RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 YEATS2Q9ULM3 1422 aa21.66■■□□□ 1.06
ATP2A3-215ENST00000576957 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
ATP2A3-215ENST00000576957 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
ATP2A3-215ENST00000576957 CLIP1P30622 1438 aa21.63■■□□□ 1.05
ATP2A3-215ENST00000576957 RIMS1Q86UR5 1692 aaKnown RBP21.63■■□□□ 1.05
ATP2A3-215ENST00000576957 KIF14Q15058 1648 aa21.62■■□□□ 1.05
ATP2A3-215ENST00000576957 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
ATP2A3-215ENST00000576957 LMTK3Q96Q04 1460 aa21.59■■□□□ 1.05
ATP2A3-215ENST00000576957 ATP10AO60312 1499 aa21.58■■□□□ 1.05
ATP2A3-215ENST00000576957 SIGLEC1Q9BZZ2 1709 aa21.58■■□□□ 1.05
ATP2A3-215ENST00000576957 ZNF518AQ6AHZ1 1483 aa21.57■■□□□ 1.04
ATP2A3-215ENST00000576957 LRRIQ1Q96JM4 1722 aa21.56■■□□□ 1.04
ATP2A3-215ENST00000576957 C9orf84Q5VXU9 1444 aa21.55■■□□□ 1.04
ATP2A3-215ENST00000576957 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
ATP2A3-215ENST00000576957 ARHGAP5Q13017 1502 aa21.55■■□□□ 1.04
ATP2A3-215ENST00000576957 CCDC18Q5T9S5 1454 aa21.55■■□□□ 1.04
ATP2A3-215ENST00000576957 MLECQ14165 292 aa21.53■■□□□ 1.04
ATP2A3-215ENST00000576957 KDM5CP41229 1560 aa21.52■■□□□ 1.04
ATP2A3-215ENST00000576957 FER1L4A9Z1Z3 1794 aa21.51■■□□□ 1.03
ATP2A3-215ENST00000576957 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
ATP2A3-215ENST00000576957 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
ATP2A3-215ENST00000576957 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
ATP2A3-215ENST00000576957 CDC42BPBQ9Y5S2 1711 aa21.49■■□□□ 1.03
ATP2A3-215ENST00000576957 PLPPR3Q6T4P5 718 aa21.47■■□□□ 1.03
ATP2A3-215ENST00000576957 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
ATP2A3-215ENST00000576957 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.03
ATP2A3-215ENST00000576957 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.03
ATP2A3-215ENST00000576957 REREQ9P2R6 1566 aa21.44■■□□□ 1.02
ATP2A3-215ENST00000576957 HSPA2P54652 639 aa21.44■■□□□ 1.02
ATP2A3-215ENST00000576957 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
ATP2A3-215ENST00000576957 ABCC1P33527 1531 aa21.42■■□□□ 1.02
ATP2A3-215ENST00000576957 DIP2CQ9Y2E4 1556 aa21.42■■□□□ 1.02
ATP2A3-215ENST00000576957 TRAPPC8Q9Y2L5 1435 aa21.4■■□□□ 1.02
ATP2A3-215ENST00000576957 CDC42BPAQ5VT25 1732 aa21.38■■□□□ 1.01
ATP2A3-215ENST00000576957 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
ATP2A3-215ENST00000576957 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
ATP2A3-215ENST00000576957 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
ATP2A3-215ENST00000576957 AGLP35573 1532 aa21.37■■□□□ 1.01
ATP2A3-215ENST00000576957 CEBPAP49715 358 aaPredicted RBP21.36■■□□□ 1.01
ATP2A3-215ENST00000576957 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
ATP2A3-215ENST00000576957 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
ATP2A3-215ENST00000576957 GPATCH8Q9UKJ3 1502 aaKnown RBP21.32■■□□□ 1
ATP2A3-215ENST00000576957 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
ATP2A3-215ENST00000576957 UHRF1BP1Q6BDS2 1440 aa21.3■■□□□ 1
ATP2A3-215ENST00000576957 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
ATP2A3-215ENST00000576957 SAMD9LQ8IVG5 1584 aa21.29■■□□□ 1
ATP2A3-215ENST00000576957 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
ATP2A3-215ENST00000576957 CNTLNQ9NXG0 1405 aa21.28■■□□□ 1
ATP2A3-215ENST00000576957 KIAA1107Q9UPP5 1409 aa21.28■■□□□ 1
ATP2A3-215ENST00000576957 PLEKHH2Q8IVE3 1493 aa21.27■■□□□ 1
ATP2A3-215ENST00000576957 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
ATP2A3-215ENST00000576957 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
ATP2A3-215ENST00000576957 C3P01024 1663 aa21.26■□□□□ 0.99
ATP2A3-215ENST00000576957 CFDP1Q9UEE9 299 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-215ENST00000576957 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
ATP2A3-215ENST00000576957 CCNB3Q8WWL7 1395 aa21.25■□□□□ 0.99
ATP2A3-215ENST00000576957 HNRNPMP52272 730 aaKnown RBP eCLIP21.25■□□□□ 0.99
ATP2A3-215ENST00000576957 CERKQ8TCT0 537 aa21.25■□□□□ 0.99
ATP2A3-215ENST00000576957 STRCQ7RTU9 1775 aa21.21■□□□□ 0.99
ATP2A3-215ENST00000576957 ATP7AQ04656 1500 aa21.2■□□□□ 0.98
ATP2A3-215ENST00000576957 INO80Q9ULG1 1556 aaPredicted RBP21.18■□□□□ 0.98
ATP2A3-215ENST00000576957 MROH2AA6NES4 1674 aa21.18■□□□□ 0.98
ATP2A3-215ENST00000576957 NPATQ14207 1427 aa21.17■□□□□ 0.98
ATP2A3-215ENST00000576957 EHBP1L1Q8N3D4 1523 aa21.17■□□□□ 0.98
ATP2A3-215ENST00000576957 A2MP01023 1474 aa21.16■□□□□ 0.98
ATP2A3-215ENST00000576957 PTPRTO14522 1441 aa21.16■□□□□ 0.98
ATP2A3-215ENST00000576957 SUPT6HQ7KZ85 1726 aaKnown RBP21.15■□□□□ 0.98
ATP2A3-215ENST00000576957 PLXNC1O60486 1568 aa21.15■□□□□ 0.98
ATP2A3-215ENST00000576957 ZMYM3Q14202 1370 aa21.15■□□□□ 0.98
ATP2A3-215ENST00000576957 TIAM1Q13009 1591 aa21.14■□□□□ 0.98
ATP2A3-215ENST00000576957 CEP162Q5TB80 1403 aa21.14■□□□□ 0.98
ATP2A3-215ENST00000576957 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
ATP2A3-215ENST00000576957 MBD5Q9P267 1494 aa21.11■□□□□ 0.97
ATP2A3-215ENST00000576957 ZNF644Q9H582 1327 aaPredicted RBP21.1■□□□□ 0.97
ATP2A3-215ENST00000576957 ADGBQ8N7X0 1667 aa21.1■□□□□ 0.97
ATP2A3-215ENST00000576957 RTEL1-TNFRSF6BF6WH68 1400 aa21.1■□□□□ 0.97
ATP2A3-215ENST00000576957 NCOA1Q15788 1441 aa21.09■□□□□ 0.97
ATP2A3-215ENST00000576957 GGT6Q6P531 493 aa21.07■□□□□ 0.96
ATP2A3-215ENST00000576957 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
ATP2A3-215ENST00000576957 RSPH4AQ5TD94 716 aa21.05■□□□□ 0.96
ATP2A3-215ENST00000576957 DHX29Q7Z478 1369 aaKnown RBP21.04■□□□□ 0.96
ATP2A3-215ENST00000576957 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
ATP2A3-215ENST00000576957 NCOA2Q15596 1464 aa21.03■□□□□ 0.96
ATP2A3-215ENST00000576957 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
ATP2A3-215ENST00000576957 CCDC141Q6ZP82 1450 aa21.01■□□□□ 0.95
ATP2A3-215ENST00000576957 ZNF142P52746 1687 aaPredicted RBP21■□□□□ 0.95
ATP2A3-215ENST00000576957 LTBP4Q8N2S1 1624 aa21■□□□□ 0.95
ATP2A3-215ENST00000576957 MYO3AQ8NEV4 1616 aa20.99■□□□□ 0.95
ATP2A3-215ENST00000576957 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
ATP2A3-215ENST00000576957 PLA2R1Q13018 1463 aa20.99■□□□□ 0.95
ATP2A3-215ENST00000576957 PKD2Q13563 968 aa20.98■□□□□ 0.95
ATP2A3-215ENST00000576957 IQSEC2Q5JU85 1478 aa20.98■□□□□ 0.95
ATP2A3-215ENST00000576957 CEP170BQ9Y4F5 1589 aaPredicted RBP20.97■□□□□ 0.95
ATP2A3-215ENST00000576957 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
ATP2A3-215ENST00000576957 KIF3BO15066 747 aa20.95■□□□□ 0.94
ATP2A3-215ENST00000576957 NCKAP5LQ9HCH0 1330 aa20.95■□□□□ 0.94
ATP2A3-215ENST00000576957 VPS8Q8N3P4 1428 aa20.95■□□□□ 0.94
ATP2A3-215ENST00000576957 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
ATP2A3-215ENST00000576957 ARHGEF5Q12774 1597 aa20.93■□□□□ 0.94
ATP2A3-215ENST00000576957 TSPY4P0CV99 314 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms