RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
CTNS-210ENST00000576979 PTGER2P43116 358 aa11.07□□□□□ -0.64
CTNS-210ENST00000576979 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
CTNS-210ENST00000576979 LSM11P83369 360 aaKnown RBP eCLIP11.03□□□□□ -0.64
CTNS-210ENST00000576979 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
CTNS-210ENST00000576979 SOX12O15370 315 aa10.97□□□□□ -0.65
CTNS-210ENST00000576979 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
CTNS-210ENST00000576979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
CTNS-210ENST00000576979 RNF25Q96BH1 459 aaPredicted RBP10.96□□□□□ -0.65
CTNS-210ENST00000576979 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
CTNS-210ENST00000576979 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
CTNS-210ENST00000576979 PLA2G2EQ9NZK7 142 aa10.95□□□□□ -0.66
CTNS-210ENST00000576979 NUDT7P0C024 238 aa10.93□□□□□ -0.66
CTNS-210ENST00000576979 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
CTNS-210ENST00000576979 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
CTNS-210ENST00000576979 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
CTNS-210ENST00000576979 PBX2P40425 430 aa10.85□□□□□ -0.67
CTNS-210ENST00000576979 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
CTNS-210ENST00000576979 C2orf72A6NCS6 295 aa10.84□□□□□ -0.67
CTNS-210ENST00000576979 KIF3CO14782 793 aa10.84□□□□□ -0.67
CTNS-210ENST00000576979 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
CTNS-210ENST00000576979 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
CTNS-210ENST00000576979 NLRP6P59044 892 aa10.81□□□□□ -0.68
CTNS-210ENST00000576979 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
CTNS-210ENST00000576979 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
CTNS-210ENST00000576979 MFRPQ9BY79 579 aa10.77□□□□□ -0.69
CTNS-210ENST00000576979 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
CTNS-210ENST00000576979 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
CTNS-210ENST00000576979 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
CTNS-210ENST00000576979 SLC34A2O95436 690 aa10.73□□□□□ -0.69
CTNS-210ENST00000576979 PSEN2P49810 448 aa10.72□□□□□ -0.69
CTNS-210ENST00000576979 STK24Q9Y6E0 443 aa10.71□□□□□ -0.69
CTNS-210ENST00000576979 HRO43593 1189 aa10.7□□□□□ -0.7
CTNS-210ENST00000576979 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
CTNS-210ENST00000576979 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
CTNS-210ENST00000576979 TMC2Q8TDI7 906 aa10.65□□□□□ -0.7
CTNS-210ENST00000576979 TK2O00142 265 aa10.64□□□□□ -0.71
CTNS-210ENST00000576979 STK25O00506 426 aa10.61□□□□□ -0.71
CTNS-210ENST00000576979 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
CTNS-210ENST00000576979 PPP1R37O75864 691 aa10.59□□□□□ -0.71
CTNS-210ENST00000576979 PTPN5P54829 565 aa10.58□□□□□ -0.72
CTNS-210ENST00000576979 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
CTNS-210ENST00000576979 KCNK17Q96T54 332 aa10.55□□□□□ -0.72
CTNS-210ENST00000576979 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
CTNS-210ENST00000576979 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
CTNS-210ENST00000576979 IRX2Q9BZI1 471 aaPredicted RBP10.53□□□□□ -0.72
CTNS-210ENST00000576979 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
CTNS-210ENST00000576979 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
CTNS-210ENST00000576979 PLPP6Q8IY26 295 aa10.49□□□□□ -0.73
CTNS-210ENST00000576979 A0A0G2JS52 829 aa10.46□□□□□ -0.73
CTNS-210ENST00000576979 RGS20O76081 388 aa10.45□□□□□ -0.74
CTNS-210ENST00000576979 FOXK1P85037 733 aa10.45□□□□□ -0.74
CTNS-210ENST00000576979 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
CTNS-210ENST00000576979 DSG2Q14126 1118 aa10.44□□□□□ -0.74
CTNS-210ENST00000576979 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
CTNS-210ENST00000576979 RGL2O15211 777 aa10.42□□□□□ -0.74
CTNS-210ENST00000576979 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
CTNS-210ENST00000576979 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
CTNS-210ENST00000576979 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
CTNS-210ENST00000576979 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
CTNS-210ENST00000576979 ZNF454Q8N9F8 522 aa10.39□□□□□ -0.75
CTNS-210ENST00000576979 TBC1D12O60347 775 aa10.38□□□□□ -0.75
CTNS-210ENST00000576979 UPF1Q92900 1129 aaKnown RBP eCLIP10.37□□□□□ -0.75
CTNS-210ENST00000576979 WNT2BQ93097 391 aa10.37□□□□□ -0.75
CTNS-210ENST00000576979 BCL2L12Q9HB09 334 aa10.36□□□□□ -0.75
CTNS-210ENST00000576979 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
CTNS-210ENST00000576979 GOLGA8CPA6NN73 597 aa10.34□□□□□ -0.75
CTNS-210ENST00000576979 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
CTNS-210ENST00000576979 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
CTNS-210ENST00000576979 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
CTNS-210ENST00000576979 PKD2Q13563 968 aa10.31□□□□□ -0.76
CTNS-210ENST00000576979 Q6ZNB5 142 aa10.31□□□□□ -0.76
CTNS-210ENST00000576979 FOSBP53539 338 aa10.3□□□□□ -0.76
CTNS-210ENST00000576979 PTPREP23469 700 aa10.29□□□□□ -0.76
CTNS-210ENST00000576979 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
CTNS-210ENST00000576979 ADAM33Q9BZ11 813 aa10.26□□□□□ -0.77
CTNS-210ENST00000576979 LCE2BO14633 110 aa10.23□□□□□ -0.77
CTNS-210ENST00000576979 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
CTNS-210ENST00000576979 NBPF3Q9H094 633 aa10.22□□□□□ -0.77
CTNS-210ENST00000576979 BCAMP50895 628 aa10.21□□□□□ -0.77
CTNS-210ENST00000576979 JPH4Q96JJ6 628 aa10.2□□□□□ -0.78
CTNS-210ENST00000576979 PROX2Q3B8N5 592 aa10.19□□□□□ -0.78
CTNS-210ENST00000576979 ZDHHC16Q969W1 377 aa10.19□□□□□ -0.78
CTNS-210ENST00000576979 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
CTNS-210ENST00000576979 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
CTNS-210ENST00000576979 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
CTNS-210ENST00000576979 EVI5O60447 810 aa10.17□□□□□ -0.78
CTNS-210ENST00000576979 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
CTNS-210ENST00000576979 COL9A1P20849 921 aa10.15□□□□□ -0.78
CTNS-210ENST00000576979 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
CTNS-210ENST00000576979 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
CTNS-210ENST00000576979 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
CTNS-210ENST00000576979 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
CTNS-210ENST00000576979 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
CTNS-210ENST00000576979 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
CTNS-210ENST00000576979 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
CTNS-210ENST00000576979 KCNC4Q03721 635 aa10.09□□□□□ -0.79
CTNS-210ENST00000576979 PCDHGA10Q9Y5H3 936 aa10.08□□□□□ -0.8
CTNS-210ENST00000576979 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
CTNS-210ENST00000576979 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms