RNA–Protein interactions for RNA: ENST00000575379.1

CHRNB1-207, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-207ENST00000575379 LRRIQ1Q96JM4 1722 aa29.88■■■□□ 2.37
CHRNB1-207ENST00000575379 MYO5CQ9NQX4 1742 aa29.88■■■□□ 2.37
CHRNB1-207ENST00000575379 POGZQ7Z3K3 1410 aa29.85■■■□□ 2.37
CHRNB1-207ENST00000575379 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
CHRNB1-207ENST00000575379 CDK11AQ9UQ88 783 aaPredicted RBP29.84■■■□□ 2.37
CHRNB1-207ENST00000575379 MAGI2Q86UL8 1455 aa29.81■■■□□ 2.36
CHRNB1-207ENST00000575379 MLECQ14165 292 aa29.81■■■□□ 2.36
CHRNB1-207ENST00000575379 TROQ12816 1431 aaPredicted RBP29.8■■■□□ 2.36
CHRNB1-207ENST00000575379 EFCAB2Q5VUJ9 269 aa29.8■■■□□ 2.36
CHRNB1-207ENST00000575379 PCF11O94913 1555 aaKnown RBP29.79■■■□□ 2.36
CHRNB1-207ENST00000575379 LMTK3Q96Q04 1460 aa29.78■■■□□ 2.36
CHRNB1-207ENST00000575379 ARHGAP5Q13017 1502 aa29.76■■■□□ 2.35
CHRNB1-207ENST00000575379 CLIP1P30622 1438 aa29.74■■■□□ 2.35
CHRNB1-207ENST00000575379 FER1L4A9Z1Z3 1794 aa29.71■■■□□ 2.35
CHRNB1-207ENST00000575379 ATP10AO60312 1499 aa29.7■■■□□ 2.35
CHRNB1-207ENST00000575379 CDC42BPBQ9Y5S2 1711 aa29.68■■■□□ 2.34
CHRNB1-207ENST00000575379 AFAP1Q8N556 730 aa29.68■■■□□ 2.34
CHRNB1-207ENST00000575379 CASKIN1Q8WXD9 1431 aa29.68■■■□□ 2.34
CHRNB1-207ENST00000575379 HSPA2P54652 639 aa29.67■■■□□ 2.34
CHRNB1-207ENST00000575379 C9orf84Q5VXU9 1444 aa29.67■■■□□ 2.34
CHRNB1-207ENST00000575379 ZNF518AQ6AHZ1 1483 aa29.66■■■□□ 2.34
CHRNB1-207ENST00000575379 CCDC18Q5T9S5 1454 aa29.63■■■□□ 2.33
CHRNB1-207ENST00000575379 MYT1LQ9UL68 1186 aa29.63■■■□□ 2.33
CHRNB1-207ENST00000575379 KDM5CP41229 1560 aa29.63■■■□□ 2.33
CHRNB1-207ENST00000575379 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
CHRNB1-207ENST00000575379 PREX2Q70Z35 1606 aa29.61■■■□□ 2.33
CHRNB1-207ENST00000575379 DIP2CQ9Y2E4 1556 aa29.56■■■□□ 2.32
CHRNB1-207ENST00000575379 FYCO1Q9BQS8 1478 aa29.55■■■□□ 2.32
CHRNB1-207ENST00000575379 TRAPPC8Q9Y2L5 1435 aa29.55■■■□□ 2.32
CHRNB1-207ENST00000575379 CEBPAP49715 358 aaPredicted RBP29.55■■■□□ 2.32
CHRNB1-207ENST00000575379 ABCC1P33527 1531 aa29.55■■■□□ 2.32
CHRNB1-207ENST00000575379 CDC42BPAQ5VT25 1732 aa29.54■■■□□ 2.32
CHRNB1-207ENST00000575379 ABCA6Q8N139 1617 aa29.54■■■□□ 2.32
CHRNB1-207ENST00000575379 FBXO41Q8TF61 875 aa29.54■■■□□ 2.32
CHRNB1-207ENST00000575379 ITSN2Q9NZM3 1697 aa29.53■■■□□ 2.32
CHRNB1-207ENST00000575379 MLH3Q9UHC1 1453 aa29.49■■■□□ 2.31
CHRNB1-207ENST00000575379 ZNF777Q9ULD5 760 aaPredicted RBP29.46■■■□□ 2.31
CHRNB1-207ENST00000575379 REREQ9P2R6 1566 aa29.46■■■□□ 2.31
CHRNB1-207ENST00000575379 PREX1Q8TCU6 1659 aa29.45■■■□□ 2.31
CHRNB1-207ENST00000575379 KIDINS220Q9ULH0 1771 aa29.43■■■□□ 2.3
CHRNB1-207ENST00000575379 SAMD9LQ8IVG5 1584 aa29.42■■■□□ 2.3
CHRNB1-207ENST00000575379 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
CHRNB1-207ENST00000575379 SYCP2Q9BX26 1530 aa29.38■■■□□ 2.29
CHRNB1-207ENST00000575379 AGLP35573 1532 aa29.36■■■□□ 2.29
CHRNB1-207ENST00000575379 C3P01024 1663 aa29.36■■■□□ 2.29
CHRNB1-207ENST00000575379 HNRNPMP52272 730 aaKnown RBP eCLIP29.35■■■□□ 2.29
CHRNB1-207ENST00000575379 UHRF1BP1Q6BDS2 1440 aa29.31■■■□□ 2.28
CHRNB1-207ENST00000575379 ESF1Q9H501 851 aaKnown RBP29.31■■■□□ 2.28
CHRNB1-207ENST00000575379 SETD1BQ9UPS6 1966 aaKnown RBP29.31■■■□□ 2.28
CHRNB1-207ENST00000575379 CFDP1Q9UEE9 299 aaPredicted RBP29.3■■■□□ 2.28
CHRNB1-207ENST00000575379 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
CHRNB1-207ENST00000575379 MTUS2Q5JR59 1369 aa29.29■■■□□ 2.28
CHRNB1-207ENST00000575379 CCNB3Q8WWL7 1395 aa29.29■■■□□ 2.28
CHRNB1-207ENST00000575379 SPAG9O60271 1321 aaKnown RBP29.29■■■□□ 2.28
CHRNB1-207ENST00000575379 SUPT6HQ7KZ85 1726 aaKnown RBP29.26■■■□□ 2.27
CHRNB1-207ENST00000575379 CERKQ8TCT0 537 aa29.26■■■□□ 2.27
CHRNB1-207ENST00000575379 ATP7AQ04656 1500 aa29.24■■■□□ 2.27
CHRNB1-207ENST00000575379 KIAA1107Q9UPP5 1409 aa29.22■■■□□ 2.27
CHRNB1-207ENST00000575379 INO80Q9ULG1 1556 aaPredicted RBP29.22■■■□□ 2.27
CHRNB1-207ENST00000575379 PLEKHH2Q8IVE3 1493 aa29.21■■■□□ 2.27
CHRNB1-207ENST00000575379 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.27
CHRNB1-207ENST00000575379 CEP162Q5TB80 1403 aa29.2■■■□□ 2.27
CHRNB1-207ENST00000575379 TIAM1Q13009 1591 aa29.2■■■□□ 2.26
CHRNB1-207ENST00000575379 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.26
CHRNB1-207ENST00000575379 EHBP1L1Q8N3D4 1523 aa29.17■■■□□ 2.26
CHRNB1-207ENST00000575379 PLXNC1O60486 1568 aa29.15■■■□□ 2.26
CHRNB1-207ENST00000575379 DMRT2Q9Y5R5 561 aa29.15■■■□□ 2.26
CHRNB1-207ENST00000575379 A2MP01023 1474 aa29.15■■■□□ 2.26
CHRNB1-207ENST00000575379 MROH2AA6NES4 1674 aa29.14■■■□□ 2.26
CHRNB1-207ENST00000575379 CLTCQ00610 1675 aaKnown RBP29.13■■■□□ 2.25
CHRNB1-207ENST00000575379 ZMYM3Q14202 1370 aa29.13■■■□□ 2.25
CHRNB1-207ENST00000575379 GGT6Q6P531 493 aa29.09■■■□□ 2.25
CHRNB1-207ENST00000575379 MBD5Q9P267 1494 aa29.09■■■□□ 2.25
CHRNB1-207ENST00000575379 ADGBQ8N7X0 1667 aa29.07■■■□□ 2.24
CHRNB1-207ENST00000575379 NPATQ14207 1427 aa29.06■■■□□ 2.24
CHRNB1-207ENST00000575379 PTPRTO14522 1441 aa29.04■■■□□ 2.24
CHRNB1-207ENST00000575379 NCOA1Q15788 1441 aa29.04■■■□□ 2.24
CHRNB1-207ENST00000575379 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
CHRNB1-207ENST00000575379 NCOA2Q15596 1464 aa29.02■■■□□ 2.24
CHRNB1-207ENST00000575379 MYO3AQ8NEV4 1616 aa28.98■■■□□ 2.23
CHRNB1-207ENST00000575379 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
CHRNB1-207ENST00000575379 LOC105371045A0A1W2PR82 267 aa28.98■■■□□ 2.23
CHRNB1-207ENST00000575379 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
CHRNB1-207ENST00000575379 RTEL1-TNFRSF6BF6WH68 1400 aa28.96■■■□□ 2.23
CHRNB1-207ENST00000575379 NCKAP5LQ9HCH0 1330 aa28.95■■■□□ 2.23
CHRNB1-207ENST00000575379 CCDC141Q6ZP82 1450 aa28.94■■■□□ 2.22
CHRNB1-207ENST00000575379 LTBP4Q8N2S1 1624 aa28.94■■■□□ 2.22
CHRNB1-207ENST00000575379 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
CHRNB1-207ENST00000575379 ZNF142P52746 1687 aaPredicted RBP28.93■■■□□ 2.22
CHRNB1-207ENST00000575379 CEP170BQ9Y4F5 1589 aaPredicted RBP28.92■■■□□ 2.22
CHRNB1-207ENST00000575379 KIF3BO15066 747 aa28.89■■■□□ 2.22
CHRNB1-207ENST00000575379 PPP6R1Q9UPN7 881 aa28.89■■■□□ 2.22
CHRNB1-207ENST00000575379 VPS8Q8N3P4 1428 aa28.87■■■□□ 2.21
CHRNB1-207ENST00000575379 LRRC9Q6ZRR7 1453 aa28.85■■■□□ 2.21
CHRNB1-207ENST00000575379 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
CHRNB1-207ENST00000575379 PLA2R1Q13018 1463 aa28.83■■■□□ 2.21
CHRNB1-207ENST00000575379 RSPH4AQ5TD94 716 aa28.82■■■□□ 2.2
CHRNB1-207ENST00000575379 ZNF335Q9H4Z2 1342 aaPredicted RBP28.82■■■□□ 2.2
CHRNB1-207ENST00000575379 ARHGEF5Q12774 1597 aa28.82■■■□□ 2.2
CHRNB1-207ENST00000575379 TCOF1Q13428 1488 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms