RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
ABR-208ENST00000570688 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
ABR-208ENST00000570688 ARHGEF12Q9NZN5 1544 aa17.61■□□□□ 0.41
ABR-208ENST00000570688 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
ABR-208ENST00000570688 RICTORQ6R327 1708 aa17.59■□□□□ 0.41
ABR-208ENST00000570688 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
ABR-208ENST00000570688 CFAP74Q9C0B2 1584 aa17.57■□□□□ 0.4
ABR-208ENST00000570688 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
ABR-208ENST00000570688 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
ABR-208ENST00000570688 ABCC1P33527 1531 aa17.56■□□□□ 0.4
ABR-208ENST00000570688 CCNB3Q8WWL7 1395 aa17.55■□□□□ 0.4
ABR-208ENST00000570688 ZNF644Q9H582 1327 aaPredicted RBP17.55■□□□□ 0.4
ABR-208ENST00000570688 ADGRL1O94910 1474 aa17.55■□□□□ 0.4
ABR-208ENST00000570688 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
ABR-208ENST00000570688 SCAPERQ9BY12 1400 aa17.54■□□□□ 0.4
ABR-208ENST00000570688 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
ABR-208ENST00000570688 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
ABR-208ENST00000570688 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
ABR-208ENST00000570688 DENND4BO75064 1496 aaPredicted RBP17.51■□□□□ 0.39
ABR-208ENST00000570688 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
ABR-208ENST00000570688 SYCP2Q9BX26 1530 aa17.5■□□□□ 0.39
ABR-208ENST00000570688 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
ABR-208ENST00000570688 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
ABR-208ENST00000570688 MBD5Q9P267 1494 aa17.49■□□□□ 0.39
ABR-208ENST00000570688 KDM5CP41229 1560 aa17.49■□□□□ 0.39
ABR-208ENST00000570688 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
ABR-208ENST00000570688 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
ABR-208ENST00000570688 APLP2Q06481 763 aa17.47■□□□□ 0.39
ABR-208ENST00000570688 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
ABR-208ENST00000570688 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
ABR-208ENST00000570688 CAMSAP2Q08AD1 1489 aa17.47■□□□□ 0.39
ABR-208ENST00000570688 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
ABR-208ENST00000570688 HNRNPMP52272 730 aaKnown RBP eCLIP17.46■□□□□ 0.39
ABR-208ENST00000570688 KIAA1107Q9UPP5 1409 aa17.45■□□□□ 0.38
ABR-208ENST00000570688 KIDINS220Q9ULH0 1771 aa17.43■□□□□ 0.38
ABR-208ENST00000570688 FGD6Q6ZV73 1430 aa17.42■□□□□ 0.38
ABR-208ENST00000570688 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
ABR-208ENST00000570688 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
ABR-208ENST00000570688 ARHGEF40Q8TER5 1519 aa17.42■□□□□ 0.38
ABR-208ENST00000570688 PTPN23Q9H3S7 1636 aa17.41■□□□□ 0.38
ABR-208ENST00000570688 TCOF1Q13428 1488 aaKnown RBP17.4■□□□□ 0.38
ABR-208ENST00000570688 ABCA6Q8N139 1617 aa17.39■□□□□ 0.38
ABR-208ENST00000570688 PLEKHH2Q8IVE3 1493 aa17.39■□□□□ 0.37
ABR-208ENST00000570688 HECW2Q9P2P5 1572 aa17.39■□□□□ 0.37
ABR-208ENST00000570688 MLH3Q9UHC1 1453 aa17.38■□□□□ 0.37
ABR-208ENST00000570688 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
ABR-208ENST00000570688 DIP2CQ9Y2E4 1556 aa17.38■□□□□ 0.37
ABR-208ENST00000570688 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
ABR-208ENST00000570688 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
ABR-208ENST00000570688 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
ABR-208ENST00000570688 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
ABR-208ENST00000570688 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.37
ABR-208ENST00000570688 ABCC5O15440 1437 aa17.32■□□□□ 0.36
ABR-208ENST00000570688 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
ABR-208ENST00000570688 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
ABR-208ENST00000570688 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
ABR-208ENST00000570688 ATP10AO60312 1499 aa17.3■□□□□ 0.36
ABR-208ENST00000570688 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
ABR-208ENST00000570688 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
ABR-208ENST00000570688 MAST1Q9Y2H9 1570 aa17.29■□□□□ 0.36
ABR-208ENST00000570688 KDM4FA0A1W2PPD8 638 aa17.29■□□□□ 0.36
ABR-208ENST00000570688 DAPK1P53355 1430 aa17.28■□□□□ 0.36
ABR-208ENST00000570688 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
ABR-208ENST00000570688 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
ABR-208ENST00000570688 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
ABR-208ENST00000570688 PLXNC1O60486 1568 aa17.27■□□□□ 0.35
ABR-208ENST00000570688 C9orf84Q5VXU9 1444 aa17.26■□□□□ 0.35
ABR-208ENST00000570688 BCORL1Q5H9F3 1711 aa17.25■□□□□ 0.35
ABR-208ENST00000570688 ADAMTSL3P82987 1691 aa17.24■□□□□ 0.35
ABR-208ENST00000570688 FAM50AQ14320 339 aaKnown RBP17.23■□□□□ 0.35
ABR-208ENST00000570688 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
ABR-208ENST00000570688 RSPH4AQ5TD94 716 aa17.22■□□□□ 0.35
ABR-208ENST00000570688 AGLP35573 1532 aa17.21■□□□□ 0.35
ABR-208ENST00000570688 A2MP01023 1474 aa17.21■□□□□ 0.35
ABR-208ENST00000570688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
ABR-208ENST00000570688 MYT1LQ9UL68 1186 aa17.19■□□□□ 0.34
ABR-208ENST00000570688 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
ABR-208ENST00000570688 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
ABR-208ENST00000570688 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
ABR-208ENST00000570688 DHX29Q7Z478 1369 aaKnown RBP17.17■□□□□ 0.34
ABR-208ENST00000570688 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
ABR-208ENST00000570688 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
ABR-208ENST00000570688 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
ABR-208ENST00000570688 MLECQ14165 292 aa17.14■□□□□ 0.33
ABR-208ENST00000570688 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
ABR-208ENST00000570688 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
ABR-208ENST00000570688 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
ABR-208ENST00000570688 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
ABR-208ENST00000570688 RIMS1Q86UR5 1692 aaKnown RBP17.12■□□□□ 0.33
ABR-208ENST00000570688 FER1L4A9Z1Z3 1794 aa17.11■□□□□ 0.33
ABR-208ENST00000570688 ITGAEP38570 1179 aa17.11■□□□□ 0.33
ABR-208ENST00000570688 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
ABR-208ENST00000570688 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
ABR-208ENST00000570688 EIF2AK4Q9P2K8 1649 aaKnown RBP17.08■□□□□ 0.32
ABR-208ENST00000570688 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
ABR-208ENST00000570688 PTPRMP28827 1452 aa17.07■□□□□ 0.32
ABR-208ENST00000570688 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
ABR-208ENST00000570688 KIF3BO15066 747 aa17.07■□□□□ 0.32
ABR-208ENST00000570688 DEPDC5O75140 1603 aa17.05■□□□□ 0.32
ABR-208ENST00000570688 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms