RNA–Protein interactions for RNA: ENST00000576872.1

CAMTA2-216, Transcript of calmodulin binding transcription activator 2, human

TSL 2

Gene CAMTA2, Length 985 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-216	ENST00000576872	ADGRL1	O94910	1474 aa		27.8	■■■□□ 2.04
CAMTA2-216	ENST00000576872	TIAM1	Q13009	1591 aa		27.79	■■■□□ 2.04
CAMTA2-216	ENST00000576872	RICTOR	Q6R327	1708 aa		27.78	■■■□□ 2.04
CAMTA2-216	ENST00000576872	CDC42BPA	Q5VT25	1732 aa		27.78	■■■□□ 2.04
CAMTA2-216	ENST00000576872	SCAPER	Q9BY12	1400 aa		27.76	■■■□□ 2.04
CAMTA2-216	ENST00000576872	GPATCH8	Q9UKJ3	1502 aa	Known RBP	27.73	■■■□□ 2.03
CAMTA2-216	ENST00000576872	POGZ	Q7Z3K3	1410 aa		27.72	■■■□□ 2.03
CAMTA2-216	ENST00000576872	MAP3K1	Q13233	1512 aa		27.7	■■■□□ 2.02
CAMTA2-216	ENST00000576872	ZMYM4	Q5VZL5	1548 aa		27.69	■■■□□ 2.02
CAMTA2-216	ENST00000576872	CCNB3	Q8WWL7	1395 aa		27.69	■■■□□ 2.02
CAMTA2-216	ENST00000576872	LRRC9	Q6ZRR7	1453 aa		27.67	■■■□□ 2.02
CAMTA2-216	ENST00000576872	ABCC1	P33527	1531 aa		27.66	■■■□□ 2.02
CAMTA2-216	ENST00000576872	SUPT6H	Q7KZ85	1726 aa	Known RBP	27.65	■■■□□ 2.02
CAMTA2-216	ENST00000576872	ARHGEF40	Q8TER5	1519 aa		27.64	■■■□□ 2.02
CAMTA2-216	ENST00000576872	KDM4F	A0A1W2PPD8	638 aa		27.64	■■■□□ 2.02
CAMTA2-216	ENST00000576872	NCOA2	Q15596	1464 aa		27.64	■■■□□ 2.01
CAMTA2-216	ENST00000576872	SAMD9L	Q8IVG5	1584 aa		27.63	■■■□□ 2.01
CAMTA2-216	ENST00000576872	ARHGEF12	Q9NZN5	1544 aa		27.62	■■■□□ 2.01
CAMTA2-216	ENST00000576872	ZNF518A	Q6AHZ1	1483 aa		27.62	■■■□□ 2.01
CAMTA2-216	ENST00000576872	CFDP1	Q9UEE9	299 aa	Predicted RBP	27.61	■■■□□ 2.01
CAMTA2-216	ENST00000576872	ZNF777	Q9ULD5	760 aa	Predicted RBP	27.61	■■■□□ 2.01
CAMTA2-216	ENST00000576872	MAGI2	Q86UL8	1455 aa		27.61	■■■□□ 2.01
CAMTA2-216	ENST00000576872	ITSN2	Q9NZM3	1697 aa		27.61	■■■□□ 2.01
CAMTA2-216	ENST00000576872	KANK4	Q5T7N3	995 aa	Predicted RBP	27.6	■■■□□ 2.01
CAMTA2-216	ENST00000576872	ZFYVE16	Q7Z3T8	1539 aa		27.6	■■■□□ 2.01
CAMTA2-216	ENST00000576872	AEBP2	Q6ZN18	517 aa	Predicted RBP	27.59	■■■□□ 2.01
CAMTA2-216	ENST00000576872	KDM5C	P41229	1560 aa		27.59	■■■□□ 2.01
CAMTA2-216	ENST00000576872	YEATS2	Q9ULM3	1422 aa		27.58	■■■□□ 2.01
CAMTA2-216	ENST00000576872	AFAP1	Q8N556	730 aa		27.58	■■■□□ 2.01
CAMTA2-216	ENST00000576872	TRAPPC8	Q9Y2L5	1435 aa		27.58	■■■□□ 2
CAMTA2-216	ENST00000576872	APLP2	Q06481	763 aa		27.55	■■■□□ 2
CAMTA2-216	ENST00000576872	SYCP2	Q9BX26	1530 aa		27.55	■■■□□ 2
CAMTA2-216	ENST00000576872	PLEKHH2	Q8IVE3	1493 aa		27.53	■■■□□ 2
CAMTA2-216	ENST00000576872	KIAA1107	Q9UPP5	1409 aa		27.52	■■■□□ 2
CAMTA2-216	ENST00000576872	HECW2	Q9P2P5	1572 aa		27.52	■■■□□ 2
CAMTA2-216	ENST00000576872	HNRNPM	P52272	730 aa	Known RBP eCLIP	27.49	■■□□□ 1.99
CAMTA2-216	ENST00000576872	MLH3	Q9UHC1	1453 aa		27.49	■■□□□ 1.99
CAMTA2-216	ENST00000576872	ZNF644	Q9H582	1327 aa	Predicted RBP	27.48	■■□□□ 1.99
CAMTA2-216	ENST00000576872	ATP10A	O60312	1499 aa		27.46	■■□□□ 1.99
CAMTA2-216	ENST00000576872	SIGLEC1	Q9BZZ2	1709 aa		27.45	■■□□□ 1.99
CAMTA2-216	ENST00000576872	ARID4B	Q4LE39	1312 aa	Predicted RBP	27.44	■■□□□ 1.98
CAMTA2-216	ENST00000576872	MYT1L	Q9UL68	1186 aa		27.44	■■□□□ 1.98
CAMTA2-216	ENST00000576872	DIP2C	Q9Y2E4	1556 aa		27.43	■■□□□ 1.98
CAMTA2-216	ENST00000576872	C9orf84	Q5VXU9	1444 aa		27.43	■■□□□ 1.98
CAMTA2-216	ENST00000576872	CAMSAP2	Q08AD1	1489 aa		27.43	■■□□□ 1.98
CAMTA2-216	ENST00000576872	ABCA6	Q8N139	1617 aa		27.42	■■□□□ 1.98
CAMTA2-216	ENST00000576872	BCORL1	Q5H9F3	1711 aa		27.42	■■□□□ 1.98
CAMTA2-216	ENST00000576872	MBD5	Q9P267	1494 aa		27.42	■■□□□ 1.98
CAMTA2-216	ENST00000576872	KIDINS220	Q9ULH0	1771 aa		27.42	■■□□□ 1.98
CAMTA2-216	ENST00000576872	MYOM3	Q5VTT5	1437 aa		27.4	■■□□□ 1.98
CAMTA2-216	ENST00000576872	ADAMTSL3	P82987	1691 aa		27.4	■■□□□ 1.98
CAMTA2-216	ENST00000576872	SPAG9	O60271	1321 aa	Known RBP	27.39	■■□□□ 1.97
CAMTA2-216	ENST00000576872	RERE	Q9P2R6	1566 aa		27.36	■■□□□ 1.97
CAMTA2-216	ENST00000576872	INO80	Q9ULG1	1556 aa	Predicted RBP	27.35	■■□□□ 1.97
CAMTA2-216	ENST00000576872	MIA2	Q96PC5	1412 aa		27.35	■■□□□ 1.97
CAMTA2-216	ENST00000576872	ATP7A	Q04656	1500 aa		27.35	■■□□□ 1.97
CAMTA2-216	ENST00000576872	CCDC141	Q6ZP82	1450 aa		27.32	■■□□□ 1.96
CAMTA2-216	ENST00000576872	MADD	Q8WXG6	1647 aa		27.32	■■□□□ 1.96
CAMTA2-216	ENST00000576872	ARHGEF5	Q12774	1597 aa		27.31	■■□□□ 1.96
CAMTA2-216	ENST00000576872	MLEC	Q14165	292 aa		27.28	■■□□□ 1.96
CAMTA2-216	ENST00000576872	RSPH4A	Q5TD94	716 aa		27.28	■■□□□ 1.96
CAMTA2-216	ENST00000576872	AGL	P35573	1532 aa		27.26	■■□□□ 1.96
CAMTA2-216	ENST00000576872	RTEL1-TNFRSF6B	F6WH68	1400 aa		27.26	■■□□□ 1.95
CAMTA2-216	ENST00000576872	PTPRM	P28827	1452 aa		27.25	■■□□□ 1.95
CAMTA2-216	ENST00000576872	FGD6	Q6ZV73	1430 aa		27.24	■■□□□ 1.95
CAMTA2-216	ENST00000576872	RIMS1	Q86UR5	1692 aa	Known RBP	27.24	■■□□□ 1.95
CAMTA2-216	ENST00000576872	PTPN23	Q9H3S7	1636 aa		27.23	■■□□□ 1.95
CAMTA2-216	ENST00000576872	A2M	P01023	1474 aa		27.21	■■□□□ 1.95
CAMTA2-216	ENST00000576872	FER1L4	A9Z1Z3	1794 aa		27.21	■■□□□ 1.95
CAMTA2-216	ENST00000576872	PLXNC1	O60486	1568 aa		27.21	■■□□□ 1.95
CAMTA2-216	ENST00000576872	ADGB	Q8N7X0	1667 aa		27.21	■■□□□ 1.95
CAMTA2-216	ENST00000576872	TCOF1	Q13428	1488 aa	Known RBP	27.19	■■□□□ 1.94
CAMTA2-216	ENST00000576872	TSPY4	P0CV99	314 aa		27.18	■■□□□ 1.94
CAMTA2-216	ENST00000576872	TSPY10	P0CW01	314 aa		27.18	■■□□□ 1.94
CAMTA2-216	ENST00000576872	MAST1	Q9Y2H9	1570 aa		27.16	■■□□□ 1.94
CAMTA2-216	ENST00000576872	DHX29	Q7Z478	1369 aa	Known RBP	27.11	■■□□□ 1.93
CAMTA2-216	ENST00000576872	ABCC5	O15440	1437 aa		27.11	■■□□□ 1.93
CAMTA2-216	ENST00000576872	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.1	■■□□□ 1.93
CAMTA2-216	ENST00000576872	DNMT1	P26358	1616 aa	Known RBP	27.09	■■□□□ 1.93
CAMTA2-216	ENST00000576872	CROCC2	H7BZ55	1655 aa		27.09	■■□□□ 1.93
CAMTA2-216	ENST00000576872	DAPK1	P53355	1430 aa		27.08	■■□□□ 1.93
CAMTA2-216	ENST00000576872	SHANK2	Q9UPX8	1470 aa		27.08	■■□□□ 1.93
CAMTA2-216	ENST00000576872	PLPPR3	Q6T4P5	718 aa		27.05	■■□□□ 1.92
CAMTA2-216	ENST00000576872	FAM50A	Q14320	339 aa	Known RBP	27.02	■■□□□ 1.92
CAMTA2-216	ENST00000576872	ESF1	Q9H501	851 aa	Known RBP	27.02	■■□□□ 1.92
CAMTA2-216	ENST00000576872	CNTLN	Q9NXG0	1405 aa		27.01	■■□□□ 1.91
CAMTA2-216	ENST00000576872	GGT6	Q6P531	493 aa		27.01	■■□□□ 1.91
CAMTA2-216	ENST00000576872	KIF3B	O15066	747 aa		26.99	■■□□□ 1.91
CAMTA2-216	ENST00000576872	CEBPA	P49715	358 aa	Predicted RBP	26.99	■■□□□ 1.91
CAMTA2-216	ENST00000576872	C3	P01024	1663 aa		26.97	■■□□□ 1.91
CAMTA2-216	ENST00000576872	KIF15	Q9NS87	1388 aa		26.96	■■□□□ 1.91
CAMTA2-216	ENST00000576872	DUOX2	Q9NRD8	1548 aa		26.95	■■□□□ 1.91
CAMTA2-216	ENST00000576872	MROH2A	A6NES4	1674 aa		26.95	■■□□□ 1.91
CAMTA2-216	ENST00000576872	CLTC	Q00610	1675 aa	Known RBP	26.95	■■□□□ 1.9
CAMTA2-216	ENST00000576872	CHIC2	Q9UKJ5	165 aa		26.94	■■□□□ 1.9
CAMTA2-216	ENST00000576872	PPP6R1	Q9UPN7	881 aa		26.94	■■□□□ 1.9
CAMTA2-216	ENST00000576872	EIF2AK4	Q9P2K8	1649 aa	Known RBP	26.93	■■□□□ 1.9
CAMTA2-216	ENST00000576872	RRP7BP	Q9NSQ0	103 aa		26.92	■■□□□ 1.9
CAMTA2-216	ENST00000576872	ANKRD30A	Q9BXX3	1397 aa		26.91	■■□□□ 1.9
CAMTA2-216	ENST00000576872	RNF17	Q9BXT8	1623 aa	Known RBP	26.9	■■□□□ 1.9

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms