RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
CDH8-203ENST00000577390 MYT1Q01538 1121 aa14.98□□□□□ -0.01
CDH8-203ENST00000577390 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
CDH8-203ENST00000577390 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
CDH8-203ENST00000577390 ERICH6Q7L0X2 663 aa13.96□□□□□ -0.18
CDH8-203ENST00000577390 FAM9AQ8IZU1 332 aaPredicted RBP13.92□□□□□ -0.18
CDH8-203ENST00000577390 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
CDH8-203ENST00000577390 CCER1Q8TC90 406 aaPredicted RBP13.7□□□□□ -0.22
CDH8-203ENST00000577390 APLP2Q06481 763 aa13.64□□□□□ -0.23
CDH8-203ENST00000577390 HRCP23327 699 aa13.59□□□□□ -0.23
CDH8-203ENST00000577390 CENPBP07199 599 aaPredicted RBP13.56□□□□□ -0.24
CDH8-203ENST00000577390 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
CDH8-203ENST00000577390 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
CDH8-203ENST00000577390 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
CDH8-203ENST00000577390 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
CDH8-203ENST00000577390 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
CDH8-203ENST00000577390 CHIC1Q5VXU3 224 aa13.33□□□□□ -0.28
CDH8-203ENST00000577390 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
CDH8-203ENST00000577390 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
CDH8-203ENST00000577390 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
CDH8-203ENST00000577390 NEFLP07196 543 aa13.15□□□□□ -0.3
CDH8-203ENST00000577390 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
CDH8-203ENST00000577390 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
CDH8-203ENST00000577390 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
CDH8-203ENST00000577390 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
CDH8-203ENST00000577390 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
CDH8-203ENST00000577390 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
CDH8-203ENST00000577390 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
CDH8-203ENST00000577390 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
CDH8-203ENST00000577390 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
CDH8-203ENST00000577390 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
CDH8-203ENST00000577390 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
CDH8-203ENST00000577390 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
CDH8-203ENST00000577390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
CDH8-203ENST00000577390 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
CDH8-203ENST00000577390 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
CDH8-203ENST00000577390 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
CDH8-203ENST00000577390 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
CDH8-203ENST00000577390 CCDC180Q9P1Z9 1646 aa12.67□□□□□ -0.38
CDH8-203ENST00000577390 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CDH8-203ENST00000577390 BCANQ96GW7 911 aa12.63□□□□□ -0.39
CDH8-203ENST00000577390 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
CDH8-203ENST00000577390 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
CDH8-203ENST00000577390 DIEXFQ68CQ4 756 aaKnown RBP12.61□□□□□ -0.39
CDH8-203ENST00000577390 CDK11BP21127 795 aaKnown RBP12.59□□□□□ -0.39
CDH8-203ENST00000577390 CDK11AQ9UQ88 783 aaPredicted RBP12.59□□□□□ -0.39
CDH8-203ENST00000577390 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
CDH8-203ENST00000577390 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
CDH8-203ENST00000577390 UBTFP17480 764 aaKnown RBP12.52□□□□□ -0.41
CDH8-203ENST00000577390 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
CDH8-203ENST00000577390 DCAF1Q9Y4B6 1507 aa12.5□□□□□ -0.41
CDH8-203ENST00000577390 A0A0G2JS52 829 aa12.48□□□□□ -0.41
CDH8-203ENST00000577390 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
CDH8-203ENST00000577390 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
CDH8-203ENST00000577390 ITGAEP38570 1179 aa12.45□□□□□ -0.42
CDH8-203ENST00000577390 NEFMP07197 916 aa12.37□□□□□ -0.43
CDH8-203ENST00000577390 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
CDH8-203ENST00000577390 CANXP27824 592 aaKnown RBP12.36□□□□□ -0.43
CDH8-203ENST00000577390 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
CDH8-203ENST00000577390 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
CDH8-203ENST00000577390 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
CDH8-203ENST00000577390 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
CDH8-203ENST00000577390 ERICH6BQ5W0A0 696 aa12.2□□□□□ -0.46
CDH8-203ENST00000577390 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
CDH8-203ENST00000577390 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
CDH8-203ENST00000577390 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
CDH8-203ENST00000577390 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
CDH8-203ENST00000577390 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
CDH8-203ENST00000577390 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
CDH8-203ENST00000577390 CLSTN1O94985 981 aa12.09□□□□□ -0.47
CDH8-203ENST00000577390 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
CDH8-203ENST00000577390 NPHP1O15259 732 aa12.05□□□□□ -0.48
CDH8-203ENST00000577390 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
CDH8-203ENST00000577390 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
CDH8-203ENST00000577390 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
CDH8-203ENST00000577390 ARXQ96QS3 562 aa12.01□□□□□ -0.49
CDH8-203ENST00000577390 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
CDH8-203ENST00000577390 DEKP35659 375 aaKnown RBP11.99□□□□□ -0.49
CDH8-203ENST00000577390 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
CDH8-203ENST00000577390 NBR1Q14596 966 aa11.97□□□□□ -0.49
CDH8-203ENST00000577390 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.49
CDH8-203ENST00000577390 FBLN2P98095 1184 aa11.96□□□□□ -0.5
CDH8-203ENST00000577390 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
CDH8-203ENST00000577390 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
CDH8-203ENST00000577390 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
CDH8-203ENST00000577390 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
CDH8-203ENST00000577390 C14orf37Q86TY3 774 aa11.89□□□□□ -0.51
CDH8-203ENST00000577390 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
CDH8-203ENST00000577390 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
CDH8-203ENST00000577390 FKBP8Q14318 412 aa11.88□□□□□ -0.51
CDH8-203ENST00000577390 SENP3Q9H4L4 574 aaPredicted RBP11.87□□□□□ -0.51
CDH8-203ENST00000577390 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
CDH8-203ENST00000577390 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.87□□□□□ -0.51
CDH8-203ENST00000577390 ZRSR1Q15695 479 aaKnown RBP11.86□□□□□ -0.51
CDH8-203ENST00000577390 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
CDH8-203ENST00000577390 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
CDH8-203ENST00000577390 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
CDH8-203ENST00000577390 CCDC136Q96JN2 1154 aa11.84□□□□□ -0.51
CDH8-203ENST00000577390 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
CDH8-203ENST00000577390 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms