RNA–Protein interactions for RNA: ENST00000575942.1

PAM16-213, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 806 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-213ENST00000575942 MAGI2Q86UL8 1455 aa22.12■■□□□ 1.13
PAM16-213ENST00000575942 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
PAM16-213ENST00000575942 CLIP1P30622 1438 aa22.11■■□□□ 1.13
PAM16-213ENST00000575942 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
PAM16-213ENST00000575942 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
PAM16-213ENST00000575942 EFCAB2Q5VUJ9 269 aa22.09■■□□□ 1.13
PAM16-213ENST00000575942 YEATS2Q9ULM3 1422 aa22.07■■□□□ 1.12
PAM16-213ENST00000575942 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
PAM16-213ENST00000575942 CCDC18Q5T9S5 1454 aa22.06■■□□□ 1.12
PAM16-213ENST00000575942 RIMS1Q86UR5 1692 aaKnown RBP22.06■■□□□ 1.12
PAM16-213ENST00000575942 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
PAM16-213ENST00000575942 ARHGAP5Q13017 1502 aa22.04■■□□□ 1.12
PAM16-213ENST00000575942 SIGLEC1Q9BZZ2 1709 aa22.02■■□□□ 1.12
PAM16-213ENST00000575942 ZNF518AQ6AHZ1 1483 aa22■■□□□ 1.11
PAM16-213ENST00000575942 CDC42BPBQ9Y5S2 1711 aa22■■□□□ 1.11
PAM16-213ENST00000575942 ILDR1Q86SU0 546 aaPredicted RBP21.99■■□□□ 1.11
PAM16-213ENST00000575942 ATP10AO60312 1499 aa21.98■■□□□ 1.11
PAM16-213ENST00000575942 FYCO1Q9BQS8 1478 aa21.98■■□□□ 1.11
PAM16-213ENST00000575942 PREX2Q70Z35 1606 aa21.97■■□□□ 1.11
PAM16-213ENST00000575942 FER1L4A9Z1Z3 1794 aa21.97■■□□□ 1.11
PAM16-213ENST00000575942 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
PAM16-213ENST00000575942 KDM5CP41229 1560 aa21.95■■□□□ 1.11
PAM16-213ENST00000575942 MLECQ14165 292 aa21.94■■□□□ 1.1
PAM16-213ENST00000575942 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
PAM16-213ENST00000575942 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
PAM16-213ENST00000575942 MYT1LQ9UL68 1186 aa21.91■■□□□ 1.1
PAM16-213ENST00000575942 CDC42BPAQ5VT25 1732 aa21.91■■□□□ 1.1
PAM16-213ENST00000575942 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
PAM16-213ENST00000575942 ABCC1P33527 1531 aa21.9■■□□□ 1.1
PAM16-213ENST00000575942 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
PAM16-213ENST00000575942 ITSN2Q9NZM3 1697 aa21.89■■□□□ 1.1
PAM16-213ENST00000575942 DIP2CQ9Y2E4 1556 aa21.87■■□□□ 1.09
PAM16-213ENST00000575942 MLH3Q9UHC1 1453 aa21.87■■□□□ 1.09
PAM16-213ENST00000575942 REREQ9P2R6 1566 aa21.86■■□□□ 1.09
PAM16-213ENST00000575942 ABCA6Q8N139 1617 aa21.84■■□□□ 1.09
PAM16-213ENST00000575942 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
PAM16-213ENST00000575942 KIDINS220Q9ULH0 1771 aa21.79■■□□□ 1.08
PAM16-213ENST00000575942 HSPA2P54652 639 aa21.79■■□□□ 1.08
PAM16-213ENST00000575942 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
PAM16-213ENST00000575942 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
PAM16-213ENST00000575942 ZNF777Q9ULD5 760 aaPredicted RBP21.78■■□□□ 1.08
PAM16-213ENST00000575942 PREX1Q8TCU6 1659 aa21.78■■□□□ 1.08
PAM16-213ENST00000575942 AGLP35573 1532 aa21.77■■□□□ 1.08
PAM16-213ENST00000575942 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
PAM16-213ENST00000575942 SYCP2Q9BX26 1530 aa21.75■■□□□ 1.07
PAM16-213ENST00000575942 CEBPAP49715 358 aaPredicted RBP21.74■■□□□ 1.07
PAM16-213ENST00000575942 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
PAM16-213ENST00000575942 PLEKHH2Q8IVE3 1493 aa21.73■■□□□ 1.07
PAM16-213ENST00000575942 SETD1BQ9UPS6 1966 aaKnown RBP21.73■■□□□ 1.07
PAM16-213ENST00000575942 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
PAM16-213ENST00000575942 ESF1Q9H501 851 aaKnown RBP21.72■■□□□ 1.07
PAM16-213ENST00000575942 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
PAM16-213ENST00000575942 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
PAM16-213ENST00000575942 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
PAM16-213ENST00000575942 EHBP1L1Q8N3D4 1523 aa21.7■■□□□ 1.07
PAM16-213ENST00000575942 HNRNPMP52272 730 aaKnown RBP eCLIP21.7■■□□□ 1.062e-9■□□□□ 11.1
PAM16-213ENST00000575942 SPAG9O60271 1321 aaKnown RBP21.7■■□□□ 1.06
PAM16-213ENST00000575942 C3P01024 1663 aa21.69■■□□□ 1.06
PAM16-213ENST00000575942 UHRF1BP1Q6BDS2 1440 aa21.68■■□□□ 1.06
PAM16-213ENST00000575942 ATP7AQ04656 1500 aa21.67■■□□□ 1.06
PAM16-213ENST00000575942 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
PAM16-213ENST00000575942 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
PAM16-213ENST00000575942 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
PAM16-213ENST00000575942 SUPT6HQ7KZ85 1726 aaKnown RBP21.65■■□□□ 1.06
PAM16-213ENST00000575942 MROH2AA6NES4 1674 aa21.61■■□□□ 1.05
PAM16-213ENST00000575942 PLXNC1O60486 1568 aa21.6■■□□□ 1.05
PAM16-213ENST00000575942 A2MP01023 1474 aa21.59■■□□□ 1.05
PAM16-213ENST00000575942 ADGBQ8N7X0 1667 aa21.59■■□□□ 1.05
PAM16-213ENST00000575942 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
PAM16-213ENST00000575942 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
PAM16-213ENST00000575942 ZNF644Q9H582 1327 aaPredicted RBP21.56■■□□□ 1.04
PAM16-213ENST00000575942 MBD5Q9P267 1494 aa21.55■■□□□ 1.04
PAM16-213ENST00000575942 CLTCQ00610 1675 aaKnown RBP21.54■■□□□ 1.04
PAM16-213ENST00000575942 NCOA2Q15596 1464 aa21.54■■□□□ 1.04
PAM16-213ENST00000575942 NPATQ14207 1427 aa21.54■■□□□ 1.04
PAM16-213ENST00000575942 RTEL1-TNFRSF6BF6WH68 1400 aa21.53■■□□□ 1.04
PAM16-213ENST00000575942 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
PAM16-213ENST00000575942 CERKQ8TCT0 537 aa21.52■■□□□ 1.04
PAM16-213ENST00000575942 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
PAM16-213ENST00000575942 GGT6Q6P531 493 aa21.5■■□□□ 1.03
PAM16-213ENST00000575942 CAMSAP2Q08AD1 1489 aa21.49■■□□□ 1.03
PAM16-213ENST00000575942 CCDC141Q6ZP82 1450 aa21.49■■□□□ 1.03
PAM16-213ENST00000575942 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
PAM16-213ENST00000575942 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
PAM16-213ENST00000575942 PTPRTO14522 1441 aa21.47■■□□□ 1.03
PAM16-213ENST00000575942 RSPH4AQ5TD94 716 aa21.47■■□□□ 1.03
PAM16-213ENST00000575942 DHX29Q7Z478 1369 aaKnown RBP21.46■■□□□ 1.03
PAM16-213ENST00000575942 LRRC9Q6ZRR7 1453 aa21.45■■□□□ 1.02
PAM16-213ENST00000575942 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
PAM16-213ENST00000575942 ARHGEF5Q12774 1597 aa21.43■■□□□ 1.02
PAM16-213ENST00000575942 CAMSAP1Q5T5Y3 1602 aa21.43■■□□□ 1.02
PAM16-213ENST00000575942 MYO3AQ8NEV4 1616 aa21.43■■□□□ 1.02
PAM16-213ENST00000575942 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
PAM16-213ENST00000575942 PTPRKQ15262 1439 aa21.42■■□□□ 1.02
PAM16-213ENST00000575942 MAP3K1Q13233 1512 aa21.4■■□□□ 1.02
PAM16-213ENST00000575942 TSPY4P0CV99 314 aa21.39■■□□□ 1.01
PAM16-213ENST00000575942 TSPY10P0CW01 314 aa21.39■■□□□ 1.01
PAM16-213ENST00000575942 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
PAM16-213ENST00000575942 KIF3BO15066 747 aa21.38■■□□□ 1.01
PAM16-213ENST00000575942 FAM135AQ9P2D6 1515 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms