RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
RPA1-204ENST00000571725 AXIN2Q9Y2T1 843 aa8.3□□□□□ -1.08
RPA1-204ENST00000571725 CIZ1Q9ULV3 898 aaPredicted RBP8.28□□□□□ -1.08
RPA1-204ENST00000571725 FKBP8Q14318 412 aa8.27□□□□□ -1.09
RPA1-204ENST00000571725 STAC3Q96MF2 364 aa8.27□□□□□ -1.09
RPA1-204ENST00000571725 ADGRD1Q6QNK2 874 aa8.25□□□□□ -1.09
RPA1-204ENST00000571725 RGS20O76081 388 aa8.23□□□□□ -1.09
RPA1-204ENST00000571725 NUDT7P0C024 238 aa8.23□□□□□ -1.09
RPA1-204ENST00000571725 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.1
RPA1-204ENST00000571725 LHX6Q9UPM6 363 aa8.2□□□□□ -1.1
RPA1-204ENST00000571725 ARHGAP33O14559 1287 aa8.19□□□□□ -1.1
RPA1-204ENST00000571725 VASPP50552 380 aaPredicted RBP8.19□□□□□ -1.1
RPA1-204ENST00000571725 POTEEQ6S8J3 1075 aa8.18□□□□□ -1.1
RPA1-204ENST00000571725 SOX12O15370 315 aa8.17□□□□□ -1.1
RPA1-204ENST00000571725 PTPN5P54829 565 aa8.15□□□□□ -1.1
RPA1-204ENST00000571725 Q6ZNB5 142 aa8.15□□□□□ -1.1
RPA1-204ENST00000571725 TK2O00142 265 aa8.13□□□□□ -1.11
RPA1-204ENST00000571725 PSDA5PKW4 1024 aaPredicted RBP8.12□□□□□ -1.11
RPA1-204ENST00000571725 SPOCK2Q92563 424 aa8.12□□□□□ -1.11
RPA1-204ENST00000571725 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
RPA1-204ENST00000571725 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
RPA1-204ENST00000571725 MS4A4AQ96JQ5 239 aa8.1□□□□□ -1.11
RPA1-204ENST00000571725 HRO43593 1189 aa8.09□□□□□ -1.11
RPA1-204ENST00000571725 A0A0G2JS52 829 aa8.08□□□□□ -1.12
RPA1-204ENST00000571725 IFFO2Q5TF58 517 aa8.08□□□□□ -1.12
RPA1-204ENST00000571725 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
RPA1-204ENST00000571725 PSEN2P49810 448 aa8.06□□□□□ -1.12
RPA1-204ENST00000571725 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
RPA1-204ENST00000571725 TRIM41Q8WV44 630 aa8.06□□□□□ -1.12
RPA1-204ENST00000571725 C2orf72A6NCS6 295 aa8.05□□□□□ -1.12
RPA1-204ENST00000571725 NLRP6P59044 892 aa8.04□□□□□ -1.12
RPA1-204ENST00000571725 SLC34A2O95436 690 aa8.03□□□□□ -1.12
RPA1-204ENST00000571725 GOLGA8CPA6NN73 597 aa8.01□□□□□ -1.13
RPA1-204ENST00000571725 PPP4R3BQ5MIZ7 849 aa8.01□□□□□ -1.13
RPA1-204ENST00000571725 TMC2Q8TDI7 906 aa8.01□□□□□ -1.13
RPA1-204ENST00000571725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.99□□□□□ -1.13
RPA1-204ENST00000571725 ZFP91Q96JP5 570 aaPredicted RBP7.99□□□□□ -1.13
RPA1-204ENST00000571725 RIOK3O14730 519 aaKnown RBP7.98□□□□□ -1.13
RPA1-204ENST00000571725 KIF3CO14782 793 aa7.98□□□□□ -1.13
RPA1-204ENST00000571725 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
RPA1-204ENST00000571725 VGFO15240 615 aaPredicted RBP7.96□□□□□ -1.14
RPA1-204ENST00000571725 THSD4Q6ZMP0 1018 aa7.95□□□□□ -1.14
RPA1-204ENST00000571725 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
RPA1-204ENST00000571725 WNT2BQ93097 391 aa7.94□□□□□ -1.14
RPA1-204ENST00000571725 LAPTM4AQ15012 233 aa7.93□□□□□ -1.14
RPA1-204ENST00000571725 VPS9D1Q9Y2B5 631 aa7.93□□□□□ -1.14
RPA1-204ENST00000571725 TRAF7Q6Q0C0 670 aa7.91□□□□□ -1.14
RPA1-204ENST00000571725 MRPL50Q8N5N7 158 aaKnown RBP7.9□□□□□ -1.14
RPA1-204ENST00000571725 FBXO22Q8NEZ5 403 aa7.9□□□□□ -1.14
RPA1-204ENST00000571725 TBC1D12O60347 775 aa7.88□□□□□ -1.15
RPA1-204ENST00000571725 TAOK2Q9UL54 1235 aa7.87□□□□□ -1.15
RPA1-204ENST00000571725 GFRA3O60609 400 aa7.86□□□□□ -1.15
RPA1-204ENST00000571725 PTCD2Q8WV60 388 aaKnown RBP7.86□□□□□ -1.15
RPA1-204ENST00000571725 BCL11BQ9C0K0 894 aaPredicted RBP7.86□□□□□ -1.15
RPA1-204ENST00000571725 STK24Q9Y6E0 443 aa7.86□□□□□ -1.15
RPA1-204ENST00000571725 KDM4FA0A1W2PPD8 638 aa7.84□□□□□ -1.15
RPA1-204ENST00000571725 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
RPA1-204ENST00000571725 MFRPQ9BY79 579 aa7.83□□□□□ -1.16
RPA1-204ENST00000571725 NBPF3Q9H094 633 aa7.83□□□□□ -1.16
RPA1-204ENST00000571725 SLC4A5Q9BY07 1137 aa7.82□□□□□ -1.16
RPA1-204ENST00000571725 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
RPA1-204ENST00000571725 BHMG1C9JSJ3 638 aaPredicted RBP7.8□□□□□ -1.16
RPA1-204ENST00000571725 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
RPA1-204ENST00000571725 ZNF454Q8N9F8 522 aa7.8□□□□□ -1.16
RPA1-204ENST00000571725 PTPREP23469 700 aa7.79□□□□□ -1.16
RPA1-204ENST00000571725 KCNC4Q03721 635 aa7.78□□□□□ -1.16
RPA1-204ENST00000571725 ANKK1Q8NFD2 765 aa7.78□□□□□ -1.16
RPA1-204ENST00000571725 PLPP6Q8IY26 295 aa7.77□□□□□ -1.17
RPA1-204ENST00000571725 BCL2L12Q9HB09 334 aa7.77□□□□□ -1.17
RPA1-204ENST00000571725 STK25O00506 426 aa7.76□□□□□ -1.17
RPA1-204ENST00000571725 LCE2BO14633 110 aa7.76□□□□□ -1.17
RPA1-204ENST00000571725 ZBED2Q9BTP6 218 aa7.74□□□□□ -1.17
RPA1-204ENST00000571725 NRG2O14511 850 aaPredicted RBP7.73□□□□□ -1.17
RPA1-204ENST00000571725 FOXK1P85037 733 aa7.73□□□□□ -1.17
RPA1-204ENST00000571725 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
RPA1-204ENST00000571725 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
RPA1-204ENST00000571725 BCAMP50895 628 aa7.7□□□□□ -1.18
RPA1-204ENST00000571725 UPF1Q92900 1129 aaKnown RBP eCLIP7.68□□□□□ -1.18
RPA1-204ENST00000571725 DSG2Q14126 1118 aa7.66□□□□□ -1.18
RPA1-204ENST00000571725 PRKD2Q9BZL6 878 aa7.66□□□□□ -1.18
RPA1-204ENST00000571725 GPHNQ9NQX3 736 aaPredicted RBP7.66□□□□□ -1.18
RPA1-204ENST00000571725 SOWAHBA6NEL2 793 aa7.65□□□□□ -1.18
RPA1-204ENST00000571725 PPP1R37O75864 691 aa7.64□□□□□ -1.19
RPA1-204ENST00000571725 FOSBP53539 338 aa7.64□□□□□ -1.19
RPA1-204ENST00000571725 WBP1LQ9NX94 342 aa7.64□□□□□ -1.19
RPA1-204ENST00000571725 RABGEF1Q9UJ41 708 aa7.64□□□□□ -1.19
RPA1-204ENST00000571725 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
RPA1-204ENST00000571725 OXER1Q8TDS5 423 aa7.61□□□□□ -1.19
RPA1-204ENST00000571725 LAPTM4BQ86VI4 370 aa7.6□□□□□ -1.19
RPA1-204ENST00000571725 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
RPA1-204ENST00000571725 ADAM33Q9BZ11 813 aa7.6□□□□□ -1.19
RPA1-204ENST00000571725 PDZRN3Q9UPQ7 1066 aa7.6□□□□□ -1.19
RPA1-204ENST00000571725 PPP1R3GB7ZBB8 358 aa7.59□□□□□ -1.19
RPA1-204ENST00000571725 ZFRQ96KR1 1074 aaKnown RBP7.59□□□□□ -1.19
RPA1-204ENST00000571725 V9GY48 417 aaPredicted RBP7.58□□□□□ -1.2
RPA1-204ENST00000571725 PROX2Q3B8N5 592 aa7.57□□□□□ -1.2
RPA1-204ENST00000571725 HPS5Q9UPZ3 1129 aa7.56□□□□□ -1.2
RPA1-204ENST00000571725 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.55□□□□□ -1.2
RPA1-204ENST00000571725 TSR3Q9UJK0 312 aaKnown RBP7.55□□□□□ -1.2
RPA1-204ENST00000571725 LRCH3Q96II8 777 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms