RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 RAPGEF3O95398 923 aa33.37■■■□□ 2.93
ABR-221ENST00000573559 FRMPD1Q5SYB0 1578 aa33.37■■■□□ 2.93
ABR-221ENST00000573559 DENND4BO75064 1496 aaPredicted RBP33.37■■■□□ 2.93
ABR-221ENST00000573559 SUPT6HQ7KZ85 1726 aaKnown RBP33.34■■■□□ 2.93
ABR-221ENST00000573559 RICTORQ6R327 1708 aa33.33■■■□□ 2.93
ABR-221ENST00000573559 MAP3K1Q13233 1512 aa33.33■■■□□ 2.93
ABR-221ENST00000573559 CCNB3Q8WWL7 1395 aa33.33■■■□□ 2.93
ABR-221ENST00000573559 LRRC9Q6ZRR7 1453 aa33.31■■■□□ 2.92
ABR-221ENST00000573559 SCAPERQ9BY12 1400 aa33.31■■■□□ 2.92
ABR-221ENST00000573559 APLP2Q06481 763 aa33.31■■■□□ 2.92
ABR-221ENST00000573559 GPATCH8Q9UKJ3 1502 aaKnown RBP33.31■■■□□ 2.92
ABR-221ENST00000573559 ITSN2Q9NZM3 1697 aa33.27■■■□□ 2.92
ABR-221ENST00000573559 NCOA2Q15596 1464 aa33.25■■■□□ 2.91
ABR-221ENST00000573559 POGZQ7Z3K3 1410 aa33.25■■■□□ 2.91
ABR-221ENST00000573559 ABCC1P33527 1531 aa33.23■■■□□ 2.91
ABR-221ENST00000573559 KANK4Q5T7N3 995 aaPredicted RBP33.23■■■□□ 2.91
ABR-221ENST00000573559 ZNF777Q9ULD5 760 aaPredicted RBP33.23■■■□□ 2.91
ABR-221ENST00000573559 CFDP1Q9UEE9 299 aaPredicted RBP33.21■■■□□ 2.91
ABR-221ENST00000573559 SAMD9LQ8IVG5 1584 aa33.21■■■□□ 2.91
ABR-221ENST00000573559 ZMYM4Q5VZL5 1548 aa33.19■■■□□ 2.9
ABR-221ENST00000573559 ZNF518AQ6AHZ1 1483 aa33.16■■■□□ 2.9
ABR-221ENST00000573559 ARHGEF40Q8TER5 1519 aa33.15■■■□□ 2.9
ABR-221ENST00000573559 SYCP2Q9BX26 1530 aa33.13■■■□□ 2.89
ABR-221ENST00000573559 ARHGEF12Q9NZN5 1544 aa33.13■■■□□ 2.89
ABR-221ENST00000573559 ZFYVE16Q7Z3T8 1539 aa33.12■■■□□ 2.89
ABR-221ENST00000573559 TRAPPC8Q9Y2L5 1435 aa33.1■■■□□ 2.89
ABR-221ENST00000573559 KDM5CP41229 1560 aa33.09■■■□□ 2.89
ABR-221ENST00000573559 AFAP1Q8N556 730 aa33.09■■■□□ 2.89
ABR-221ENST00000573559 PLEKHH2Q8IVE3 1493 aa33.09■■■□□ 2.89
ABR-221ENST00000573559 MAGI2Q86UL8 1455 aa33.08■■■□□ 2.89
ABR-221ENST00000573559 YEATS2Q9ULM3 1422 aa33.07■■■□□ 2.88
ABR-221ENST00000573559 HECW2Q9P2P5 1572 aa33.06■■■□□ 2.88
ABR-221ENST00000573559 MYT1LQ9UL68 1186 aa33.05■■■□□ 2.88
ABR-221ENST00000573559 ZNF644Q9H582 1327 aaPredicted RBP33.03■■■□□ 2.88
ABR-221ENST00000573559 HNRNPMP52272 730 aaKnown RBP eCLIP33.03■■■□□ 2.88
ABR-221ENST00000573559 KIAA1107Q9UPP5 1409 aa33.02■■■□□ 2.88
ABR-221ENST00000573559 CAMSAP2Q08AD1 1489 aa33.01■■■□□ 2.88
ABR-221ENST00000573559 MYOM3Q5VTT5 1437 aa32.99■■■□□ 2.87
ABR-221ENST00000573559 KDM4FA0A1W2PPD8 638 aa32.96■■■□□ 2.87
ABR-221ENST00000573559 MLH3Q9UHC1 1453 aa32.96■■■□□ 2.87
ABR-221ENST00000573559 ARID4BQ4LE39 1312 aaPredicted RBP32.95■■■□□ 2.86
ABR-221ENST00000573559 AEBP2Q6ZN18 517 aaPredicted RBP32.94■■■□□ 2.86
ABR-221ENST00000573559 ABCA6Q8N139 1617 aa32.93■■■□□ 2.86
ABR-221ENST00000573559 DIP2CQ9Y2E4 1556 aa32.92■■■□□ 2.86
ABR-221ENST00000573559 KIDINS220Q9ULH0 1771 aa32.92■■■□□ 2.86
ABR-221ENST00000573559 ATP10AO60312 1499 aa32.92■■■□□ 2.86
ABR-221ENST00000573559 SPAG9O60271 1321 aaKnown RBP32.9■■■□□ 2.86
ABR-221ENST00000573559 C9orf84Q5VXU9 1444 aa32.9■■■□□ 2.86
ABR-221ENST00000573559 MIA2Q96PC5 1412 aa32.9■■■□□ 2.86
ABR-221ENST00000573559 MBD5Q9P267 1494 aa32.9■■■□□ 2.86
ABR-221ENST00000573559 SIGLEC1Q9BZZ2 1709 aa32.9■■■□□ 2.86
ABR-221ENST00000573559 ATP7AQ04656 1500 aa32.87■■■□□ 2.85
ABR-221ENST00000573559 INO80Q9ULG1 1556 aaPredicted RBP32.87■■■□□ 2.85
ABR-221ENST00000573559 CCDC141Q6ZP82 1450 aa32.86■■■□□ 2.85
ABR-221ENST00000573559 BCORL1Q5H9F3 1711 aa32.85■■■□□ 2.85
ABR-221ENST00000573559 PTPN23Q9H3S7 1636 aa32.83■■■□□ 2.85
ABR-221ENST00000573559 ARHGEF5Q12774 1597 aa32.83■■■□□ 2.85
ABR-221ENST00000573559 FGD6Q6ZV73 1430 aa32.8■■■□□ 2.84
ABR-221ENST00000573559 REREQ9P2R6 1566 aa32.79■■■□□ 2.84
ABR-221ENST00000573559 ADAMTSL3P82987 1691 aa32.78■■■□□ 2.84
ABR-221ENST00000573559 PPARGC1BQ86YN6 1023 aaKnown RBP32.78■■■□□ 2.84
ABR-221ENST00000573559 RSPH4AQ5TD94 716 aa32.76■■■□□ 2.83
ABR-221ENST00000573559 MLECQ14165 292 aa32.75■■■□□ 2.83
ABR-221ENST00000573559 MADDQ8WXG6 1647 aa32.74■■■□□ 2.83
ABR-221ENST00000573559 RTEL1-TNFRSF6BF6WH68 1400 aa32.72■■■□□ 2.83
ABR-221ENST00000573559 ADGBQ8N7X0 1667 aa32.72■■■□□ 2.83
ABR-221ENST00000573559 TCOF1Q13428 1488 aaKnown RBP32.71■■■□□ 2.83
ABR-221ENST00000573559 TSPY4P0CV99 314 aa32.69■■■□□ 2.82
ABR-221ENST00000573559 TSPY10P0CW01 314 aa32.69■■■□□ 2.82
ABR-221ENST00000573559 RIMS1Q86UR5 1692 aaKnown RBP32.68■■■□□ 2.82
ABR-221ENST00000573559 A2MP01023 1474 aa32.67■■■□□ 2.82
ABR-221ENST00000573559 AGLP35573 1532 aa32.67■■■□□ 2.82
ABR-221ENST00000573559 FER1L4A9Z1Z3 1794 aa32.67■■■□□ 2.82
ABR-221ENST00000573559 CROCC2H7BZ55 1655 aa32.66■■■□□ 2.82
ABR-221ENST00000573559 PLXNC1O60486 1568 aa32.65■■■□□ 2.82
ABR-221ENST00000573559 MAST1Q9Y2H9 1570 aa32.65■■■□□ 2.82
ABR-221ENST00000573559 DNMT1P26358 1616 aaKnown RBP32.63■■■□□ 2.81
ABR-221ENST00000573559 FAM50AQ14320 339 aaKnown RBP32.62■■■□□ 2.81
ABR-221ENST00000573559 PTPRMP28827 1452 aa32.6■■■□□ 2.81
ABR-221ENST00000573559 ABCC5O15440 1437 aa32.6■■■□□ 2.81
ABR-221ENST00000573559 DAPK1P53355 1430 aa32.6■■■□□ 2.81
ABR-221ENST00000573559 SHANK2Q9UPX8 1470 aa32.57■■■□□ 2.8
ABR-221ENST00000573559 DHX29Q7Z478 1369 aaKnown RBP32.53■■■□□ 2.8
ABR-221ENST00000573559 PLPPR3Q6T4P5 718 aa32.5■■■□□ 2.79
ABR-221ENST00000573559 ESF1Q9H501 851 aaKnown RBP32.48■■■□□ 2.79
ABR-221ENST00000573559 CHIC2Q9UKJ5 165 aa32.46■■■□□ 2.79
ABR-221ENST00000573559 GGT6Q6P531 493 aa32.45■■■□□ 2.79
ABR-221ENST00000573559 KIF3BO15066 747 aa32.43■■■□□ 2.78
ABR-221ENST00000573559 KIF15Q9NS87 1388 aa32.43■■■□□ 2.78
ABR-221ENST00000573559 DUOX2Q9NRD8 1548 aa32.42■■■□□ 2.78
ABR-221ENST00000573559 RRP7BPQ9NSQ0 103 aa32.4■■■□□ 2.78
ABR-221ENST00000573559 ANKRD30AQ9BXX3 1397 aa32.4■■■□□ 2.78
ABR-221ENST00000573559 CLTCQ00610 1675 aaKnown RBP32.39■■■□□ 2.78
ABR-221ENST00000573559 EIF2AK4Q9P2K8 1649 aaKnown RBP32.38■■■□□ 2.77
ABR-221ENST00000573559 CNTLNQ9NXG0 1405 aa32.38■■■□□ 2.77
ABR-221ENST00000573559 C3P01024 1663 aa32.36■■■□□ 2.77
ABR-221ENST00000573559 RRBP1Q9P2E9 1410 aaKnown RBP32.35■■■□□ 2.77
ABR-221ENST00000573559 ADGRL2O95490 1459 aa32.35■■■□□ 2.77
ABR-221ENST00000573559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.34■■■□□ 2.77
ABR-221ENST00000573559 MROH2AA6NES4 1674 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms