RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 POGZQ7Z3K3 1410 aa20.12■□□□□ 0.81
CSNK1D-206ENST00000577578 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
CSNK1D-206ENST00000577578 PREX2Q70Z35 1606 aa20.12■□□□□ 0.81
CSNK1D-206ENST00000577578 SCAPERQ9BY12 1400 aa20.11■□□□□ 0.81
CSNK1D-206ENST00000577578 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
CSNK1D-206ENST00000577578 ARHGAP5Q13017 1502 aa20.1■□□□□ 0.81
CSNK1D-206ENST00000577578 ZFYVE16Q7Z3T8 1539 aa20.08■□□□□ 0.81
CSNK1D-206ENST00000577578 CDC42BPAQ5VT25 1732 aa20.08■□□□□ 0.81
CSNK1D-206ENST00000577578 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
CSNK1D-206ENST00000577578 YEATS2Q9ULM3 1422 aa20.06■□□□□ 0.8
CSNK1D-206ENST00000577578 KDM5CP41229 1560 aa20.05■□□□□ 0.8
CSNK1D-206ENST00000577578 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
CSNK1D-206ENST00000577578 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
CSNK1D-206ENST00000577578 ABCC1P33527 1531 aa20.02■□□□□ 0.8
CSNK1D-206ENST00000577578 GPATCH8Q9UKJ3 1502 aaKnown RBP20■□□□□ 0.79
CSNK1D-206ENST00000577578 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
CSNK1D-206ENST00000577578 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
CSNK1D-206ENST00000577578 ARHGEF12Q9NZN5 1544 aa19.99■□□□□ 0.79
CSNK1D-206ENST00000577578 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
CSNK1D-206ENST00000577578 HECW2Q9P2P5 1572 aa19.98■□□□□ 0.79
CSNK1D-206ENST00000577578 PTPRMP28827 1452 aa19.98■□□□□ 0.79
CSNK1D-206ENST00000577578 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
CSNK1D-206ENST00000577578 ATP10AO60312 1499 aa19.97■□□□□ 0.79
CSNK1D-206ENST00000577578 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
CSNK1D-206ENST00000577578 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
CSNK1D-206ENST00000577578 ARID4BQ4LE39 1312 aaPredicted RBP19.96■□□□□ 0.79
CSNK1D-206ENST00000577578 SAMD9LQ8IVG5 1584 aa19.95■□□□□ 0.78
CSNK1D-206ENST00000577578 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
CSNK1D-206ENST00000577578 C9orf84Q5VXU9 1444 aa19.94■□□□□ 0.78
CSNK1D-206ENST00000577578 TRAPPC8Q9Y2L5 1435 aa19.94■□□□□ 0.78
CSNK1D-206ENST00000577578 REREQ9P2R6 1566 aa19.94■□□□□ 0.78
CSNK1D-206ENST00000577578 DIP2CQ9Y2E4 1556 aa19.93■□□□□ 0.78
CSNK1D-206ENST00000577578 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
CSNK1D-206ENST00000577578 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
CSNK1D-206ENST00000577578 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
CSNK1D-206ENST00000577578 RIMS1Q86UR5 1692 aaKnown RBP19.91■□□□□ 0.78
CSNK1D-206ENST00000577578 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
CSNK1D-206ENST00000577578 KIAA1107Q9UPP5 1409 aa19.9■□□□□ 0.78
CSNK1D-206ENST00000577578 KIDINS220Q9ULH0 1771 aa19.9■□□□□ 0.78
CSNK1D-206ENST00000577578 PLEKHH2Q8IVE3 1493 aa19.89■□□□□ 0.77
CSNK1D-206ENST00000577578 SYCP2Q9BX26 1530 aa19.89■□□□□ 0.77
CSNK1D-206ENST00000577578 FER1L4A9Z1Z3 1794 aa19.88■□□□□ 0.77
CSNK1D-206ENST00000577578 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-206ENST00000577578 SUPT6HQ7KZ85 1726 aaKnown RBP19.86■□□□□ 0.77
CSNK1D-206ENST00000577578 AGLP35573 1532 aa19.85■□□□□ 0.77
CSNK1D-206ENST00000577578 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
CSNK1D-206ENST00000577578 ZNF777Q9ULD5 760 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-206ENST00000577578 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
CSNK1D-206ENST00000577578 INO80Q9ULG1 1556 aaPredicted RBP19.82■□□□□ 0.76
CSNK1D-206ENST00000577578 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
CSNK1D-206ENST00000577578 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.766e-7■□□□□ 10
CSNK1D-206ENST00000577578 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
CSNK1D-206ENST00000577578 ATP7AQ04656 1500 aa19.79■□□□□ 0.76
CSNK1D-206ENST00000577578 MLECQ14165 292 aa19.78■□□□□ 0.76
CSNK1D-206ENST00000577578 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
CSNK1D-206ENST00000577578 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
CSNK1D-206ENST00000577578 SPAG9O60271 1321 aaKnown RBP19.77■□□□□ 0.76
CSNK1D-206ENST00000577578 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
CSNK1D-206ENST00000577578 PLXNC1O60486 1568 aa19.76■□□□□ 0.75
CSNK1D-206ENST00000577578 CAMSAP2Q08AD1 1489 aa19.73■□□□□ 0.75
CSNK1D-206ENST00000577578 ADGBQ8N7X0 1667 aa19.71■□□□□ 0.75
CSNK1D-206ENST00000577578 RTEL1-TNFRSF6BF6WH68 1400 aa19.71■□□□□ 0.75
CSNK1D-206ENST00000577578 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
CSNK1D-206ENST00000577578 A2MP01023 1474 aa19.7■□□□□ 0.74
CSNK1D-206ENST00000577578 CCDC141Q6ZP82 1450 aa19.69■□□□□ 0.74
CSNK1D-206ENST00000577578 SETD1BQ9UPS6 1966 aaKnown RBP19.69■□□□□ 0.74
CSNK1D-206ENST00000577578 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
CSNK1D-206ENST00000577578 C3P01024 1663 aa19.68■□□□□ 0.74
CSNK1D-206ENST00000577578 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
CSNK1D-206ENST00000577578 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
CSNK1D-206ENST00000577578 CNTLNQ9NXG0 1405 aa19.67■□□□□ 0.74
CSNK1D-206ENST00000577578 MROH2AA6NES4 1674 aa19.66■□□□□ 0.74
CSNK1D-206ENST00000577578 MIA2Q96PC5 1412 aa19.65■□□□□ 0.74
CSNK1D-206ENST00000577578 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.73
CSNK1D-206ENST00000577578 CEBPAP49715 358 aaPredicted RBP19.63■□□□□ 0.73
CSNK1D-206ENST00000577578 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
CSNK1D-206ENST00000577578 MAST1Q9Y2H9 1570 aa19.6■□□□□ 0.73
CSNK1D-206ENST00000577578 DHX29Q7Z478 1369 aaKnown RBP19.59■□□□□ 0.73
CSNK1D-206ENST00000577578 ESF1Q9H501 851 aaKnown RBP19.59■□□□□ 0.73
CSNK1D-206ENST00000577578 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-206ENST00000577578 HSPA2P54652 639 aa19.57■□□□□ 0.72
CSNK1D-206ENST00000577578 APLP2Q06481 763 aa19.57■□□□□ 0.72
CSNK1D-206ENST00000577578 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
CSNK1D-206ENST00000577578 NPATQ14207 1427 aa19.56■□□□□ 0.72
CSNK1D-206ENST00000577578 UHRF1BP1Q6BDS2 1440 aa19.56■□□□□ 0.72
CSNK1D-206ENST00000577578 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
CSNK1D-206ENST00000577578 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
CSNK1D-206ENST00000577578 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
CSNK1D-206ENST00000577578 FAM135AQ9P2D6 1515 aa19.54■□□□□ 0.72
CSNK1D-206ENST00000577578 PTPN23Q9H3S7 1636 aa19.52■□□□□ 0.72
CSNK1D-206ENST00000577578 GGT6Q6P531 493 aa19.51■□□□□ 0.71
CSNK1D-206ENST00000577578 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
CSNK1D-206ENST00000577578 CROCC2H7BZ55 1655 aa19.5■□□□□ 0.71
CSNK1D-206ENST00000577578 FGD6Q6ZV73 1430 aa19.5■□□□□ 0.71
CSNK1D-206ENST00000577578 TCOF1Q13428 1488 aaKnown RBP19.49■□□□□ 0.71
CSNK1D-206ENST00000577578 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
CSNK1D-206ENST00000577578 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
CSNK1D-206ENST00000577578 RNF17Q9BXT8 1623 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-206ENST00000577578 EIF2AK4Q9P2K8 1649 aaKnown RBP19.48■□□□□ 0.71
CSNK1D-206ENST00000577578 KDM5DQ9BY66 1539 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms