RNA–Protein interactions for RNA: ENST00000574139.5

ABR-225, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-225ENST00000574139 CDC42BPBQ9Y5S2 1711 aa28.74■■■□□ 2.19
ABR-225ENST00000574139 ARHGEF40Q8TER5 1519 aa28.72■■■□□ 2.19
ABR-225ENST00000574139 POGZQ7Z3K3 1410 aa28.7■■■□□ 2.19
ABR-225ENST00000574139 ZMYM4Q5VZL5 1548 aa28.7■■■□□ 2.19
ABR-225ENST00000574139 PREX2Q70Z35 1606 aa28.7■■■□□ 2.19
ABR-225ENST00000574139 CDC42BPAQ5VT25 1732 aa28.68■■■□□ 2.18
ABR-225ENST00000574139 ZFYVE16Q7Z3T8 1539 aa28.65■■■□□ 2.18
ABR-225ENST00000574139 YEATS2Q9ULM3 1422 aa28.65■■■□□ 2.18
ABR-225ENST00000574139 ARID4BQ4LE39 1312 aaPredicted RBP28.63■■■□□ 2.17
ABR-225ENST00000574139 MTUS2Q5JR59 1369 aa28.62■■■□□ 2.17
ABR-225ENST00000574139 MAGI2Q86UL8 1455 aa28.6■■■□□ 2.17
ABR-225ENST00000574139 BCORL1Q5H9F3 1711 aa28.59■■■□□ 2.17
ABR-225ENST00000574139 ADAMTSL3P82987 1691 aa28.58■■■□□ 2.17
ABR-225ENST00000574139 AFAP1Q8N556 730 aa28.58■■■□□ 2.17
ABR-225ENST00000574139 ZNF518AQ6AHZ1 1483 aa28.58■■■□□ 2.17
ABR-225ENST00000574139 ABCC1P33527 1531 aa28.58■■■□□ 2.17
ABR-225ENST00000574139 SIGLEC1Q9BZZ2 1709 aa28.57■■■□□ 2.16
ABR-225ENST00000574139 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
ABR-225ENST00000574139 ARHGEF12Q9NZN5 1544 aa28.56■■■□□ 2.16
ABR-225ENST00000574139 ITSN2Q9NZM3 1697 aa28.55■■■□□ 2.16
ABR-225ENST00000574139 EHBP1L1Q8N3D4 1523 aa28.55■■■□□ 2.16
ABR-225ENST00000574139 KDM5CP41229 1560 aa28.54■■■□□ 2.16
ABR-225ENST00000574139 VPS8Q8N3P4 1428 aa28.54■■■□□ 2.16
ABR-225ENST00000574139 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
ABR-225ENST00000574139 TRAPPC8Q9Y2L5 1435 aa28.52■■■□□ 2.16
ABR-225ENST00000574139 CCNB3Q8WWL7 1395 aa28.52■■■□□ 2.16
ABR-225ENST00000574139 SAMD9LQ8IVG5 1584 aa28.52■■■□□ 2.16
ABR-225ENST00000574139 MADDQ8WXG6 1647 aa28.51■■■□□ 2.15
ABR-225ENST00000574139 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
ABR-225ENST00000574139 HECW2Q9P2P5 1572 aa28.49■■■□□ 2.15
ABR-225ENST00000574139 ATP10AO60312 1499 aa28.48■■■□□ 2.15
ABR-225ENST00000574139 TIAM1Q13009 1591 aa28.48■■■□□ 2.15
ABR-225ENST00000574139 C9orf84Q5VXU9 1444 aa28.46■■■□□ 2.15
ABR-225ENST00000574139 CFDP1Q9UEE9 299 aaPredicted RBP28.46■■■□□ 2.15
ABR-225ENST00000574139 SYCP2Q9BX26 1530 aa28.46■■■□□ 2.15
ABR-225ENST00000574139 PTPRMP28827 1452 aa28.46■■■□□ 2.15
ABR-225ENST00000574139 RIMS1Q86UR5 1692 aaKnown RBP28.43■■■□□ 2.14
ABR-225ENST00000574139 DIP2CQ9Y2E4 1556 aa28.43■■■□□ 2.14
ABR-225ENST00000574139 MLECQ14165 292 aa28.43■■■□□ 2.14
ABR-225ENST00000574139 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
ABR-225ENST00000574139 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
ABR-225ENST00000574139 SUPT6HQ7KZ85 1726 aaKnown RBP28.41■■■□□ 2.14
ABR-225ENST00000574139 HNRNPMP52272 730 aaKnown RBP eCLIP28.41■■■□□ 2.14
ABR-225ENST00000574139 KIDINS220Q9ULH0 1771 aa28.39■■■□□ 2.13
ABR-225ENST00000574139 NCOA2Q15596 1464 aa28.39■■■□□ 2.13
ABR-225ENST00000574139 PLEKHH2Q8IVE3 1493 aa28.36■■■□□ 2.13
ABR-225ENST00000574139 ZNF644Q9H582 1327 aaPredicted RBP28.36■■■□□ 2.13
ABR-225ENST00000574139 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
ABR-225ENST00000574139 LRRC9Q6ZRR7 1453 aa28.35■■■□□ 2.13
ABR-225ENST00000574139 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
ABR-225ENST00000574139 REREQ9P2R6 1566 aa28.32■■■□□ 2.12
ABR-225ENST00000574139 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
ABR-225ENST00000574139 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
ABR-225ENST00000574139 SPAG9O60271 1321 aaKnown RBP28.31■■■□□ 2.12
ABR-225ENST00000574139 MAP3K1Q13233 1512 aa28.3■■■□□ 2.12
ABR-225ENST00000574139 ATP7AQ04656 1500 aa28.27■■■□□ 2.12
ABR-225ENST00000574139 INO80Q9ULG1 1556 aaPredicted RBP28.26■■■□□ 2.11
ABR-225ENST00000574139 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
ABR-225ENST00000574139 AGLP35573 1532 aa28.23■■■□□ 2.11
ABR-225ENST00000574139 CAMSAP2Q08AD1 1489 aa28.23■■■□□ 2.11
ABR-225ENST00000574139 APLP2Q06481 763 aa28.18■■■□□ 2.1
ABR-225ENST00000574139 CCDC141Q6ZP82 1450 aa28.15■■■□□ 2.1
ABR-225ENST00000574139 CEBPAP49715 358 aaPredicted RBP28.14■■■□□ 2.1
ABR-225ENST00000574139 A2MP01023 1474 aa28.14■■■□□ 2.09
ABR-225ENST00000574139 LMTK3Q96Q04 1460 aa28.13■■■□□ 2.09
ABR-225ENST00000574139 PLXNC1O60486 1568 aa28.12■■■□□ 2.09
ABR-225ENST00000574139 ADGBQ8N7X0 1667 aa28.12■■■□□ 2.09
ABR-225ENST00000574139 MYOM3Q5VTT5 1437 aa28.11■■■□□ 2.09
ABR-225ENST00000574139 RTEL1-TNFRSF6BF6WH68 1400 aa28.09■■■□□ 2.09
ABR-225ENST00000574139 ARHGEF5Q12774 1597 aa28.09■■■□□ 2.09
ABR-225ENST00000574139 RSPH4AQ5TD94 716 aa28.07■■■□□ 2.08
ABR-225ENST00000574139 ESF1Q9H501 851 aaKnown RBP28.07■■■□□ 2.08
ABR-225ENST00000574139 C3P01024 1663 aa28.06■■■□□ 2.08
ABR-225ENST00000574139 MIA2Q96PC5 1412 aa28.05■■■□□ 2.08
ABR-225ENST00000574139 HSPA2P54652 639 aa28.02■■■□□ 2.08
ABR-225ENST00000574139 DHX29Q7Z478 1369 aaKnown RBP28■■■□□ 2.07
ABR-225ENST00000574139 TSPY4P0CV99 314 aa28■■■□□ 2.07
ABR-225ENST00000574139 TSPY10P0CW01 314 aa28■■■□□ 2.07
ABR-225ENST00000574139 GGT6Q6P531 493 aa28■■■□□ 2.07
ABR-225ENST00000574139 PREX1Q8TCU6 1659 aa28■■■□□ 2.07
ABR-225ENST00000574139 CNTLNQ9NXG0 1405 aa28■■■□□ 2.07
ABR-225ENST00000574139 CLTCQ00610 1675 aaKnown RBP27.97■■■□□ 2.07
ABR-225ENST00000574139 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
ABR-225ENST00000574139 PTPN23Q9H3S7 1636 aa27.96■■■□□ 2.07
ABR-225ENST00000574139 SETD1BQ9UPS6 1966 aaKnown RBP27.96■■■□□ 2.07
ABR-225ENST00000574139 MAST1Q9Y2H9 1570 aa27.94■■■□□ 2.06
ABR-225ENST00000574139 ZMYM3Q14202 1370 aa27.92■■■□□ 2.06
ABR-225ENST00000574139 FGD6Q6ZV73 1430 aa27.92■■■□□ 2.06
ABR-225ENST00000574139 KIF3BO15066 747 aa27.91■■■□□ 2.06
ABR-225ENST00000574139 UHRF1BP1Q6BDS2 1440 aa27.9■■■□□ 2.06
ABR-225ENST00000574139 CROCC2H7BZ55 1655 aa27.87■■■□□ 2.05
ABR-225ENST00000574139 TCOF1Q13428 1488 aaKnown RBP27.86■■■□□ 2.05
ABR-225ENST00000574139 ABCC5O15440 1437 aa27.85■■■□□ 2.05
ABR-225ENST00000574139 PPP6R1Q9UPN7 881 aa27.85■■■□□ 2.05
ABR-225ENST00000574139 DNMT1P26358 1616 aaKnown RBP27.83■■■□□ 2.05
ABR-225ENST00000574139 DAPK1P53355 1430 aa27.82■■■□□ 2.04
ABR-225ENST00000574139 NPATQ14207 1427 aa27.82■■■□□ 2.04
ABR-225ENST00000574139 SHANK2Q9UPX8 1470 aa27.81■■■□□ 2.04
ABR-225ENST00000574139 PTPRKQ15262 1439 aa27.79■■■□□ 2.04
ABR-225ENST00000574139 KDM5DQ9BY66 1539 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms