
PRKCA-203ENST00000578063 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.99
PRKCA-203ENST00000578063 ACIN1Q9UKV3 1341 aaKnown RBP27.45■■□□□ 1.98
PRKCA-203ENST00000578063 DIP2BQ9P265 1576 aa27.44■■□□□ 1.98
PRKCA-203ENST00000578063 MAP3K4Q9Y6R4 1608 aa27.43■■□□□ 1.98
PRKCA-203ENST00000578063 ADGRL1O94910 1474 aa27.43■■□□□ 1.98
PRKCA-203ENST00000578063 TRAPPC8Q9Y2L5 1435 aa27.39■■□□□ 1.98
PRKCA-203ENST00000578063 KDM6BO15054 1643 aa27.38■■□□□ 1.97
PRKCA-203ENST00000578063 NEO1Q92859 1461 aa27.38■■□□□ 1.97
PRKCA-203ENST00000578063 PLXNC1O60486 1568 aa27.37■■□□□ 1.97
PRKCA-203ENST00000578063 SCAPERQ9BY12 1400 aa27.37■■□□□ 1.97
PRKCA-203ENST00000578063 DNAJC5Q9H3Z4 198 aa27.36■■□□□ 1.97
PRKCA-203ENST00000578063 KIF15Q9NS87 1388 aa27.36■■□□□ 1.97
PRKCA-203ENST00000578063 FAM69CQ0P6D2 419 aa27.34■■□□□ 1.97
PRKCA-203ENST00000578063 ANKRD50Q9ULJ7 1429 aa27.34■■□□□ 1.97
PRKCA-203ENST00000578063 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.96
PRKCA-203ENST00000578063 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
PRKCA-203ENST00000578063 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
PRKCA-203ENST00000578063 SPAG9O60271 1321 aaKnown RBP27.29■■□□□ 1.96
PRKCA-203ENST00000578063 AFAP1Q8N556 730 aa27.27■■□□□ 1.96
PRKCA-203ENST00000578063 POGZQ7Z3K3 1410 aa27.27■■□□□ 1.96
PRKCA-203ENST00000578063 INO80Q9ULG1 1556 aaPredicted RBP27.27■■□□□ 1.96
PRKCA-203ENST00000578063 DUOX2Q9NRD8 1548 aa27.25■■□□□ 1.95
PRKCA-203ENST00000578063 TRIM52Q96A61 297 aa27.25■■□□□ 1.95
PRKCA-203ENST00000578063 ATP7AQ04656 1500 aa27.25■■□□□ 1.95
PRKCA-203ENST00000578063 TEX14Q8IWB6 1497 aa27.24■■□□□ 1.95
PRKCA-203ENST00000578063 KDM5CP41229 1560 aa27.22■■□□□ 1.95
PRKCA-203ENST00000578063 ERBINQ96RT1 1412 aa27.21■■□□□ 1.95
PRKCA-203ENST00000578063 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
PRKCA-203ENST00000578063 KIF13AQ9H1H9 1805 aa27.2■■□□□ 1.95
PRKCA-203ENST00000578063 PPRC1Q5VV67 1664 aaKnown RBP27.18■■□□□ 1.94
PRKCA-203ENST00000578063 KDM5DQ9BY66 1539 aa27.16■■□□□ 1.94
PRKCA-203ENST00000578063 MLH3Q9UHC1 1453 aa27.15■■□□□ 1.94
PRKCA-203ENST00000578063 MPHOSPH9Q99550 1183 aa27.15■■□□□ 1.94
PRKCA-203ENST00000578063 HECW2Q9P2P5 1572 aa27.13■■□□□ 1.93
PRKCA-203ENST00000578063 PZPP20742 1482 aa27.13■■□□□ 1.93
PRKCA-203ENST00000578063 KIDINS220Q9ULH0 1771 aa27.12■■□□□ 1.93
PRKCA-203ENST00000578063 UNC13BO14795 1591 aa27.12■■□□□ 1.93
PRKCA-203ENST00000578063 TSPOAP1O95153 1857 aa27.12■■□□□ 1.93
PRKCA-203ENST00000578063 MYT1LQ9UL68 1186 aa27.1■■□□□ 1.93
PRKCA-203ENST00000578063 RICTORQ6R327 1708 aa27.1■■□□□ 1.93
PRKCA-203ENST00000578063 NUP155O75694 1391 aa27.09■■□□□ 1.93
PRKCA-203ENST00000578063 SLC4A1APQ9BWU0 796 aaKnown RBP27.09■■□□□ 1.93
PRKCA-203ENST00000578063 MAGI2Q86UL8 1455 aa27.06■■□□□ 1.92
PRKCA-203ENST00000578063 RAPGEF3O95398 923 aa27.06■■□□□ 1.92
PRKCA-203ENST00000578063 DHX29Q7Z478 1369 aaKnown RBP27.05■■□□□ 1.92
PRKCA-203ENST00000578063 EIF2AK4Q9P2K8 1649 aaKnown RBP27.05■■□□□ 1.92
PRKCA-203ENST00000578063 FRMPD1Q5SYB0 1578 aa27.05■■□□□ 1.92
PRKCA-203ENST00000578063 ZMYM4Q5VZL5 1548 aa27.04■■□□□ 1.92
PRKCA-203ENST00000578063 A2MP01023 1474 aa27.01■■□□□ 1.91
PRKCA-203ENST00000578063 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
PRKCA-203ENST00000578063 IQGAP3Q86VI3 1631 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms