RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ARHGEF40Q8TER5 1519 aa20.42■□□□□ 0.86
NPLOC4-213ENST00000573519 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
NPLOC4-213ENST00000573519 ZMYM4Q5VZL5 1548 aa20.39■□□□□ 0.85
NPLOC4-213ENST00000573519 ZFYVE16Q7Z3T8 1539 aa20.39■□□□□ 0.85
NPLOC4-213ENST00000573519 YEATS2Q9ULM3 1422 aa20.37■□□□□ 0.85
NPLOC4-213ENST00000573519 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
NPLOC4-213ENST00000573519 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
NPLOC4-213ENST00000573519 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
NPLOC4-213ENST00000573519 CDC42BPBQ9Y5S2 1711 aa20.35■□□□□ 0.85
NPLOC4-213ENST00000573519 MYT1LQ9UL68 1186 aa20.34■□□□□ 0.85
NPLOC4-213ENST00000573519 BCORL1Q5H9F3 1711 aa20.33■□□□□ 0.85
NPLOC4-213ENST00000573519 ADAMTSL3P82987 1691 aa20.32■□□□□ 0.84
NPLOC4-213ENST00000573519 ZNF518AQ6AHZ1 1483 aa20.32■□□□□ 0.84
NPLOC4-213ENST00000573519 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
NPLOC4-213ENST00000573519 MTUS2Q5JR59 1369 aa20.31■□□□□ 0.84
NPLOC4-213ENST00000573519 ZNF777Q9ULD5 760 aaPredicted RBP20.3■□□□□ 0.84
NPLOC4-213ENST00000573519 MADDQ8WXG6 1647 aa20.3■□□□□ 0.84
NPLOC4-213ENST00000573519 CDC42BPAQ5VT25 1732 aa20.3■□□□□ 0.84
NPLOC4-213ENST00000573519 PTPRMP28827 1452 aa20.29■□□□□ 0.84
NPLOC4-213ENST00000573519 MLECQ14165 292 aa20.28■□□□□ 0.84
NPLOC4-213ENST00000573519 ABCC1P33527 1531 aa20.27■□□□□ 0.84
NPLOC4-213ENST00000573519 HECW2Q9P2P5 1572 aa20.27■□□□□ 0.84
NPLOC4-213ENST00000573519 SIGLEC1Q9BZZ2 1709 aa20.27■□□□□ 0.83
NPLOC4-213ENST00000573519 ATP10AO60312 1499 aa20.26■□□□□ 0.83
NPLOC4-213ENST00000573519 KDM5CP41229 1560 aa20.25■□□□□ 0.83
NPLOC4-213ENST00000573519 CCNB3Q8WWL7 1395 aa20.25■□□□□ 0.83
NPLOC4-213ENST00000573519 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
NPLOC4-213ENST00000573519 C9orf84Q5VXU9 1444 aa20.25■□□□□ 0.83
NPLOC4-213ENST00000573519 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
NPLOC4-213ENST00000573519 ARHGEF12Q9NZN5 1544 aa20.24■□□□□ 0.83
NPLOC4-213ENST00000573519 RIMS1Q86UR5 1692 aaKnown RBP20.24■□□□□ 0.83
NPLOC4-213ENST00000573519 TRAPPC8Q9Y2L5 1435 aa20.24■□□□□ 0.83
NPLOC4-213ENST00000573519 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
NPLOC4-213ENST00000573519 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
NPLOC4-213ENST00000573519 CFDP1Q9UEE9 299 aaPredicted RBP20.22■□□□□ 0.83
NPLOC4-213ENST00000573519 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
NPLOC4-213ENST00000573519 MLH3Q9UHC1 1453 aa20.19■□□□□ 0.82
NPLOC4-213ENST00000573519 SYCP2Q9BX26 1530 aa20.19■□□□□ 0.82
NPLOC4-213ENST00000573519 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
NPLOC4-213ENST00000573519 HNRNPMP52272 730 aaKnown RBP eCLIP20.18■□□□□ 0.82
NPLOC4-213ENST00000573519 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
NPLOC4-213ENST00000573519 ABCA6Q8N139 1617 aa20.17■□□□□ 0.82
NPLOC4-213ENST00000573519 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
NPLOC4-213ENST00000573519 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
NPLOC4-213ENST00000573519 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
NPLOC4-213ENST00000573519 SPAG9O60271 1321 aaKnown RBP20.13■□□□□ 0.81
NPLOC4-213ENST00000573519 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
NPLOC4-213ENST00000573519 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
NPLOC4-213ENST00000573519 KIAA1107Q9UPP5 1409 aa20.11■□□□□ 0.81
NPLOC4-213ENST00000573519 SUPT6HQ7KZ85 1726 aaKnown RBP20.11■□□□□ 0.81
NPLOC4-213ENST00000573519 ZNF644Q9H582 1327 aaPredicted RBP20.11■□□□□ 0.81
NPLOC4-213ENST00000573519 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
NPLOC4-213ENST00000573519 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
NPLOC4-213ENST00000573519 LRRC9Q6ZRR7 1453 aa20.06■□□□□ 0.8
NPLOC4-213ENST00000573519 ESF1Q9H501 851 aaKnown RBP20.06■□□□□ 0.8
NPLOC4-213ENST00000573519 AGLP35573 1532 aa20.06■□□□□ 0.8
NPLOC4-213ENST00000573519 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
NPLOC4-213ENST00000573519 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
NPLOC4-213ENST00000573519 CEBPAP49715 358 aaPredicted RBP20.04■□□□□ 0.8
NPLOC4-213ENST00000573519 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
NPLOC4-213ENST00000573519 CAMSAP2Q08AD1 1489 aa20.02■□□□□ 0.8
NPLOC4-213ENST00000573519 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
NPLOC4-213ENST00000573519 HSPA2P54652 639 aa20■□□□□ 0.79
NPLOC4-213ENST00000573519 APLP2Q06481 763 aa20■□□□□ 0.79
NPLOC4-213ENST00000573519 MAP3K1Q13233 1512 aa20■□□□□ 0.79
NPLOC4-213ENST00000573519 A2MP01023 1474 aa19.99■□□□□ 0.79
NPLOC4-213ENST00000573519 CCDC141Q6ZP82 1450 aa19.97■□□□□ 0.79
NPLOC4-213ENST00000573519 ADGBQ8N7X0 1667 aa19.95■□□□□ 0.78
NPLOC4-213ENST00000573519 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
NPLOC4-213ENST00000573519 C3P01024 1663 aa19.94■□□□□ 0.78
NPLOC4-213ENST00000573519 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
NPLOC4-213ENST00000573519 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
NPLOC4-213ENST00000573519 CNTLNQ9NXG0 1405 aa19.93■□□□□ 0.78
NPLOC4-213ENST00000573519 RSPH4AQ5TD94 716 aa19.93■□□□□ 0.78
NPLOC4-213ENST00000573519 GGT6Q6P531 493 aa19.93■□□□□ 0.78
NPLOC4-213ENST00000573519 MYOM3Q5VTT5 1437 aa19.91■□□□□ 0.78
NPLOC4-213ENST00000573519 UHRF1BP1Q6BDS2 1440 aa19.91■□□□□ 0.78
NPLOC4-213ENST00000573519 TSPY4P0CV99 314 aa19.9■□□□□ 0.78
NPLOC4-213ENST00000573519 TSPY10P0CW01 314 aa19.9■□□□□ 0.78
NPLOC4-213ENST00000573519 ARHGEF5Q12774 1597 aa19.9■□□□□ 0.78
NPLOC4-213ENST00000573519 DHX29Q7Z478 1369 aaKnown RBP19.88■□□□□ 0.77
NPLOC4-213ENST00000573519 CLTCQ00610 1675 aaKnown RBP19.87■□□□□ 0.77
NPLOC4-213ENST00000573519 MIA2Q96PC5 1412 aa19.87■□□□□ 0.77
NPLOC4-213ENST00000573519 ZMYM3Q14202 1370 aa19.86■□□□□ 0.77
NPLOC4-213ENST00000573519 MROH2AA6NES4 1674 aa19.86■□□□□ 0.77
NPLOC4-213ENST00000573519 KIF3BO15066 747 aa19.85■□□□□ 0.77
NPLOC4-213ENST00000573519 ILDR1Q86SU0 546 aaPredicted RBP19.85■□□□□ 0.77
NPLOC4-213ENST00000573519 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
NPLOC4-213ENST00000573519 MAST1Q9Y2H9 1570 aa19.79■□□□□ 0.76
NPLOC4-213ENST00000573519 NPATQ14207 1427 aa19.79■□□□□ 0.76
NPLOC4-213ENST00000573519 PTPN23Q9H3S7 1636 aa19.79■□□□□ 0.76
NPLOC4-213ENST00000573519 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
NPLOC4-213ENST00000573519 PTPRKQ15262 1439 aa19.76■□□□□ 0.75
NPLOC4-213ENST00000573519 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
NPLOC4-213ENST00000573519 WASHC2CQ9Y4E1 1318 aa19.76■□□□□ 0.75
NPLOC4-213ENST00000573519 KDM5DQ9BY66 1539 aa19.75■□□□□ 0.75
NPLOC4-213ENST00000573519 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
NPLOC4-213ENST00000573519 MYO3AQ8NEV4 1616 aa19.73■□□□□ 0.75
NPLOC4-213ENST00000573519 STRCQ7RTU9 1775 aa19.72■□□□□ 0.75
NPLOC4-213ENST00000573519 ABCC5O15440 1437 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms