RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
CTNS-210ENST00000576979 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
CTNS-210ENST00000576979 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
CTNS-210ENST00000576979 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
CTNS-210ENST00000576979 FOXD1Q16676 465 aa20.97■□□□□ 0.95
CTNS-210ENST00000576979 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
CTNS-210ENST00000576979 MSH5O43196 834 aa19.69■□□□□ 0.74
CTNS-210ENST00000576979 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
CTNS-210ENST00000576979 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
CTNS-210ENST00000576979 ADRA2BP18089 450 aa19.17■□□□□ 0.66
CTNS-210ENST00000576979 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
CTNS-210ENST00000576979 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
CTNS-210ENST00000576979 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
CTNS-210ENST00000576979 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
CTNS-210ENST00000576979 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
CTNS-210ENST00000576979 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
CTNS-210ENST00000576979 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
CTNS-210ENST00000576979 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
CTNS-210ENST00000576979 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
CTNS-210ENST00000576979 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
CTNS-210ENST00000576979 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
CTNS-210ENST00000576979 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
CTNS-210ENST00000576979 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
CTNS-210ENST00000576979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
CTNS-210ENST00000576979 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
CTNS-210ENST00000576979 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
CTNS-210ENST00000576979 POTEHQ6S545 545 aa15.7■□□□□ 0.1
CTNS-210ENST00000576979 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
CTNS-210ENST00000576979 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
CTNS-210ENST00000576979 DSG3P32926 999 aa15.6■□□□□ 0.09
CTNS-210ENST00000576979 CAPN15O75808 1086 aa15.57■□□□□ 0.08
CTNS-210ENST00000576979 ABCB7O75027 752 aa15.24■□□□□ 0.03
CTNS-210ENST00000576979 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
CTNS-210ENST00000576979 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
CTNS-210ENST00000576979 KCNA4P22459 653 aa15.09■□□□□ 0.01
CTNS-210ENST00000576979 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
CTNS-210ENST00000576979 APLP2Q06481 763 aa14.97□□□□□ -0.01
CTNS-210ENST00000576979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
CTNS-210ENST00000576979 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
CTNS-210ENST00000576979 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
CTNS-210ENST00000576979 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
CTNS-210ENST00000576979 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
CTNS-210ENST00000576979 POLA2Q14181 598 aa14.68□□□□□ -0.06
CTNS-210ENST00000576979 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
CTNS-210ENST00000576979 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
CTNS-210ENST00000576979 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
CTNS-210ENST00000576979 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
CTNS-210ENST00000576979 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
CTNS-210ENST00000576979 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
CTNS-210ENST00000576979 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
CTNS-210ENST00000576979 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
CTNS-210ENST00000576979 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
CTNS-210ENST00000576979 HAX1O00165 279 aa14.18□□□□□ -0.14
CTNS-210ENST00000576979 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
CTNS-210ENST00000576979 FXR2P51116 673 aaKnown RBP eCLIP14.12□□□□□ -0.15
CTNS-210ENST00000576979 EVX2Q03828 476 aa14.08□□□□□ -0.16
CTNS-210ENST00000576979 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
CTNS-210ENST00000576979 ZBTB22O15209 634 aa13.91□□□□□ -0.18
CTNS-210ENST00000576979 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
CTNS-210ENST00000576979 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
CTNS-210ENST00000576979 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
CTNS-210ENST00000576979 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
CTNS-210ENST00000576979 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
CTNS-210ENST00000576979 FBLN2P98095 1184 aa13.7□□□□□ -0.22
CTNS-210ENST00000576979 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
CTNS-210ENST00000576979 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
CTNS-210ENST00000576979 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
CTNS-210ENST00000576979 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
CTNS-210ENST00000576979 GABBR2O75899 941 aa13.64□□□□□ -0.23
CTNS-210ENST00000576979 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
CTNS-210ENST00000576979 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
CTNS-210ENST00000576979 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
CTNS-210ENST00000576979 LHX8Q68G74 356 aa13.57□□□□□ -0.24
CTNS-210ENST00000576979 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
CTNS-210ENST00000576979 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
CTNS-210ENST00000576979 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTNS-210ENST00000576979 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
CTNS-210ENST00000576979 FARP1Q9Y4F1 1045 aaPredicted RBP13.27□□□□□ -0.29
CTNS-210ENST00000576979 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
CTNS-210ENST00000576979 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
CTNS-210ENST00000576979 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CTNS-210ENST00000576979 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
CTNS-210ENST00000576979 CLCN6P51797 869 aa13.04□□□□□ -0.32
CTNS-210ENST00000576979 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
CTNS-210ENST00000576979 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
CTNS-210ENST00000576979 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
CTNS-210ENST00000576979 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
CTNS-210ENST00000576979 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
CTNS-210ENST00000576979 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
CTNS-210ENST00000576979 POTEMA6NI47 508 aa12.82□□□□□ -0.36
CTNS-210ENST00000576979 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
CTNS-210ENST00000576979 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
CTNS-210ENST00000576979 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
CTNS-210ENST00000576979 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
CTNS-210ENST00000576979 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
CTNS-210ENST00000576979 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
CTNS-210ENST00000576979 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
CTNS-210ENST00000576979 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
CTNS-210ENST00000576979 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
CTNS-210ENST00000576979 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms