RNA–Protein interactions for RNA: ENST00000575636.5

PAM16-210, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-210ENST00000575636 RAPGEF3O95398 923 aa28.21■■■□□ 2.11
PAM16-210ENST00000575636 EFCAB2Q5VUJ9 269 aa28.21■■■□□ 2.11
PAM16-210ENST00000575636 DENND4BO75064 1496 aaPredicted RBP28.19■■■□□ 2.1
PAM16-210ENST00000575636 ADGRL1O94910 1474 aa28.18■■■□□ 2.1
PAM16-210ENST00000575636 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
PAM16-210ENST00000575636 GPATCH8Q9UKJ3 1502 aaKnown RBP28.14■■■□□ 2.1
PAM16-210ENST00000575636 SCAPERQ9BY12 1400 aa28.14■■■□□ 2.1
PAM16-210ENST00000575636 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
PAM16-210ENST00000575636 LRRC9Q6ZRR7 1453 aa28.1■■■□□ 2.09
PAM16-210ENST00000575636 CCNB3Q8WWL7 1395 aa28.09■■■□□ 2.09
PAM16-210ENST00000575636 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
PAM16-210ENST00000575636 ZMYM4Q5VZL5 1548 aa28.08■■■□□ 2.08
PAM16-210ENST00000575636 NCOA2Q15596 1464 aa28.06■■■□□ 2.08
PAM16-210ENST00000575636 ABCC1P33527 1531 aa28.06■■■□□ 2.08
PAM16-210ENST00000575636 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
PAM16-210ENST00000575636 SAMD9LQ8IVG5 1584 aa28.04■■■□□ 2.08
PAM16-210ENST00000575636 KANK4Q5T7N3 995 aaPredicted RBP28.04■■■□□ 2.08
PAM16-210ENST00000575636 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
PAM16-210ENST00000575636 CFDP1Q9UEE9 299 aaPredicted RBP28.01■■■□□ 2.07
PAM16-210ENST00000575636 ARHGEF40Q8TER5 1519 aa28.01■■■□□ 2.07
PAM16-210ENST00000575636 ZNF518AQ6AHZ1 1483 aa28.01■■■□□ 2.07
PAM16-210ENST00000575636 KDM5CP41229 1560 aa27.99■■■□□ 2.07
PAM16-210ENST00000575636 APLP2Q06481 763 aa27.99■■■□□ 2.07
PAM16-210ENST00000575636 ZNF777Q9ULD5 760 aaPredicted RBP27.99■■■□□ 2.07
PAM16-210ENST00000575636 MAGI2Q86UL8 1455 aa27.99■■■□□ 2.07
PAM16-210ENST00000575636 ZFYVE16Q7Z3T8 1539 aa27.97■■■□□ 2.07
PAM16-210ENST00000575636 TRAPPC8Q9Y2L5 1435 aa27.96■■■□□ 2.07
PAM16-210ENST00000575636 KDM4FA0A1W2PPD8 638 aa27.96■■■□□ 2.07
PAM16-210ENST00000575636 AFAP1Q8N556 730 aa27.96■■■□□ 2.07
PAM16-210ENST00000575636 SYCP2Q9BX26 1530 aa27.95■■■□□ 2.06
PAM16-210ENST00000575636 YEATS2Q9ULM3 1422 aa27.94■■■□□ 2.06
PAM16-210ENST00000575636 PLEKHH2Q8IVE3 1493 aa27.93■■■□□ 2.06
PAM16-210ENST00000575636 KIAA1107Q9UPP5 1409 aa27.92■■■□□ 2.06
PAM16-210ENST00000575636 HECW2Q9P2P5 1572 aa27.91■■■□□ 2.06
PAM16-210ENST00000575636 HNRNPMP52272 730 aaKnown RBP eCLIP27.89■■■□□ 2.063e-7■■■■■ 27.4
PAM16-210ENST00000575636 ZNF644Q9H582 1327 aaPredicted RBP27.89■■■□□ 2.05
PAM16-210ENST00000575636 MLH3Q9UHC1 1453 aa27.88■■■□□ 2.05
PAM16-210ENST00000575636 SIGLEC1Q9BZZ2 1709 aa27.87■■■□□ 2.05
PAM16-210ENST00000575636 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
PAM16-210ENST00000575636 KIDINS220Q9ULH0 1771 aa27.85■■■□□ 2.05
PAM16-210ENST00000575636 ATP10AO60312 1499 aa27.84■■■□□ 2.05
PAM16-210ENST00000575636 CAMSAP2Q08AD1 1489 aa27.83■■■□□ 2.04
PAM16-210ENST00000575636 MBD5Q9P267 1494 aa27.83■■■□□ 2.04
PAM16-210ENST00000575636 DIP2CQ9Y2E4 1556 aa27.82■■■□□ 2.04
PAM16-210ENST00000575636 ABCA6Q8N139 1617 aa27.82■■■□□ 2.04
PAM16-210ENST00000575636 MYOM3Q5VTT5 1437 aa27.82■■■□□ 2.04
PAM16-210ENST00000575636 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
PAM16-210ENST00000575636 MYT1LQ9UL68 1186 aa27.8■■■□□ 2.04
PAM16-210ENST00000575636 C9orf84Q5VXU9 1444 aa27.79■■■□□ 2.04
PAM16-210ENST00000575636 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
PAM16-210ENST00000575636 ADAMTSL3P82987 1691 aa27.78■■■□□ 2.04
PAM16-210ENST00000575636 MIA2Q96PC5 1412 aa27.77■■■□□ 2.04
PAM16-210ENST00000575636 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
PAM16-210ENST00000575636 SPAG9O60271 1321 aaKnown RBP27.76■■■□□ 2.03
PAM16-210ENST00000575636 REREQ9P2R6 1566 aa27.75■■■□□ 2.03
PAM16-210ENST00000575636 ATP7AQ04656 1500 aa27.75■■■□□ 2.03
PAM16-210ENST00000575636 ARHGEF5Q12774 1597 aa27.73■■■□□ 2.03
PAM16-210ENST00000575636 CCDC141Q6ZP82 1450 aa27.71■■■□□ 2.03
PAM16-210ENST00000575636 RSPH4AQ5TD94 716 aa27.69■■■□□ 2.02
PAM16-210ENST00000575636 MADDQ8WXG6 1647 aa27.68■■■□□ 2.02
PAM16-210ENST00000575636 PTPN23Q9H3S7 1636 aa27.68■■■□□ 2.02
PAM16-210ENST00000575636 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
PAM16-210ENST00000575636 FGD6Q6ZV73 1430 aa27.66■■■□□ 2.02
PAM16-210ENST00000575636 AGLP35573 1532 aa27.65■■■□□ 2.02
PAM16-210ENST00000575636 ADGBQ8N7X0 1667 aa27.64■■■□□ 2.02
PAM16-210ENST00000575636 MLECQ14165 292 aa27.62■■■□□ 2.01
PAM16-210ENST00000575636 FER1L4A9Z1Z3 1794 aa27.61■■■□□ 2.01
PAM16-210ENST00000575636 TCOF1Q13428 1488 aaKnown RBP27.61■■■□□ 2.01
PAM16-210ENST00000575636 RIMS1Q86UR5 1692 aaKnown RBP27.61■■■□□ 2.01
PAM16-210ENST00000575636 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
PAM16-210ENST00000575636 A2MP01023 1474 aa27.59■■■□□ 2.01
PAM16-210ENST00000575636 MAST1Q9Y2H9 1570 aa27.59■■■□□ 2.01
PAM16-210ENST00000575636 PTPRMP28827 1452 aa27.58■■■□□ 2.01
PAM16-210ENST00000575636 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
PAM16-210ENST00000575636 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
PAM16-210ENST00000575636 CROCC2H7BZ55 1655 aa27.56■■■□□ 2
PAM16-210ENST00000575636 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
PAM16-210ENST00000575636 DNMT1P26358 1616 aaKnown RBP27.54■■■□□ 2
PAM16-210ENST00000575636 ABCC5O15440 1437 aa27.51■■□□□ 1.99
PAM16-210ENST00000575636 DHX29Q7Z478 1369 aaKnown RBP27.5■■□□□ 1.99
PAM16-210ENST00000575636 SHANK2Q9UPX8 1470 aa27.49■■□□□ 1.99
PAM16-210ENST00000575636 DAPK1P53355 1430 aa27.49■■□□□ 1.99
PAM16-210ENST00000575636 FAM50AQ14320 339 aaKnown RBP27.44■■□□□ 1.98
PAM16-210ENST00000575636 GGT6Q6P531 493 aa27.38■■□□□ 1.97
PAM16-210ENST00000575636 C3P01024 1663 aa27.37■■□□□ 1.97
PAM16-210ENST00000575636 ESF1Q9H501 851 aaKnown RBP27.37■■□□□ 1.97
PAM16-210ENST00000575636 CNTLNQ9NXG0 1405 aa27.37■■□□□ 1.97
PAM16-210ENST00000575636 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
PAM16-210ENST00000575636 CLTCQ00610 1675 aaKnown RBP27.36■■□□□ 1.97
PAM16-210ENST00000575636 DUOX2Q9NRD8 1548 aa27.36■■□□□ 1.97
PAM16-210ENST00000575636 KIF3BO15066 747 aa27.36■■□□□ 1.97
PAM16-210ENST00000575636 PLPPR3Q6T4P5 718 aa27.36■■□□□ 1.97
PAM16-210ENST00000575636 EIF2AK4Q9P2K8 1649 aaKnown RBP27.35■■□□□ 1.97
PAM16-210ENST00000575636 CEBPAP49715 358 aaPredicted RBP27.34■■□□□ 1.97
PAM16-210ENST00000575636 CHIC2Q9UKJ5 165 aa27.34■■□□□ 1.97
PAM16-210ENST00000575636 KIF15Q9NS87 1388 aa27.34■■□□□ 1.97
PAM16-210ENST00000575636 PPP6R1Q9UPN7 881 aa27.33■■□□□ 1.97
PAM16-210ENST00000575636 RRP7BPQ9NSQ0 103 aa27.32■■□□□ 1.96
PAM16-210ENST00000575636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.32■■□□□ 1.961e-7■■■□□ 14.6
PAM16-210ENST00000575636 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms