RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 TCOF1Q13428 1488 aaKnown RBP23.5■■□□□ 1.35
PCDHB19P-201ENST00000570871 KDM6BO15054 1643 aa23.49■■□□□ 1.35
PCDHB19P-201ENST00000570871 KIAA0556O60303 1618 aa23.49■■□□□ 1.35
PCDHB19P-201ENST00000570871 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
PCDHB19P-201ENST00000570871 AKNAQ7Z591 1439 aa23.44■■□□□ 1.34
PCDHB19P-201ENST00000570871 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
PCDHB19P-201ENST00000570871 IRX6P78412 446 aaPredicted RBP23.42■■□□□ 1.34
PCDHB19P-201ENST00000570871 CNTLNQ9NXG0 1405 aa23.39■■□□□ 1.34
PCDHB19P-201ENST00000570871 MPHOSPH9Q99550 1183 aa23.39■■□□□ 1.33
PCDHB19P-201ENST00000570871 EPRSP07814 1512 aaKnown RBP23.39■■□□□ 1.33
PCDHB19P-201ENST00000570871 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
PCDHB19P-201ENST00000570871 CCDC184Q52MB2 194 aa23.36■■□□□ 1.33
PCDHB19P-201ENST00000570871 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
PCDHB19P-201ENST00000570871 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
PCDHB19P-201ENST00000570871 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
PCDHB19P-201ENST00000570871 FOXD1Q16676 465 aa23.35■■□□□ 1.33
PCDHB19P-201ENST00000570871 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
PCDHB19P-201ENST00000570871 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
PCDHB19P-201ENST00000570871 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
PCDHB19P-201ENST00000570871 CCDC7Q96M83 1385 aa23.32■■□□□ 1.32
PCDHB19P-201ENST00000570871 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
PCDHB19P-201ENST00000570871 CARMIL2Q6F5E8 1435 aa23.31■■□□□ 1.32
PCDHB19P-201ENST00000570871 MSH5O43196 834 aa23.31■■□□□ 1.32
PCDHB19P-201ENST00000570871 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
PCDHB19P-201ENST00000570871 CDK11AQ9UQ88 783 aaPredicted RBP23.29■■□□□ 1.32
PCDHB19P-201ENST00000570871 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
PCDHB19P-201ENST00000570871 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
PCDHB19P-201ENST00000570871 NBPF8Q3BBV2 869 aa23.26■■□□□ 1.31
PCDHB19P-201ENST00000570871 ANKRD30BQ9BXX2 1392 aa23.26■■□□□ 1.31
PCDHB19P-201ENST00000570871 ERICH6BQ5W0A0 696 aa23.26■■□□□ 1.31
PCDHB19P-201ENST00000570871 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
PCDHB19P-201ENST00000570871 RAPGEF6Q8TEU7 1601 aa23.25■■□□□ 1.31
PCDHB19P-201ENST00000570871 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
PCDHB19P-201ENST00000570871 FAM9BQ8IZU0 186 aa23.25■■□□□ 1.31
PCDHB19P-201ENST00000570871 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
PCDHB19P-201ENST00000570871 DAPK1P53355 1430 aa23.23■■□□□ 1.31
PCDHB19P-201ENST00000570871 FANCIQ9NVI1 1328 aa23.23■■□□□ 1.31
PCDHB19P-201ENST00000570871 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
PCDHB19P-201ENST00000570871 POLR1AO95602 1720 aaPredicted RBP23.23■■□□□ 1.31
PCDHB19P-201ENST00000570871 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
PCDHB19P-201ENST00000570871 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
PCDHB19P-201ENST00000570871 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.31
PCDHB19P-201ENST00000570871 SPATA31E1Q6ZUB1 1445 aa23.19■■□□□ 1.3
PCDHB19P-201ENST00000570871 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
PCDHB19P-201ENST00000570871 ABCC5O15440 1437 aa23.19■■□□□ 1.3
PCDHB19P-201ENST00000570871 KIF7Q2M1P5 1343 aa23.18■■□□□ 1.3
PCDHB19P-201ENST00000570871 PTPRGP23470 1445 aa23.18■■□□□ 1.3
PCDHB19P-201ENST00000570871 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
PCDHB19P-201ENST00000570871 SLC4A1APQ9BWU0 796 aaKnown RBP23.15■■□□□ 1.3
PCDHB19P-201ENST00000570871 ABCA8O94911 1581 aa23.14■■□□□ 1.3
PCDHB19P-201ENST00000570871 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
PCDHB19P-201ENST00000570871 BCL11AQ9H165 835 aa23.12■■□□□ 1.29
PCDHB19P-201ENST00000570871 B4GALNT3Q6L9W6 998 aa23.09■■□□□ 1.29
PCDHB19P-201ENST00000570871 PZPP20742 1482 aa23.07■■□□□ 1.28
PCDHB19P-201ENST00000570871 ATP10BO94823 1461 aa23.06■■□□□ 1.28
PCDHB19P-201ENST00000570871 ERICH6Q7L0X2 663 aa23.03■■□□□ 1.28
PCDHB19P-201ENST00000570871 BCORL1Q5H9F3 1711 aa23.03■■□□□ 1.28
PCDHB19P-201ENST00000570871 DHX29Q7Z478 1369 aaKnown RBP23.02■■□□□ 1.28
PCDHB19P-201ENST00000570871 MBD5Q9P267 1494 aa23.02■■□□□ 1.28
PCDHB19P-201ENST00000570871 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
PCDHB19P-201ENST00000570871 CAMSAP2Q08AD1 1489 aa22.99■■□□□ 1.27
PCDHB19P-201ENST00000570871 SMG6Q86US8 1419 aaKnown RBP22.97■■□□□ 1.27
PCDHB19P-201ENST00000570871 USP47Q96K76 1375 aa22.97■■□□□ 1.27
PCDHB19P-201ENST00000570871 KIF14Q15058 1648 aa22.97■■□□□ 1.27
PCDHB19P-201ENST00000570871 CNGB1Q14028 1251 aaPredicted RBP22.97■■□□□ 1.27
PCDHB19P-201ENST00000570871 KIAA1107Q9UPP5 1409 aa22.96■■□□□ 1.27
PCDHB19P-201ENST00000570871 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.27
PCDHB19P-201ENST00000570871 ZNF326Q5BKZ1 582 aaKnown RBP22.95■■□□□ 1.26
PCDHB19P-201ENST00000570871 POLR3GLQ9BT43 218 aa22.95■■□□□ 1.26
PCDHB19P-201ENST00000570871 CFDP1Q9UEE9 299 aaPredicted RBP22.95■■□□□ 1.26
PCDHB19P-201ENST00000570871 TROQ12816 1431 aaPredicted RBP22.95■■□□□ 1.26
PCDHB19P-201ENST00000570871 KDM5CP41229 1560 aa22.93■■□□□ 1.26
PCDHB19P-201ENST00000570871 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
PCDHB19P-201ENST00000570871 ABCC2Q92887 1545 aa22.93■■□□□ 1.26
PCDHB19P-201ENST00000570871 GPATCH8Q9UKJ3 1502 aaKnown RBP22.91■■□□□ 1.26
PCDHB19P-201ENST00000570871 PLEKHD1A6NEE1 506 aa22.91■■□□□ 1.26
PCDHB19P-201ENST00000570871 PKD2Q13563 968 aa22.91■■□□□ 1.26
PCDHB19P-201ENST00000570871 NUDCQ9Y266 331 aa22.91■■□□□ 1.26
PCDHB19P-201ENST00000570871 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
PCDHB19P-201ENST00000570871 ZNF777Q9ULD5 760 aaPredicted RBP22.9■■□□□ 1.26
PCDHB19P-201ENST00000570871 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
PCDHB19P-201ENST00000570871 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
PCDHB19P-201ENST00000570871 ADCY10Q96PN6 1610 aa22.87■■□□□ 1.25
PCDHB19P-201ENST00000570871 ANKRD30AQ9BXX3 1397 aa22.84■■□□□ 1.25
PCDHB19P-201ENST00000570871 ZCCHC11Q5TAX3 1644 aaKnown RBP22.84■■□□□ 1.25
PCDHB19P-201ENST00000570871 SENP3-EIF4A1A0A087X0R7 540 aa22.84■■□□□ 1.25
PCDHB19P-201ENST00000570871 PNISRQ8TF01 805 aaKnown RBP22.84■■□□□ 1.25
PCDHB19P-201ENST00000570871 UHRF1BP1Q6BDS2 1440 aa22.83■■□□□ 1.24
PCDHB19P-201ENST00000570871 ANKRD50Q9ULJ7 1429 aa22.83■■□□□ 1.24
PCDHB19P-201ENST00000570871 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
PCDHB19P-201ENST00000570871 CCDC136Q96JN2 1154 aa22.81■■□□□ 1.24
PCDHB19P-201ENST00000570871 ROCK2O75116 1388 aaKnown RBP22.8■■□□□ 1.24
PCDHB19P-201ENST00000570871 UHRF1BP1LA0JNW5 1464 aa22.8■■□□□ 1.24
PCDHB19P-201ENST00000570871 TMC1Q8TDI8 760 aa22.79■■□□□ 1.24
PCDHB19P-201ENST00000570871 ABCC10Q5T3U5 1492 aa22.78■■□□□ 1.24
PCDHB19P-201ENST00000570871 CARD11Q9BXL7 1154 aa22.78■■□□□ 1.24
PCDHB19P-201ENST00000570871 CDC42BPAQ5VT25 1732 aa22.78■■□□□ 1.24
PCDHB19P-201ENST00000570871 NUP155O75694 1391 aa22.76■■□□□ 1.23
PCDHB19P-201ENST00000570871 NOP58Q9Y2X3 529 aaKnown RBP22.76■■□□□ 1.23
PCDHB19P-201ENST00000570871 ARHGEF12Q9NZN5 1544 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms