RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ESF1Q9H501 851 aaKnown RBP14.64□□□□□ -0.07
SMG1-216ENST00000569122 PTPRTO14522 1441 aa14.64□□□□□ -0.07
SMG1-216ENST00000569122 C9orf84Q5VXU9 1444 aa14.64□□□□□ -0.07
SMG1-216ENST00000569122 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
SMG1-216ENST00000569122 RICTORQ6R327 1708 aa14.63□□□□□ -0.07
SMG1-216ENST00000569122 PLCH2O75038 1416 aa14.63□□□□□ -0.07
SMG1-216ENST00000569122 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
SMG1-216ENST00000569122 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
SMG1-216ENST00000569122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMG1-216ENST00000569122 ARHGEF12Q9NZN5 1544 aa14.61□□□□□ -0.07
SMG1-216ENST00000569122 RANGAP1P46060 587 aaPredicted RBP14.61□□□□□ -0.07
SMG1-216ENST00000569122 MYT1LQ9UL68 1186 aa14.6□□□□□ -0.07
SMG1-216ENST00000569122 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
SMG1-216ENST00000569122 HECW1Q76N89 1606 aa14.59□□□□□ -0.07
SMG1-216ENST00000569122 SPATA31D1Q6ZQQ2 1576 aa14.58□□□□□ -0.08
SMG1-216ENST00000569122 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
SMG1-216ENST00000569122 FER1L4A9Z1Z3 1794 aa14.57□□□□□ -0.08
SMG1-216ENST00000569122 TRAPPC8Q9Y2L5 1435 aa14.55□□□□□ -0.08
SMG1-216ENST00000569122 ZNF518AQ6AHZ1 1483 aa14.55□□□□□ -0.08
SMG1-216ENST00000569122 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
SMG1-216ENST00000569122 EEA1Q15075 1411 aa14.52□□□□□ -0.08
SMG1-216ENST00000569122 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
SMG1-216ENST00000569122 ATP1B4Q9UN42 357 aaPredicted RBP14.51□□□□□ -0.09
SMG1-216ENST00000569122 UBAP1LF5GYI3 381 aa14.5□□□□□ -0.09
SMG1-216ENST00000569122 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
SMG1-216ENST00000569122 STRCQ7RTU9 1775 aa14.49□□□□□ -0.09
SMG1-216ENST00000569122 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
SMG1-216ENST00000569122 NCOA1Q15788 1441 aa14.48□□□□□ -0.09
SMG1-216ENST00000569122 PKD2Q13563 968 aa14.47□□□□□ -0.09
SMG1-216ENST00000569122 LTBP4Q8N2S1 1624 aa14.47□□□□□ -0.09
SMG1-216ENST00000569122 CLIP1P30622 1438 aa14.46□□□□□ -0.09
SMG1-216ENST00000569122 FMN1Q68DA7 1419 aa14.46□□□□□ -0.09
SMG1-216ENST00000569122 MLH3Q9UHC1 1453 aa14.45□□□□□ -0.1
SMG1-216ENST00000569122 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
SMG1-216ENST00000569122 REREQ9P2R6 1566 aa14.44□□□□□ -0.1
SMG1-216ENST00000569122 NPATQ14207 1427 aa14.44□□□□□ -0.1
SMG1-216ENST00000569122 AGLP35573 1532 aa14.44□□□□□ -0.1
SMG1-216ENST00000569122 CDK13Q14004 1512 aaKnown RBP14.44□□□□□ -0.1
SMG1-216ENST00000569122 ARHGAP5Q13017 1502 aa14.43□□□□□ -0.1
SMG1-216ENST00000569122 KDM5CP41229 1560 aa14.43□□□□□ -0.1
SMG1-216ENST00000569122 TROQ12816 1431 aaPredicted RBP14.42□□□□□ -0.1
SMG1-216ENST00000569122 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
SMG1-216ENST00000569122 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
SMG1-216ENST00000569122 ZMYM3Q14202 1370 aa14.4□□□□□ -0.1
SMG1-216ENST00000569122 TOM1O60784 492 aa14.4□□□□□ -0.1
SMG1-216ENST00000569122 DIP2CQ9Y2E4 1556 aa14.38□□□□□ -0.11
SMG1-216ENST00000569122 KIF14Q15058 1648 aa14.37□□□□□ -0.11
SMG1-216ENST00000569122 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
SMG1-216ENST00000569122 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
SMG1-216ENST00000569122 MYO5CQ9NQX4 1742 aa14.37□□□□□ -0.11
SMG1-216ENST00000569122 CAMSAP1Q5T5Y3 1602 aa14.36□□□□□ -0.11
SMG1-216ENST00000569122 PLA2R1Q13018 1463 aa14.36□□□□□ -0.11
SMG1-216ENST00000569122 C3P01024 1663 aa14.35□□□□□ -0.11
SMG1-216ENST00000569122 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
SMG1-216ENST00000569122 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
SMG1-216ENST00000569122 HSPA1LP34931 641 aa14.33□□□□□ -0.12
SMG1-216ENST00000569122 SPAG9O60271 1321 aaKnown RBP14.33□□□□□ -0.12
SMG1-216ENST00000569122 PIP4K2BP78356 416 aa14.31□□□□□ -0.12
SMG1-216ENST00000569122 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
SMG1-216ENST00000569122 ABCA6Q8N139 1617 aa14.3□□□□□ -0.12
SMG1-216ENST00000569122 ABCC1P33527 1531 aa14.28□□□□□ -0.12
SMG1-216ENST00000569122 GGT6Q6P531 493 aa14.28□□□□□ -0.12
SMG1-216ENST00000569122 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
SMG1-216ENST00000569122 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
SMG1-216ENST00000569122 PTPRKQ15262 1439 aa14.26□□□□□ -0.13
SMG1-216ENST00000569122 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
SMG1-216ENST00000569122 CPS1P31327 1500 aa14.25□□□□□ -0.13
SMG1-216ENST00000569122 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
SMG1-216ENST00000569122 HNRNPMP52272 730 aaKnown RBP eCLIP14.24□□□□□ -0.133e-6■□□□□ 9
SMG1-216ENST00000569122 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
SMG1-216ENST00000569122 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
SMG1-216ENST00000569122 MED1Q15648 1581 aaPredicted RBP14.23□□□□□ -0.13
SMG1-216ENST00000569122 THEMISQ8N1K5 641 aaPredicted RBP14.23□□□□□ -0.13
SMG1-216ENST00000569122 CEP170BQ9Y4F5 1589 aaPredicted RBP14.22□□□□□ -0.13
SMG1-216ENST00000569122 CFDP1Q9UEE9 299 aaPredicted RBP14.22□□□□□ -0.13
SMG1-216ENST00000569122 A2MP01023 1474 aa14.22□□□□□ -0.13
SMG1-216ENST00000569122 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
SMG1-216ENST00000569122 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
SMG1-216ENST00000569122 A2ML1A8K2U0 1454 aa14.21□□□□□ -0.13
SMG1-216ENST00000569122 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
SMG1-216ENST00000569122 SAMD9LQ8IVG5 1584 aa14.21□□□□□ -0.14
SMG1-216ENST00000569122 SHANK2Q9UPX8 1470 aa14.2□□□□□ -0.14
SMG1-216ENST00000569122 PREX2Q70Z35 1606 aa14.2□□□□□ -0.14
SMG1-216ENST00000569122 CASKIN1Q8WXD9 1431 aa14.2□□□□□ -0.14
SMG1-216ENST00000569122 CDC42BPBQ9Y5S2 1711 aa14.19□□□□□ -0.14
SMG1-216ENST00000569122 ZNF142P52746 1687 aaPredicted RBP14.18□□□□□ -0.14
SMG1-216ENST00000569122 ITSN2Q9NZM3 1697 aa14.18□□□□□ -0.14
SMG1-216ENST00000569122 MYO3AQ8NEV4 1616 aa14.17□□□□□ -0.14
SMG1-216ENST00000569122 TNRQ92752 1358 aa14.17□□□□□ -0.14
SMG1-216ENST00000569122 ATP7AQ04656 1500 aa14.15□□□□□ -0.14
SMG1-216ENST00000569122 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
SMG1-216ENST00000569122 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
SMG1-216ENST00000569122 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
SMG1-216ENST00000569122 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
SMG1-216ENST00000569122 DHX29Q7Z478 1369 aaKnown RBP14.13□□□□□ -0.15
SMG1-216ENST00000569122 WASHC2CQ9Y4E1 1318 aa14.13□□□□□ -0.15
SMG1-216ENST00000569122 CLTCQ00610 1675 aaKnown RBP14.12□□□□□ -0.15
SMG1-216ENST00000569122 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
SMG1-216ENST00000569122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMG1-216ENST00000569122 RTEL1-TNFRSF6BF6WH68 1400 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms