RNA–Protein interactions for RNA: ENST00000571617.1

P4HB-216, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 3

Gene P4HB, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-216ENST00000571617 SCAPERQ9BY12 1400 aa33.79■■■■□ 3
P4HB-216ENST00000571617 ARHGAP5Q13017 1502 aa33.79■■■■□ 3
P4HB-216ENST00000571617 POGZQ7Z3K3 1410 aa33.78■■■■□ 3
P4HB-216ENST00000571617 PREX2Q70Z35 1606 aa33.77■■■■□ 3
P4HB-216ENST00000571617 MAGI2Q86UL8 1455 aa33.75■■■□□ 2.99
P4HB-216ENST00000571617 ZFYVE16Q7Z3T8 1539 aa33.73■■■□□ 2.99
P4HB-216ENST00000571617 CDC42BPAQ5VT25 1732 aa33.72■■■□□ 2.99
P4HB-216ENST00000571617 ADAMTSL3P82987 1691 aa33.71■■■□□ 2.99
P4HB-216ENST00000571617 BCORL1Q5H9F3 1711 aa33.7■■■□□ 2.99
P4HB-216ENST00000571617 YEATS2Q9ULM3 1422 aa33.66■■■□□ 2.98
P4HB-216ENST00000571617 ZNF518AQ6AHZ1 1483 aa33.65■■■□□ 2.98
P4HB-216ENST00000571617 KDM5CP41229 1560 aa33.63■■■□□ 2.97
P4HB-216ENST00000571617 LOC105371045A0A1W2PR82 267 aa33.62■■■□□ 2.97
P4HB-216ENST00000571617 ARID4BQ4LE39 1312 aaPredicted RBP33.61■■■□□ 2.97
P4HB-216ENST00000571617 ABCC1P33527 1531 aa33.61■■■□□ 2.97
P4HB-216ENST00000571617 SIGLEC1Q9BZZ2 1709 aa33.6■■■□□ 2.97
P4HB-216ENST00000571617 ITSN2Q9NZM3 1697 aa33.59■■■□□ 2.97
P4HB-216ENST00000571617 MTUS2Q5JR59 1369 aa33.57■■■□□ 2.96
P4HB-216ENST00000571617 MADDQ8WXG6 1647 aa33.57■■■□□ 2.96
P4HB-216ENST00000571617 GPATCH8Q9UKJ3 1502 aaKnown RBP33.55■■■□□ 2.96
P4HB-216ENST00000571617 HECW2Q9P2P5 1572 aa33.55■■■□□ 2.96
P4HB-216ENST00000571617 EHBP1L1Q8N3D4 1523 aa33.54■■■□□ 2.96
P4HB-216ENST00000571617 ATP10AO60312 1499 aa33.53■■■□□ 2.96
P4HB-216ENST00000571617 PTPRMP28827 1452 aa33.53■■■□□ 2.96
P4HB-216ENST00000571617 AFAP1Q8N556 730 aa33.53■■■□□ 2.96
P4HB-216ENST00000571617 ARHGEF12Q9NZN5 1544 aa33.53■■■□□ 2.96
P4HB-216ENST00000571617 SAMD9LQ8IVG5 1584 aa33.51■■■□□ 2.95
P4HB-216ENST00000571617 C9orf84Q5VXU9 1444 aa33.5■■■□□ 2.95
P4HB-216ENST00000571617 TRAPPC8Q9Y2L5 1435 aa33.48■■■□□ 2.95
P4HB-216ENST00000571617 MLH3Q9UHC1 1453 aa33.48■■■□□ 2.95
P4HB-216ENST00000571617 RIMS1Q86UR5 1692 aaKnown RBP33.47■■■□□ 2.95
P4HB-216ENST00000571617 CCNB3Q8WWL7 1395 aa33.47■■■□□ 2.95
P4HB-216ENST00000571617 VPS8Q8N3P4 1428 aa33.46■■■□□ 2.95
P4HB-216ENST00000571617 DIP2CQ9Y2E4 1556 aa33.45■■■□□ 2.95
P4HB-216ENST00000571617 TIAM1Q13009 1591 aa33.43■■■□□ 2.94
P4HB-216ENST00000571617 ABCA6Q8N139 1617 aa33.42■■■□□ 2.94
P4HB-216ENST00000571617 SYCP2Q9BX26 1530 aa33.42■■■□□ 2.94
P4HB-216ENST00000571617 REREQ9P2R6 1566 aa33.42■■■□□ 2.94
P4HB-216ENST00000571617 ZNF777Q9ULD5 760 aaPredicted RBP33.41■■■□□ 2.94
P4HB-216ENST00000571617 FER1L4A9Z1Z3 1794 aa33.4■■■□□ 2.94
P4HB-216ENST00000571617 CFDP1Q9UEE9 299 aaPredicted RBP33.4■■■□□ 2.94
P4HB-216ENST00000571617 KIDINS220Q9ULH0 1771 aa33.39■■■□□ 2.94
P4HB-216ENST00000571617 PLEKHH2Q8IVE3 1493 aa33.39■■■□□ 2.94
P4HB-216ENST00000571617 MYT1LQ9UL68 1186 aa33.39■■■□□ 2.94
P4HB-216ENST00000571617 KIAA1107Q9UPP5 1409 aa33.38■■■□□ 2.93
P4HB-216ENST00000571617 SUPT6HQ7KZ85 1726 aaKnown RBP33.38■■■□□ 2.93
P4HB-216ENST00000571617 MLECQ14165 292 aa33.32■■■□□ 2.92
P4HB-216ENST00000571617 NCOA2Q15596 1464 aa33.3■■■□□ 2.92
P4HB-216ENST00000571617 HNRNPMP52272 730 aaKnown RBP eCLIP33.29■■■□□ 2.921e-7■□□□□ 8.4
P4HB-216ENST00000571617 AGLP35573 1532 aa33.28■■■□□ 2.92
P4HB-216ENST00000571617 MAP3K1Q13233 1512 aa33.28■■■□□ 2.92
P4HB-216ENST00000571617 INO80Q9ULG1 1556 aaPredicted RBP33.26■■■□□ 2.91
P4HB-216ENST00000571617 LRRC9Q6ZRR7 1453 aa33.25■■■□□ 2.91
P4HB-216ENST00000571617 ATP7AQ04656 1500 aa33.24■■■□□ 2.91
P4HB-216ENST00000571617 SPAG9O60271 1321 aaKnown RBP33.24■■■□□ 2.91
P4HB-216ENST00000571617 ZNF644Q9H582 1327 aaPredicted RBP33.2■■■□□ 2.91
P4HB-216ENST00000571617 MBD5Q9P267 1494 aa33.19■■■□□ 2.9
P4HB-216ENST00000571617 LMTK3Q96Q04 1460 aa33.16■■■□□ 2.9
P4HB-216ENST00000571617 CAMSAP2Q08AD1 1489 aa33.14■■■□□ 2.9
P4HB-216ENST00000571617 ADGBQ8N7X0 1667 aa33.13■■■□□ 2.89
P4HB-216ENST00000571617 PLXNC1O60486 1568 aa33.12■■■□□ 2.89
P4HB-216ENST00000571617 PLPPR3Q6T4P5 718 aa33.11■■■□□ 2.89
P4HB-216ENST00000571617 KANK4Q5T7N3 995 aaPredicted RBP33.1■■■□□ 2.89
P4HB-216ENST00000571617 A2MP01023 1474 aa33.08■■■□□ 2.89
P4HB-216ENST00000571617 RTEL1-TNFRSF6BF6WH68 1400 aa33.08■■■□□ 2.89
P4HB-216ENST00000571617 CCDC141Q6ZP82 1450 aa33.06■■■□□ 2.88
P4HB-216ENST00000571617 C3P01024 1663 aa33.05■■■□□ 2.88
P4HB-216ENST00000571617 ARHGEF5Q12774 1597 aa33.04■■■□□ 2.88
P4HB-216ENST00000571617 PREX1Q8TCU6 1659 aa33.04■■■□□ 2.88
P4HB-216ENST00000571617 RSPH4AQ5TD94 716 aa33.04■■■□□ 2.88
P4HB-216ENST00000571617 SETD1BQ9UPS6 1966 aaKnown RBP33.03■■■□□ 2.88
P4HB-216ENST00000571617 CNTLNQ9NXG0 1405 aa33.02■■■□□ 2.88
P4HB-216ENST00000571617 CEBPAP49715 358 aaPredicted RBP33.01■■■□□ 2.87
P4HB-216ENST00000571617 ESF1Q9H501 851 aaKnown RBP33.01■■■□□ 2.87
P4HB-216ENST00000571617 APLP2Q06481 763 aa33■■■□□ 2.87
P4HB-216ENST00000571617 MROH2AA6NES4 1674 aa33■■■□□ 2.87
P4HB-216ENST00000571617 MYOM3Q5VTT5 1437 aa32.99■■■□□ 2.87
P4HB-216ENST00000571617 MIA2Q96PC5 1412 aa32.98■■■□□ 2.87
P4HB-216ENST00000571617 DHX29Q7Z478 1369 aaKnown RBP32.91■■■□□ 2.86
P4HB-216ENST00000571617 CLTCQ00610 1675 aaKnown RBP32.91■■■□□ 2.86
P4HB-216ENST00000571617 HSPA2P54652 639 aa32.9■■■□□ 2.86
P4HB-216ENST00000571617 MAST1Q9Y2H9 1570 aa32.88■■■□□ 2.85
P4HB-216ENST00000571617 TSPY4P0CV99 314 aa32.87■■■□□ 2.85
P4HB-216ENST00000571617 TSPY10P0CW01 314 aa32.87■■■□□ 2.85
P4HB-216ENST00000571617 UHRF1BP1Q6BDS2 1440 aa32.86■■■□□ 2.85
P4HB-216ENST00000571617 GGT6Q6P531 493 aa32.84■■■□□ 2.85
P4HB-216ENST00000571617 PPP6R1Q9UPN7 881 aa32.84■■■□□ 2.85
P4HB-216ENST00000571617 ZMYM3Q14202 1370 aa32.83■■■□□ 2.85
P4HB-216ENST00000571617 PTPN23Q9H3S7 1636 aa32.81■■■□□ 2.84
P4HB-216ENST00000571617 NPATQ14207 1427 aa32.81■■■□□ 2.84
P4HB-216ENST00000571617 CROCC2H7BZ55 1655 aa32.77■■■□□ 2.84
P4HB-216ENST00000571617 FAM135AQ9P2D6 1515 aa32.76■■■□□ 2.83
P4HB-216ENST00000571617 KIF3BO15066 747 aa32.75■■■□□ 2.83
P4HB-216ENST00000571617 FGD6Q6ZV73 1430 aa32.74■■■□□ 2.83
P4HB-216ENST00000571617 STRCQ7RTU9 1775 aa32.72■■■□□ 2.83
P4HB-216ENST00000571617 TCOF1Q13428 1488 aaKnown RBP32.72■■■□□ 2.83
P4HB-216ENST00000571617 EIF2AK4Q9P2K8 1649 aaKnown RBP32.7■■■□□ 2.83
P4HB-216ENST00000571617 PTPRKQ15262 1439 aa32.7■■■□□ 2.83
P4HB-216ENST00000571617 SHANK2Q9UPX8 1470 aa32.7■■■□□ 2.83
P4HB-216ENST00000571617 KDM5DQ9BY66 1539 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms