RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 FMN1Q68DA7 1419 aa25.43■■□□□ 1.66
PKD1-236ENST00000568796 LMTK3Q96Q04 1460 aa25.42■■□□□ 1.66
PKD1-236ENST00000568796 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
PKD1-236ENST00000568796 EFCAB2Q5VUJ9 269 aa25.4■■□□□ 1.66
PKD1-236ENST00000568796 HECW1Q76N89 1606 aa25.4■■□□□ 1.66
PKD1-236ENST00000568796 HSPA2P54652 639 aa25.39■■□□□ 1.66
PKD1-236ENST00000568796 ARHGAP35Q9NRY4 1499 aa25.37■■□□□ 1.65
PKD1-236ENST00000568796 SIGLEC1Q9BZZ2 1709 aa25.34■■□□□ 1.65
PKD1-236ENST00000568796 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
PKD1-236ENST00000568796 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
PKD1-236ENST00000568796 MYO5CQ9NQX4 1742 aa25.32■■□□□ 1.64
PKD1-236ENST00000568796 ATP10AO60312 1499 aa25.3■■□□□ 1.64
PKD1-236ENST00000568796 KIF14Q15058 1648 aa25.29■■□□□ 1.64
PKD1-236ENST00000568796 CLIP1P30622 1438 aa25.29■■□□□ 1.64
PKD1-236ENST00000568796 TROQ12816 1431 aaPredicted RBP25.29■■□□□ 1.64
PKD1-236ENST00000568796 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
PKD1-236ENST00000568796 FER1L4A9Z1Z3 1794 aa25.28■■□□□ 1.64
PKD1-236ENST00000568796 ARHGAP5Q13017 1502 aa25.27■■□□□ 1.64
PKD1-236ENST00000568796 AFAP1Q8N556 730 aa25.26■■□□□ 1.63
PKD1-236ENST00000568796 ZNF518AQ6AHZ1 1483 aa25.23■■□□□ 1.63
PKD1-236ENST00000568796 CEBPAP49715 358 aaPredicted RBP25.22■■□□□ 1.63
PKD1-236ENST00000568796 ARHGEF12Q9NZN5 1544 aa25.21■■□□□ 1.63
PKD1-236ENST00000568796 LRRIQ1Q96JM4 1722 aa25.16■■□□□ 1.62
PKD1-236ENST00000568796 KDM5CP41229 1560 aa25.14■■□□□ 1.62
PKD1-236ENST00000568796 CERKQ8TCT0 537 aa25.13■■□□□ 1.61
PKD1-236ENST00000568796 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
PKD1-236ENST00000568796 CCDC18Q5T9S5 1454 aa25.11■■□□□ 1.61
PKD1-236ENST00000568796 ESF1Q9H501 851 aaKnown RBP25.11■■□□□ 1.61
PKD1-236ENST00000568796 CDC42BPBQ9Y5S2 1711 aa25.1■■□□□ 1.61
PKD1-236ENST00000568796 DIP2CQ9Y2E4 1556 aa25.1■■□□□ 1.61
PKD1-236ENST00000568796 PREX1Q8TCU6 1659 aa25.09■■□□□ 1.61
PKD1-236ENST00000568796 TRAPPC8Q9Y2L5 1435 aa25.09■■□□□ 1.61
PKD1-236ENST00000568796 MLH3Q9UHC1 1453 aa25.08■■□□□ 1.6
PKD1-236ENST00000568796 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
PKD1-236ENST00000568796 PREX2Q70Z35 1606 aa25.06■■□□□ 1.6
PKD1-236ENST00000568796 ZNF777Q9ULD5 760 aaPredicted RBP25.06■■□□□ 1.6
PKD1-236ENST00000568796 ABCA6Q8N139 1617 aa25.05■■□□□ 1.6
PKD1-236ENST00000568796 ABCC1P33527 1531 aa25.05■■□□□ 1.6
PKD1-236ENST00000568796 DMRT2Q9Y5R5 561 aa25.04■■□□□ 1.6
PKD1-236ENST00000568796 REREQ9P2R6 1566 aa25.02■■□□□ 1.6
PKD1-236ENST00000568796 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
PKD1-236ENST00000568796 ITSN2Q9NZM3 1697 aa25.01■■□□□ 1.59
PKD1-236ENST00000568796 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
PKD1-236ENST00000568796 AGLP35573 1532 aa24.97■■□□□ 1.59
PKD1-236ENST00000568796 CDC42BPAQ5VT25 1732 aa24.97■■□□□ 1.59
PKD1-236ENST00000568796 C3P01024 1663 aa24.95■■□□□ 1.58
PKD1-236ENST00000568796 HNRNPMP52272 730 aaKnown RBP eCLIP24.95■■□□□ 1.58
PKD1-236ENST00000568796 SPAG9O60271 1321 aaKnown RBP24.94■■□□□ 1.58
PKD1-236ENST00000568796 STRCQ7RTU9 1775 aa24.94■■□□□ 1.58
PKD1-236ENST00000568796 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
PKD1-236ENST00000568796 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
PKD1-236ENST00000568796 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
PKD1-236ENST00000568796 SAMD9LQ8IVG5 1584 aa24.91■■□□□ 1.58
PKD1-236ENST00000568796 SYCP2Q9BX26 1530 aa24.91■■□□□ 1.58
PKD1-236ENST00000568796 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
PKD1-236ENST00000568796 CCNB3Q8WWL7 1395 aa24.87■■□□□ 1.57
PKD1-236ENST00000568796 PTPRTO14522 1441 aa24.86■■□□□ 1.57
PKD1-236ENST00000568796 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
PKD1-236ENST00000568796 ZMYM3Q14202 1370 aa24.83■■□□□ 1.57
PKD1-236ENST00000568796 SUPT6HQ7KZ85 1726 aaKnown RBP24.82■■□□□ 1.56
PKD1-236ENST00000568796 PLEKHH2Q8IVE3 1493 aa24.82■■□□□ 1.56
PKD1-236ENST00000568796 KIAA1107Q9UPP5 1409 aa24.81■■□□□ 1.56
PKD1-236ENST00000568796 ATP7AQ04656 1500 aa24.81■■□□□ 1.56
PKD1-236ENST00000568796 GGT6Q6P531 493 aa24.8■■□□□ 1.56
PKD1-236ENST00000568796 NCOA1Q15788 1441 aa24.79■■□□□ 1.56
PKD1-236ENST00000568796 NPATQ14207 1427 aa24.78■■□□□ 1.56
PKD1-236ENST00000568796 A2MP01023 1474 aa24.78■■□□□ 1.56
PKD1-236ENST00000568796 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
PKD1-236ENST00000568796 ZNF644Q9H582 1327 aaPredicted RBP24.75■■□□□ 1.55
PKD1-236ENST00000568796 CAMSAP1Q5T5Y3 1602 aa24.75■■□□□ 1.55
PKD1-236ENST00000568796 CLTCQ00610 1675 aaKnown RBP24.73■■□□□ 1.55
PKD1-236ENST00000568796 INO80Q9ULG1 1556 aaPredicted RBP24.73■■□□□ 1.55
PKD1-236ENST00000568796 DISP3Q9P2K9 1392 aa24.73■■□□□ 1.55
PKD1-236ENST00000568796 NCKAP5LQ9HCH0 1330 aa24.73■■□□□ 1.55
PKD1-236ENST00000568796 PLXNC1O60486 1568 aa24.71■■□□□ 1.55
PKD1-236ENST00000568796 LTBP4Q8N2S1 1624 aa24.69■■□□□ 1.54
PKD1-236ENST00000568796 TIAM1Q13009 1591 aa24.67■■□□□ 1.54
PKD1-236ENST00000568796 EHBP1L1Q8N3D4 1523 aa24.67■■□□□ 1.54
PKD1-236ENST00000568796 PTPRKQ15262 1439 aa24.67■■□□□ 1.54
PKD1-236ENST00000568796 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
PKD1-236ENST00000568796 PKD2Q13563 968 aa24.65■■□□□ 1.54
PKD1-236ENST00000568796 ADGBQ8N7X0 1667 aa24.64■■□□□ 1.53
PKD1-236ENST00000568796 MYO3AQ8NEV4 1616 aa24.64■■□□□ 1.53
PKD1-236ENST00000568796 MBD5Q9P267 1494 aa24.64■■□□□ 1.53
PKD1-236ENST00000568796 ZNF335Q9H4Z2 1342 aaPredicted RBP24.63■■□□□ 1.53
PKD1-236ENST00000568796 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
PKD1-236ENST00000568796 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
PKD1-236ENST00000568796 CEP170BQ9Y4F5 1589 aaPredicted RBP24.62■■□□□ 1.53
PKD1-236ENST00000568796 DHX29Q7Z478 1369 aaKnown RBP24.6■■□□□ 1.53
PKD1-236ENST00000568796 KIF3BO15066 747 aa24.6■■□□□ 1.53
PKD1-236ENST00000568796 ILDR2Q71H61 639 aa24.6■■□□□ 1.53
PKD1-236ENST00000568796 RTEL1-TNFRSF6BF6WH68 1400 aa24.6■■□□□ 1.53
PKD1-236ENST00000568796 PLA2R1Q13018 1463 aa24.59■■□□□ 1.53
PKD1-236ENST00000568796 ZNF142P52746 1687 aaPredicted RBP24.59■■□□□ 1.53
PKD1-236ENST00000568796 UBAP1LF5GYI3 381 aa24.57■■□□□ 1.52
PKD1-236ENST00000568796 TCOF1Q13428 1488 aaKnown RBP24.55■■□□□ 1.52
PKD1-236ENST00000568796 NCOA2Q15596 1464 aa24.55■■□□□ 1.52
PKD1-236ENST00000568796 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
PKD1-236ENST00000568796 A2ML1A8K2U0 1454 aa24.53■■□□□ 1.52
PKD1-236ENST00000568796 RSPH4AQ5TD94 716 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms