RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 MAGI2Q86UL8 1455 aa31.72■■■□□ 2.67
HCFC1R1-204ENST00000573095 CLIP1P30622 1438 aa31.7■■■□□ 2.67
HCFC1R1-204ENST00000573095 CASKIN1Q8WXD9 1431 aa31.69■■■□□ 2.66
HCFC1R1-204ENST00000573095 CCDC18Q5T9S5 1454 aa31.69■■■□□ 2.66
HCFC1R1-204ENST00000573095 SCAPERQ9BY12 1400 aa31.68■■■□□ 2.66
HCFC1R1-204ENST00000573095 YEATS2Q9ULM3 1422 aa31.66■■■□□ 2.66
HCFC1R1-204ENST00000573095 SIGLEC1Q9BZZ2 1709 aa31.66■■■□□ 2.66
HCFC1R1-204ENST00000573095 ARID4BQ4LE39 1312 aaPredicted RBP31.66■■■□□ 2.66
HCFC1R1-204ENST00000573095 ARHGAP5Q13017 1502 aa31.62■■■□□ 2.65
HCFC1R1-204ENST00000573095 RIMS1Q86UR5 1692 aaKnown RBP31.62■■■□□ 2.65
HCFC1R1-204ENST00000573095 FYCO1Q9BQS8 1478 aa31.61■■■□□ 2.65
HCFC1R1-204ENST00000573095 EFCAB2Q5VUJ9 269 aa31.61■■■□□ 2.65
HCFC1R1-204ENST00000573095 CDC42BPBQ9Y5S2 1711 aa31.6■■■□□ 2.65
HCFC1R1-204ENST00000573095 PREX2Q70Z35 1606 aa31.59■■■□□ 2.65
HCFC1R1-204ENST00000573095 KDM5CP41229 1560 aa31.56■■■□□ 2.64
HCFC1R1-204ENST00000573095 ZNF518AQ6AHZ1 1483 aa31.56■■■□□ 2.64
HCFC1R1-204ENST00000573095 C9orf84Q5VXU9 1444 aa31.51■■■□□ 2.64
HCFC1R1-204ENST00000573095 FER1L4A9Z1Z3 1794 aa31.51■■■□□ 2.63
HCFC1R1-204ENST00000573095 ATP10AO60312 1499 aa31.5■■■□□ 2.63
HCFC1R1-204ENST00000573095 CDC42BPAQ5VT25 1732 aa31.49■■■□□ 2.63
HCFC1R1-204ENST00000573095 ABCC1P33527 1531 aa31.49■■■□□ 2.63
HCFC1R1-204ENST00000573095 ITSN2Q9NZM3 1697 aa31.46■■■□□ 2.63
HCFC1R1-204ENST00000573095 LMTK3Q96Q04 1460 aa31.45■■■□□ 2.62
HCFC1R1-204ENST00000573095 ARHGEF12Q9NZN5 1544 aa31.44■■■□□ 2.62
HCFC1R1-204ENST00000573095 DIP2CQ9Y2E4 1556 aa31.43■■■□□ 2.62
HCFC1R1-204ENST00000573095 REREQ9P2R6 1566 aa31.42■■■□□ 2.62
HCFC1R1-204ENST00000573095 ABCA6Q8N139 1617 aa31.39■■■□□ 2.62
HCFC1R1-204ENST00000573095 MLH3Q9UHC1 1453 aa31.39■■■□□ 2.62
HCFC1R1-204ENST00000573095 AFAP1Q8N556 730 aa31.37■■■□□ 2.61
HCFC1R1-204ENST00000573095 ILDR1Q86SU0 546 aaPredicted RBP31.35■■■□□ 2.61
HCFC1R1-204ENST00000573095 TRAPPC8Q9Y2L5 1435 aa31.34■■■□□ 2.61
HCFC1R1-204ENST00000573095 MLECQ14165 292 aa31.34■■■□□ 2.61
HCFC1R1-204ENST00000573095 SAMD9LQ8IVG5 1584 aa31.32■■■□□ 2.6
HCFC1R1-204ENST00000573095 KIDINS220Q9ULH0 1771 aa31.3■■■□□ 2.6
HCFC1R1-204ENST00000573095 GPATCH8Q9UKJ3 1502 aaKnown RBP31.29■■■□□ 2.6
HCFC1R1-204ENST00000573095 AGLP35573 1532 aa31.27■■■□□ 2.6
HCFC1R1-204ENST00000573095 SYCP2Q9BX26 1530 aa31.26■■■□□ 2.59
HCFC1R1-204ENST00000573095 CEP162Q5TB80 1403 aa31.24■■■□□ 2.59
HCFC1R1-204ENST00000573095 PREX1Q8TCU6 1659 aa31.23■■■□□ 2.59
HCFC1R1-204ENST00000573095 MYT1LQ9UL68 1186 aa31.23■■■□□ 2.59
HCFC1R1-204ENST00000573095 EHBP1L1Q8N3D4 1523 aa31.21■■■□□ 2.59
HCFC1R1-204ENST00000573095 PLPPR3Q6T4P5 718 aa31.21■■■□□ 2.59
HCFC1R1-204ENST00000573095 MTUS2Q5JR59 1369 aa31.2■■■□□ 2.59
HCFC1R1-204ENST00000573095 PLEKHH2Q8IVE3 1493 aa31.18■■■□□ 2.58
HCFC1R1-204ENST00000573095 KIAA1107Q9UPP5 1409 aa31.17■■■□□ 2.58
HCFC1R1-204ENST00000573095 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
HCFC1R1-204ENST00000573095 TIAM1Q13009 1591 aa31.16■■■□□ 2.58
HCFC1R1-204ENST00000573095 INO80Q9ULG1 1556 aaPredicted RBP31.15■■■□□ 2.58
HCFC1R1-204ENST00000573095 ZNF777Q9ULD5 760 aaPredicted RBP31.14■■■□□ 2.58
HCFC1R1-204ENST00000573095 C3P01024 1663 aa31.13■■■□□ 2.57
HCFC1R1-204ENST00000573095 HSPA2P54652 639 aa31.13■■■□□ 2.57
HCFC1R1-204ENST00000573095 ATP7AQ04656 1500 aa31.12■■■□□ 2.57
HCFC1R1-204ENST00000573095 CFDP1Q9UEE9 299 aaPredicted RBP31.1■■■□□ 2.57
HCFC1R1-204ENST00000573095 PLXNC1O60486 1568 aa31.08■■■□□ 2.57
HCFC1R1-204ENST00000573095 CEBPAP49715 358 aaPredicted RBP31.07■■■□□ 2.56
HCFC1R1-204ENST00000573095 SETD1BQ9UPS6 1966 aaKnown RBP31.06■■■□□ 2.56
HCFC1R1-204ENST00000573095 SPAG9O60271 1321 aaKnown RBP31.06■■■□□ 2.56
HCFC1R1-204ENST00000573095 HNRNPMP52272 730 aaKnown RBP eCLIP31.05■■■□□ 2.56
HCFC1R1-204ENST00000573095 CNTLNQ9NXG0 1405 aa31.04■■■□□ 2.56
HCFC1R1-204ENST00000573095 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
HCFC1R1-204ENST00000573095 MROH2AA6NES4 1674 aa31.03■■■□□ 2.56
HCFC1R1-204ENST00000573095 UHRF1BP1Q6BDS2 1440 aa31.03■■■□□ 2.56
HCFC1R1-204ENST00000573095 ADGBQ8N7X0 1667 aa31■■■□□ 2.55
HCFC1R1-204ENST00000573095 A2MP01023 1474 aa30.98■■■□□ 2.55
HCFC1R1-204ENST00000573095 MBD5Q9P267 1494 aa30.98■■■□□ 2.55
HCFC1R1-204ENST00000573095 FBXO41Q8TF61 875 aa30.98■■■□□ 2.55
HCFC1R1-204ENST00000573095 ESF1Q9H501 851 aaKnown RBP30.98■■■□□ 2.55
HCFC1R1-204ENST00000573095 NCOA2Q15596 1464 aa30.96■■■□□ 2.55
HCFC1R1-204ENST00000573095 STRCQ7RTU9 1775 aa30.95■■■□□ 2.55
HCFC1R1-204ENST00000573095 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
HCFC1R1-204ENST00000573095 ZNF644Q9H582 1327 aaPredicted RBP30.93■■■□□ 2.54
HCFC1R1-204ENST00000573095 CLTCQ00610 1675 aaKnown RBP30.9■■■□□ 2.54
HCFC1R1-204ENST00000573095 RTEL1-TNFRSF6BF6WH68 1400 aa30.89■■■□□ 2.53
HCFC1R1-204ENST00000573095 NPATQ14207 1427 aa30.89■■■□□ 2.53
HCFC1R1-204ENST00000573095 CAMSAP2Q08AD1 1489 aa30.88■■■□□ 2.53
HCFC1R1-204ENST00000573095 CCDC141Q6ZP82 1450 aa30.87■■■□□ 2.53
HCFC1R1-204ENST00000573095 LRRC9Q6ZRR7 1453 aa30.83■■■□□ 2.53
HCFC1R1-204ENST00000573095 ZMYM3Q14202 1370 aa30.82■■■□□ 2.52
HCFC1R1-204ENST00000573095 ARHGEF5Q12774 1597 aa30.81■■■□□ 2.52
HCFC1R1-204ENST00000573095 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
HCFC1R1-204ENST00000573095 MAP3K1Q13233 1512 aa30.81■■■□□ 2.52
HCFC1R1-204ENST00000573095 ZNF142P52746 1687 aaPredicted RBP30.78■■■□□ 2.52
HCFC1R1-204ENST00000573095 MYO3AQ8NEV4 1616 aa30.78■■■□□ 2.52
HCFC1R1-204ENST00000573095 DMRT2Q9Y5R5 561 aa30.78■■■□□ 2.52
HCFC1R1-204ENST00000573095 PPP6R1Q9UPN7 881 aa30.75■■■□□ 2.51
HCFC1R1-204ENST00000573095 DHX29Q7Z478 1369 aaKnown RBP30.75■■■□□ 2.51
HCFC1R1-204ENST00000573095 PTPRTO14522 1441 aa30.74■■■□□ 2.51
HCFC1R1-204ENST00000573095 NCOA1Q15788 1441 aa30.74■■■□□ 2.51
HCFC1R1-204ENST00000573095 PTPRKQ15262 1439 aa30.73■■■□□ 2.51
HCFC1R1-204ENST00000573095 RSPH4AQ5TD94 716 aa30.73■■■□□ 2.51
HCFC1R1-204ENST00000573095 GGT6Q6P531 493 aa30.73■■■□□ 2.51
HCFC1R1-204ENST00000573095 CERKQ8TCT0 537 aa30.73■■■□□ 2.51
HCFC1R1-204ENST00000573095 FAM135AQ9P2D6 1515 aa30.73■■■□□ 2.51
HCFC1R1-204ENST00000573095 CAMSAP1Q5T5Y3 1602 aa30.7■■■□□ 2.51
HCFC1R1-204ENST00000573095 CEP170BQ9Y4F5 1589 aaPredicted RBP30.69■■■□□ 2.5
HCFC1R1-204ENST00000573095 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
HCFC1R1-204ENST00000573095 KDM5DQ9BY66 1539 aa30.66■■■□□ 2.5
HCFC1R1-204ENST00000573095 MYOM3Q5VTT5 1437 aa30.63■■■□□ 2.49
HCFC1R1-204ENST00000573095 MIA2Q96PC5 1412 aa30.63■■■□□ 2.49
HCFC1R1-204ENST00000573095 PLA2R1Q13018 1463 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms