RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
CDH8-203ENST00000577390 MSH5O43196 834 aa11.23□□□□□ -0.61
CDH8-203ENST00000577390 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
CDH8-203ENST00000577390 GOLGA6L1Q8N7Z2 621 aa11.23□□□□□ -0.61
CDH8-203ENST00000577390 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDH8-203ENST00000577390 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
CDH8-203ENST00000577390 CTDP1Q9Y5B0 961 aaPredicted RBP11.22□□□□□ -0.61
CDH8-203ENST00000577390 MARCH6O60337 910 aa11.22□□□□□ -0.61
CDH8-203ENST00000577390 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.21□□□□□ -0.62
CDH8-203ENST00000577390 SOX12O15370 315 aa11.2□□□□□ -0.62
CDH8-203ENST00000577390 CCER2I3L3R5 266 aa11.19□□□□□ -0.62
CDH8-203ENST00000577390 RAD21O60216 631 aa11.19□□□□□ -0.62
CDH8-203ENST00000577390 MSNP26038 577 aaKnown RBP11.18□□□□□ -0.62
CDH8-203ENST00000577390 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
CDH8-203ENST00000577390 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
CDH8-203ENST00000577390 MTERF4Q7Z6M4 381 aaKnown RBP11.17□□□□□ -0.62
CDH8-203ENST00000577390 FRAT2O75474 233 aaPredicted RBP11.17□□□□□ -0.62
CDH8-203ENST00000577390 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
CDH8-203ENST00000577390 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
CDH8-203ENST00000577390 CCDC97Q96F63 343 aaPredicted RBP11.16□□□□□ -0.62
CDH8-203ENST00000577390 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.62
CDH8-203ENST00000577390 ARID3AQ99856 593 aa11.15□□□□□ -0.62
CDH8-203ENST00000577390 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
CDH8-203ENST00000577390 APPP05067 770 aa11.14□□□□□ -0.63
CDH8-203ENST00000577390 TPM2P07951 284 aa11.14□□□□□ -0.63
CDH8-203ENST00000577390 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
CDH8-203ENST00000577390 TPM4P67936 248 aa11.14□□□□□ -0.63
CDH8-203ENST00000577390 CHMP3Q9Y3E7 222 aa11.14□□□□□ -0.63
CDH8-203ENST00000577390 GTF2E1P29083 439 aaPredicted RBP11.13□□□□□ -0.63
CDH8-203ENST00000577390 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
CDH8-203ENST00000577390 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
CDH8-203ENST00000577390 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
CDH8-203ENST00000577390 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
CDH8-203ENST00000577390 GORABQ5T7V8 394 aa11.12□□□□□ -0.63
CDH8-203ENST00000577390 CFAP53Q96M91 514 aa11.11□□□□□ -0.63
CDH8-203ENST00000577390 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
CDH8-203ENST00000577390 CSB-PGBD3P0DP91 1061 aa11.1□□□□□ -0.63
CDH8-203ENST00000577390 ABCC9O60706 1549 aa11.1□□□□□ -0.63
CDH8-203ENST00000577390 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
CDH8-203ENST00000577390 TONSLQ96HA7 1378 aa11.09□□□□□ -0.63
CDH8-203ENST00000577390 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
CDH8-203ENST00000577390 TCERG1O14776 1098 aaKnown RBP11.09□□□□□ -0.63
CDH8-203ENST00000577390 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
CDH8-203ENST00000577390 CCAR1Q8IX12 1150 aaKnown RBP11.08□□□□□ -0.64
CDH8-203ENST00000577390 CCDC34Q96HJ3 373 aa11.08□□□□□ -0.64
CDH8-203ENST00000577390 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
CDH8-203ENST00000577390 C11orf95C9JLR9 678 aaPredicted RBP11.07□□□□□ -0.64
CDH8-203ENST00000577390 MCCP23508 829 aa11.07□□□□□ -0.64
CDH8-203ENST00000577390 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
CDH8-203ENST00000577390 POGKQ9P215 609 aa11.07□□□□□ -0.64
CDH8-203ENST00000577390 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.07□□□□□ -0.64
CDH8-203ENST00000577390 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
CDH8-203ENST00000577390 R3HCC1Q9Y3T6 440 aaKnown RBP11.06□□□□□ -0.64
CDH8-203ENST00000577390 CCDC43Q96MW1 224 aaKnown RBP11.06□□□□□ -0.64
CDH8-203ENST00000577390 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
CDH8-203ENST00000577390 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
CDH8-203ENST00000577390 TPM3P06753 285 aa11.05□□□□□ -0.64
CDH8-203ENST00000577390 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
CDH8-203ENST00000577390 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
CDH8-203ENST00000577390 KCNH8Q96L42 1107 aa11.03□□□□□ -0.64
CDH8-203ENST00000577390 PPP1R1BQ9UD71 204 aaPredicted RBP11.03□□□□□ -0.64
CDH8-203ENST00000577390 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
CDH8-203ENST00000577390 MAP3K9P80192 1104 aa11.02□□□□□ -0.64
CDH8-203ENST00000577390 TPD52L1Q16890 204 aaPredicted RBP11.02□□□□□ -0.64
CDH8-203ENST00000577390 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.64
CDH8-203ENST00000577390 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
CDH8-203ENST00000577390 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
CDH8-203ENST00000577390 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
CDH8-203ENST00000577390 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
CDH8-203ENST00000577390 CT47A1Q5JQC4 288 aaPredicted RBP11□□□□□ -0.65
CDH8-203ENST00000577390 ZFYVE27Q5T4F4 411 aa11□□□□□ -0.65
CDH8-203ENST00000577390 PDCL3Q9H2J4 239 aa11□□□□□ -0.65
CDH8-203ENST00000577390 FAM13BQ9NYF5 915 aa11□□□□□ -0.65
CDH8-203ENST00000577390 APBB1O00213 710 aa11□□□□□ -0.65
CDH8-203ENST00000577390 MLECQ14165 292 aa11□□□□□ -0.65
CDH8-203ENST00000577390 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
CDH8-203ENST00000577390 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
CDH8-203ENST00000577390 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
CDH8-203ENST00000577390 U2SURPO15042 1029 aaKnown RBP10.99□□□□□ -0.65
CDH8-203ENST00000577390 TSPY4P0CV99 314 aa10.99□□□□□ -0.65
CDH8-203ENST00000577390 TSPY10P0CW01 314 aa10.99□□□□□ -0.65
CDH8-203ENST00000577390 SEPT11Q9NVA2 429 aaKnown RBP10.99□□□□□ -0.65
CDH8-203ENST00000577390 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
CDH8-203ENST00000577390 CALD1Q05682 793 aaKnown RBP10.98□□□□□ -0.65
CDH8-203ENST00000577390 SRPK2P78362 688 aaKnown RBP10.98□□□□□ -0.65
CDH8-203ENST00000577390 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
CDH8-203ENST00000577390 NUDCQ9Y266 331 aa10.96□□□□□ -0.65
CDH8-203ENST00000577390 CCAR2Q8N163 923 aaKnown RBP10.96□□□□□ -0.65
CDH8-203ENST00000577390 NFKBIBQ15653 356 aa10.96□□□□□ -0.66
CDH8-203ENST00000577390 HTATSF1O43719 755 aaKnown RBP10.96□□□□□ -0.66
CDH8-203ENST00000577390 NOL10Q9BSC4 688 aaKnown RBP10.95□□□□□ -0.66
CDH8-203ENST00000577390 CHMP4BQ9H444 224 aaKnown RBP10.95□□□□□ -0.66
CDH8-203ENST00000577390 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
CDH8-203ENST00000577390 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
CDH8-203ENST00000577390 MS4A1P11836 297 aa10.95□□□□□ -0.66
CDH8-203ENST00000577390 PCMTD1Q96MG8 357 aaPredicted RBP10.94□□□□□ -0.66
CDH8-203ENST00000577390 ZNF771Q7L3S4 317 aaPredicted RBP10.94□□□□□ -0.66
CDH8-203ENST00000577390 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
CDH8-203ENST00000577390 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
CDH8-203ENST00000577390 RGS3P49796 1198 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms