RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 SCAPERQ9BY12 1400 aa19.98■□□□□ 0.79
PRPF8-215ENST00000576958 LMTK3Q96Q04 1460 aa19.97■□□□□ 0.79
PRPF8-215ENST00000576958 POGZQ7Z3K3 1410 aa19.96■□□□□ 0.79
PRPF8-215ENST00000576958 MLECQ14165 292 aa19.96■□□□□ 0.79
PRPF8-215ENST00000576958 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
PRPF8-215ENST00000576958 MYO5CQ9NQX4 1742 aa19.94■□□□□ 0.78
PRPF8-215ENST00000576958 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
PRPF8-215ENST00000576958 HSPA2P54652 639 aa19.92■□□□□ 0.78
PRPF8-215ENST00000576958 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
PRPF8-215ENST00000576958 FER1L4A9Z1Z3 1794 aa19.88■□□□□ 0.77
PRPF8-215ENST00000576958 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
PRPF8-215ENST00000576958 AFAP1Q8N556 730 aa19.87■□□□□ 0.77
PRPF8-215ENST00000576958 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
PRPF8-215ENST00000576958 MAGI2Q86UL8 1455 aa19.85■□□□□ 0.77
PRPF8-215ENST00000576958 EFCAB2Q5VUJ9 269 aa19.84■□□□□ 0.77
PRPF8-215ENST00000576958 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
PRPF8-215ENST00000576958 CEBPAP49715 358 aaPredicted RBP19.83■□□□□ 0.77
PRPF8-215ENST00000576958 ATP10AO60312 1499 aa19.83■□□□□ 0.76
PRPF8-215ENST00000576958 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
PRPF8-215ENST00000576958 KDM5CP41229 1560 aa19.81■□□□□ 0.76
PRPF8-215ENST00000576958 DIP2CQ9Y2E4 1556 aa19.81■□□□□ 0.76
PRPF8-215ENST00000576958 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
PRPF8-215ENST00000576958 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
PRPF8-215ENST00000576958 TRAPPC8Q9Y2L5 1435 aa19.8■□□□□ 0.76
PRPF8-215ENST00000576958 CDK11AQ9UQ88 783 aaPredicted RBP19.79■□□□□ 0.76
PRPF8-215ENST00000576958 PREX2Q70Z35 1606 aa19.79■□□□□ 0.76
PRPF8-215ENST00000576958 CLIP1P30622 1438 aa19.78■□□□□ 0.76
PRPF8-215ENST00000576958 ZNF518AQ6AHZ1 1483 aa19.78■□□□□ 0.76
PRPF8-215ENST00000576958 ABCC1P33527 1531 aa19.76■□□□□ 0.75
PRPF8-215ENST00000576958 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
PRPF8-215ENST00000576958 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
PRPF8-215ENST00000576958 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
PRPF8-215ENST00000576958 MYT1LQ9UL68 1186 aa19.73■□□□□ 0.75
PRPF8-215ENST00000576958 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
PRPF8-215ENST00000576958 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
PRPF8-215ENST00000576958 KIDINS220Q9ULH0 1771 aa19.7■□□□□ 0.74
PRPF8-215ENST00000576958 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
PRPF8-215ENST00000576958 MLH3Q9UHC1 1453 aa19.68■□□□□ 0.74
PRPF8-215ENST00000576958 ZNF777Q9ULD5 760 aaPredicted RBP19.68■□□□□ 0.74
PRPF8-215ENST00000576958 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
PRPF8-215ENST00000576958 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
PRPF8-215ENST00000576958 C3P01024 1663 aa19.66■□□□□ 0.74
PRPF8-215ENST00000576958 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
PRPF8-215ENST00000576958 REREQ9P2R6 1566 aa19.66■□□□□ 0.74
PRPF8-215ENST00000576958 STRCQ7RTU9 1775 aa19.65■□□□□ 0.74
PRPF8-215ENST00000576958 HNRNPMP52272 730 aaKnown RBP eCLIP19.64■□□□□ 0.73
PRPF8-215ENST00000576958 AGLP35573 1532 aa19.6■□□□□ 0.73
PRPF8-215ENST00000576958 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
PRPF8-215ENST00000576958 ZNF644Q9H582 1327 aaPredicted RBP19.58■□□□□ 0.73
PRPF8-215ENST00000576958 CERKQ8TCT0 537 aa19.57■□□□□ 0.72
PRPF8-215ENST00000576958 UHRF1BP1Q6BDS2 1440 aa19.56■□□□□ 0.72
PRPF8-215ENST00000576958 TIAM1Q13009 1591 aa19.54■□□□□ 0.72
PRPF8-215ENST00000576958 INO80Q9ULG1 1556 aaPredicted RBP19.54■□□□□ 0.72
PRPF8-215ENST00000576958 ATP7AQ04656 1500 aa19.54■□□□□ 0.72
PRPF8-215ENST00000576958 SPAG9O60271 1321 aaKnown RBP19.53■□□□□ 0.72
PRPF8-215ENST00000576958 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
PRPF8-215ENST00000576958 CFDP1Q9UEE9 299 aaPredicted RBP19.52■□□□□ 0.72
PRPF8-215ENST00000576958 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
PRPF8-215ENST00000576958 CLTCQ00610 1675 aaKnown RBP19.5■□□□□ 0.71
PRPF8-215ENST00000576958 PLXNC1O60486 1568 aa19.5■□□□□ 0.71
PRPF8-215ENST00000576958 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
PRPF8-215ENST00000576958 SETD1BQ9UPS6 1966 aaKnown RBP19.49■□□□□ 0.71
PRPF8-215ENST00000576958 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
PRPF8-215ENST00000576958 KIAA1107Q9UPP5 1409 aa19.47■□□□□ 0.71
PRPF8-215ENST00000576958 A2MP01023 1474 aa19.47■□□□□ 0.71
PRPF8-215ENST00000576958 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
PRPF8-215ENST00000576958 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
PRPF8-215ENST00000576958 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
PRPF8-215ENST00000576958 MROH2AA6NES4 1674 aa19.44■□□□□ 0.7
PRPF8-215ENST00000576958 NCOA1Q15788 1441 aa19.43■□□□□ 0.7
PRPF8-215ENST00000576958 GGT6Q6P531 493 aa19.43■□□□□ 0.7
PRPF8-215ENST00000576958 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
PRPF8-215ENST00000576958 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
PRPF8-215ENST00000576958 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
PRPF8-215ENST00000576958 LTBP4Q8N2S1 1624 aa19.41■□□□□ 0.7
PRPF8-215ENST00000576958 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
PRPF8-215ENST00000576958 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
PRPF8-215ENST00000576958 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
PRPF8-215ENST00000576958 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
PRPF8-215ENST00000576958 PTPRTO14522 1441 aa19.39■□□□□ 0.69
PRPF8-215ENST00000576958 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
PRPF8-215ENST00000576958 NCOA2Q15596 1464 aa19.39■□□□□ 0.69
PRPF8-215ENST00000576958 NPATQ14207 1427 aa19.38■□□□□ 0.69
PRPF8-215ENST00000576958 CAMSAP2Q08AD1 1489 aa19.37■□□□□ 0.69
PRPF8-215ENST00000576958 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
PRPF8-215ENST00000576958 ZNF142P52746 1687 aaPredicted RBP19.34■□□□□ 0.69
PRPF8-215ENST00000576958 CEP170BQ9Y4F5 1589 aaPredicted RBP19.34■□□□□ 0.69
PRPF8-215ENST00000576958 ZNF335Q9H4Z2 1342 aaPredicted RBP19.32■□□□□ 0.68
PRPF8-215ENST00000576958 FBXO31Q5XUX0 539 aaPredicted RBP19.32■□□□□ 0.68
PRPF8-215ENST00000576958 CCDC141Q6ZP82 1450 aa19.31■□□□□ 0.68
PRPF8-215ENST00000576958 DHX29Q7Z478 1369 aaKnown RBP19.31■□□□□ 0.68
PRPF8-215ENST00000576958 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
PRPF8-215ENST00000576958 RTEL1-TNFRSF6BF6WH68 1400 aa19.29■□□□□ 0.68
PRPF8-215ENST00000576958 KIF3BO15066 747 aa19.29■□□□□ 0.68
PRPF8-215ENST00000576958 DNMT1P26358 1616 aaKnown RBP19.27■□□□□ 0.68
PRPF8-215ENST00000576958 TCOF1Q13428 1488 aaKnown RBP19.27■□□□□ 0.67
PRPF8-215ENST00000576958 LRRC9Q6ZRR7 1453 aa19.26■□□□□ 0.67
PRPF8-215ENST00000576958 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
PRPF8-215ENST00000576958 ILDR2Q71H61 639 aa19.25■□□□□ 0.67
PRPF8-215ENST00000576958 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms