RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
POLR2A-204ENST00000575547 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
POLR2A-204ENST00000575547 RICTORQ6R327 1708 aa10.61□□□□□ -0.71
POLR2A-204ENST00000575547 ZFYVE16Q7Z3T8 1539 aa10.61□□□□□ -0.71
POLR2A-204ENST00000575547 ARHGEF40Q8TER5 1519 aa10.6□□□□□ -0.71
POLR2A-204ENST00000575547 MADDQ8WXG6 1647 aa10.6□□□□□ -0.71
POLR2A-204ENST00000575547 ATP10AO60312 1499 aa10.6□□□□□ -0.71
POLR2A-204ENST00000575547 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
POLR2A-204ENST00000575547 HSPA2P54652 639 aa10.59□□□□□ -0.71
POLR2A-204ENST00000575547 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
POLR2A-204ENST00000575547 ESF1Q9H501 851 aaKnown RBP10.58□□□□□ -0.72
POLR2A-204ENST00000575547 MYO5CQ9NQX4 1742 aa10.58□□□□□ -0.72
POLR2A-204ENST00000575547 KIF14Q15058 1648 aa10.58□□□□□ -0.72
POLR2A-204ENST00000575547 ZMYM4Q5VZL5 1548 aa10.58□□□□□ -0.72
POLR2A-204ENST00000575547 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
POLR2A-204ENST00000575547 RIMS1Q86UR5 1692 aaKnown RBP10.57□□□□□ -0.72
POLR2A-204ENST00000575547 CEBPAP49715 358 aaPredicted RBP10.57□□□□□ -0.72
POLR2A-204ENST00000575547 C9orf84Q5VXU9 1444 aa10.57□□□□□ -0.72
POLR2A-204ENST00000575547 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
POLR2A-204ENST00000575547 ZNF518AQ6AHZ1 1483 aa10.55□□□□□ -0.72
POLR2A-204ENST00000575547 FBXO41Q8TF61 875 aa10.55□□□□□ -0.72
POLR2A-204ENST00000575547 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
POLR2A-204ENST00000575547 HNRNPMP52272 730 aaKnown RBP eCLIP10.53□□□□□ -0.72
POLR2A-204ENST00000575547 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
POLR2A-204ENST00000575547 LMTK3Q96Q04 1460 aa10.53□□□□□ -0.72
POLR2A-204ENST00000575547 TRAPPC8Q9Y2L5 1435 aa10.51□□□□□ -0.73
POLR2A-204ENST00000575547 LRRIQ1Q96JM4 1722 aa10.51□□□□□ -0.73
POLR2A-204ENST00000575547 SPAG9O60271 1321 aaKnown RBP10.51□□□□□ -0.73
POLR2A-204ENST00000575547 SIGLEC1Q9BZZ2 1709 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 CDC42BPBQ9Y5S2 1711 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 FYCO1Q9BQS8 1478 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 FER1L4A9Z1Z3 1794 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 CCNB3Q8WWL7 1395 aa10.5□□□□□ -0.73
POLR2A-204ENST00000575547 MLH3Q9UHC1 1453 aa10.49□□□□□ -0.73
POLR2A-204ENST00000575547 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
POLR2A-204ENST00000575547 KDM5CP41229 1560 aa10.48□□□□□ -0.73
POLR2A-204ENST00000575547 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
POLR2A-204ENST00000575547 GPATCH8Q9UKJ3 1502 aaKnown RBP10.47□□□□□ -0.73
POLR2A-204ENST00000575547 SETD1BQ9UPS6 1966 aaKnown RBP10.46□□□□□ -0.73
POLR2A-204ENST00000575547 ABCC1P33527 1531 aa10.46□□□□□ -0.74
POLR2A-204ENST00000575547 DIP2CQ9Y2E4 1556 aa10.46□□□□□ -0.74
POLR2A-204ENST00000575547 PREX2Q70Z35 1606 aa10.46□□□□□ -0.74
POLR2A-204ENST00000575547 UHRF1BP1Q6BDS2 1440 aa10.45□□□□□ -0.74
POLR2A-204ENST00000575547 GGT6Q6P531 493 aa10.45□□□□□ -0.74
POLR2A-204ENST00000575547 CDC42BPAQ5VT25 1732 aa10.44□□□□□ -0.74
POLR2A-204ENST00000575547 ZNF644Q9H582 1327 aaPredicted RBP10.44□□□□□ -0.74
POLR2A-204ENST00000575547 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
POLR2A-204ENST00000575547 ABCA6Q8N139 1617 aa10.44□□□□□ -0.74
POLR2A-204ENST00000575547 PLEKHH2Q8IVE3 1493 aa10.43□□□□□ -0.74
POLR2A-204ENST00000575547 KIAA1107Q9UPP5 1409 aa10.43□□□□□ -0.74
POLR2A-204ENST00000575547 LOC105371045A0A1W2PR82 267 aa10.43□□□□□ -0.74
POLR2A-204ENST00000575547 REREQ9P2R6 1566 aa10.43□□□□□ -0.74
POLR2A-204ENST00000575547 AGLP35573 1532 aa10.43□□□□□ -0.74
POLR2A-204ENST00000575547 CNTLNQ9NXG0 1405 aa10.42□□□□□ -0.74
POLR2A-204ENST00000575547 SAMD9LQ8IVG5 1584 aa10.42□□□□□ -0.74
POLR2A-204ENST00000575547 SYCP2Q9BX26 1530 aa10.42□□□□□ -0.74
POLR2A-204ENST00000575547 KIDINS220Q9ULH0 1771 aa10.42□□□□□ -0.74
POLR2A-204ENST00000575547 CEP162Q5TB80 1403 aa10.41□□□□□ -0.74
POLR2A-204ENST00000575547 ZMYM3Q14202 1370 aa10.41□□□□□ -0.74
POLR2A-204ENST00000575547 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
POLR2A-204ENST00000575547 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.74
POLR2A-204ENST00000575547 PPP6R1Q9UPN7 881 aa10.4□□□□□ -0.74
POLR2A-204ENST00000575547 A2MP01023 1474 aa10.39□□□□□ -0.75
POLR2A-204ENST00000575547 TSPY4P0CV99 314 aa10.39□□□□□ -0.75
POLR2A-204ENST00000575547 TSPY10P0CW01 314 aa10.39□□□□□ -0.75
POLR2A-204ENST00000575547 KIF3BO15066 747 aa10.38□□□□□ -0.75
POLR2A-204ENST00000575547 SUPT6HQ7KZ85 1726 aaKnown RBP10.38□□□□□ -0.75
POLR2A-204ENST00000575547 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
POLR2A-204ENST00000575547 C3P01024 1663 aa10.38□□□□□ -0.75
POLR2A-204ENST00000575547 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
POLR2A-204ENST00000575547 EHBP1L1Q8N3D4 1523 aa10.36□□□□□ -0.75
POLR2A-204ENST00000575547 DHX29Q7Z478 1369 aaKnown RBP10.36□□□□□ -0.75
POLR2A-204ENST00000575547 PTPRTO14522 1441 aa10.35□□□□□ -0.75
POLR2A-204ENST00000575547 NPATQ14207 1427 aa10.35□□□□□ -0.75
POLR2A-204ENST00000575547 APLP2Q06481 763 aa10.35□□□□□ -0.75
POLR2A-204ENST00000575547 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
POLR2A-204ENST00000575547 STRCQ7RTU9 1775 aa10.34□□□□□ -0.75
POLR2A-204ENST00000575547 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
POLR2A-204ENST00000575547 NCOA2Q15596 1464 aa10.34□□□□□ -0.75
POLR2A-204ENST00000575547 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
POLR2A-204ENST00000575547 PKD2Q13563 968 aa10.33□□□□□ -0.76
POLR2A-204ENST00000575547 TIAM1Q13009 1591 aa10.33□□□□□ -0.76
POLR2A-204ENST00000575547 KANK4Q5T7N3 995 aaPredicted RBP10.32□□□□□ -0.76
POLR2A-204ENST00000575547 NCOA1Q15788 1441 aa10.32□□□□□ -0.76
POLR2A-204ENST00000575547 CLTCQ00610 1675 aaKnown RBP10.31□□□□□ -0.76
POLR2A-204ENST00000575547 INO80Q9ULG1 1556 aaPredicted RBP10.31□□□□□ -0.76
POLR2A-204ENST00000575547 FBXO31Q5XUX0 539 aaPredicted RBP10.31□□□□□ -0.76
POLR2A-204ENST00000575547 PTPRKQ15262 1439 aa10.31□□□□□ -0.76
POLR2A-204ENST00000575547 MROH2AA6NES4 1674 aa10.31□□□□□ -0.76
POLR2A-204ENST00000575547 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
POLR2A-204ENST00000575547 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
POLR2A-204ENST00000575547 ADGBQ8N7X0 1667 aa10.3□□□□□ -0.76
POLR2A-204ENST00000575547 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
POLR2A-204ENST00000575547 CAMSAP2Q08AD1 1489 aa10.3□□□□□ -0.76
POLR2A-204ENST00000575547 PLXNC1O60486 1568 aa10.29□□□□□ -0.76
POLR2A-204ENST00000575547 THEMISQ8N1K5 641 aaPredicted RBP10.28□□□□□ -0.76
POLR2A-204ENST00000575547 LRRC9Q6ZRR7 1453 aa10.28□□□□□ -0.76
POLR2A-204ENST00000575547 ZNF335Q9H4Z2 1342 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms