RNA–Protein interactions for RNA: ENST00000568692.1

TSC2-224, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 636 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-224ENST00000568692 POGZQ7Z3K3 1410 aa16.45■□□□□ 0.22
TSC2-224ENST00000568692 EFCAB2Q5VUJ9 269 aa16.44■□□□□ 0.22
TSC2-224ENST00000568692 KIF14Q15058 1648 aa16.44■□□□□ 0.22
TSC2-224ENST00000568692 LRRIQ1Q96JM4 1722 aa16.43■□□□□ 0.22
TSC2-224ENST00000568692 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
TSC2-224ENST00000568692 CLIP1P30622 1438 aa16.41■□□□□ 0.22
TSC2-224ENST00000568692 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
TSC2-224ENST00000568692 SIGLEC1Q9BZZ2 1709 aa16.41■□□□□ 0.22
TSC2-224ENST00000568692 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
TSC2-224ENST00000568692 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
TSC2-224ENST00000568692 CCDC18Q5T9S5 1454 aa16.37■□□□□ 0.21
TSC2-224ENST00000568692 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
TSC2-224ENST00000568692 ATP10AO60312 1499 aa16.36■□□□□ 0.21
TSC2-224ENST00000568692 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
TSC2-224ENST00000568692 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
TSC2-224ENST00000568692 LMTK3Q96Q04 1460 aa16.35■□□□□ 0.21
TSC2-224ENST00000568692 KDM5CP41229 1560 aa16.34■□□□□ 0.21
TSC2-224ENST00000568692 C9orf84Q5VXU9 1444 aa16.34■□□□□ 0.21
TSC2-224ENST00000568692 MLECQ14165 292 aa16.33■□□□□ 0.2
TSC2-224ENST00000568692 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
TSC2-224ENST00000568692 CDC42BPBQ9Y5S2 1711 aa16.33■□□□□ 0.2
TSC2-224ENST00000568692 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
TSC2-224ENST00000568692 ARHGEF12Q9NZN5 1544 aa16.31■□□□□ 0.2
TSC2-224ENST00000568692 FER1L4A9Z1Z3 1794 aa16.29■□□□□ 0.2
TSC2-224ENST00000568692 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
TSC2-224ENST00000568692 ABCC1P33527 1531 aa16.29■□□□□ 0.2
TSC2-224ENST00000568692 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
TSC2-224ENST00000568692 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
TSC2-224ENST00000568692 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
TSC2-224ENST00000568692 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
TSC2-224ENST00000568692 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
TSC2-224ENST00000568692 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
TSC2-224ENST00000568692 HSPA2P54652 639 aa16.25■□□□□ 0.19
TSC2-224ENST00000568692 MYT1LQ9UL68 1186 aa16.25■□□□□ 0.19
TSC2-224ENST00000568692 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
TSC2-224ENST00000568692 ABCA6Q8N139 1617 aa16.24■□□□□ 0.19
TSC2-224ENST00000568692 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
TSC2-224ENST00000568692 AGLP35573 1532 aa16.21■□□□□ 0.19
TSC2-224ENST00000568692 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
TSC2-224ENST00000568692 SAMD9LQ8IVG5 1584 aa16.2■□□□□ 0.18
TSC2-224ENST00000568692 KIDINS220Q9ULH0 1771 aa16.2■□□□□ 0.18
TSC2-224ENST00000568692 ILDR2Q71H61 639 aa16.19■□□□□ 0.18
TSC2-224ENST00000568692 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
TSC2-224ENST00000568692 SYCP2Q9BX26 1530 aa16.17■□□□□ 0.18
TSC2-224ENST00000568692 KIAA1107Q9UPP5 1409 aa16.17■□□□□ 0.18
TSC2-224ENST00000568692 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
TSC2-224ENST00000568692 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
TSC2-224ENST00000568692 PREX1Q8TCU6 1659 aa16.16■□□□□ 0.18
TSC2-224ENST00000568692 HNRNPMP52272 730 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSC2-224ENST00000568692 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
TSC2-224ENST00000568692 SPAG9O60271 1321 aaKnown RBP16.15■□□□□ 0.18
TSC2-224ENST00000568692 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
TSC2-224ENST00000568692 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
TSC2-224ENST00000568692 SETD1BQ9UPS6 1966 aaKnown RBP16.13■□□□□ 0.17
TSC2-224ENST00000568692 C3P01024 1663 aa16.11■□□□□ 0.17
TSC2-224ENST00000568692 UHRF1BP1Q6BDS2 1440 aa16.11■□□□□ 0.17
TSC2-224ENST00000568692 EHBP1L1Q8N3D4 1523 aa16.11■□□□□ 0.17
TSC2-224ENST00000568692 ESF1Q9H501 851 aaKnown RBP16.11■□□□□ 0.17
TSC2-224ENST00000568692 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
TSC2-224ENST00000568692 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
TSC2-224ENST00000568692 TIAM1Q13009 1591 aa16.1■□□□□ 0.17
TSC2-224ENST00000568692 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
TSC2-224ENST00000568692 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
TSC2-224ENST00000568692 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
TSC2-224ENST00000568692 A2MP01023 1474 aa16.07■□□□□ 0.16
TSC2-224ENST00000568692 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
TSC2-224ENST00000568692 STRCQ7RTU9 1775 aa16.07■□□□□ 0.16
TSC2-224ENST00000568692 SUPT6HQ7KZ85 1726 aaKnown RBP16.05■□□□□ 0.16
TSC2-224ENST00000568692 CERKQ8TCT0 537 aa16.05■□□□□ 0.16
TSC2-224ENST00000568692 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
TSC2-224ENST00000568692 ZMYM3Q14202 1370 aa16.04■□□□□ 0.16
TSC2-224ENST00000568692 MROH2AA6NES4 1674 aa16.04■□□□□ 0.16
TSC2-224ENST00000568692 NPATQ14207 1427 aa16.03■□□□□ 0.16
TSC2-224ENST00000568692 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.16
TSC2-224ENST00000568692 NCOA2Q15596 1464 aa16.02■□□□□ 0.15
TSC2-224ENST00000568692 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
TSC2-224ENST00000568692 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
TSC2-224ENST00000568692 GGT6Q6P531 493 aa16■□□□□ 0.15
TSC2-224ENST00000568692 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
TSC2-224ENST00000568692 PTPRTO14522 1441 aa16■□□□□ 0.15
TSC2-224ENST00000568692 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
TSC2-224ENST00000568692 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
TSC2-224ENST00000568692 NCOA1Q15788 1441 aa15.98■□□□□ 0.15
TSC2-224ENST00000568692 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
TSC2-224ENST00000568692 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
TSC2-224ENST00000568692 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
TSC2-224ENST00000568692 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
TSC2-224ENST00000568692 PTPRKQ15262 1439 aa15.96■□□□□ 0.15
TSC2-224ENST00000568692 SOCS7O14512 581 aa15.96■□□□□ 0.15
TSC2-224ENST00000568692 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
TSC2-224ENST00000568692 DISP3Q9P2K9 1392 aa15.94■□□□□ 0.14
TSC2-224ENST00000568692 CAMSAP1Q5T5Y3 1602 aa15.94■□□□□ 0.14
TSC2-224ENST00000568692 SPATA31D1Q6ZQQ2 1576 aa15.93■□□□□ 0.14
TSC2-224ENST00000568692 MYO3AQ8NEV4 1616 aa15.92■□□□□ 0.14
TSC2-224ENST00000568692 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
TSC2-224ENST00000568692 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
TSC2-224ENST00000568692 KIF3BO15066 747 aa15.91■□□□□ 0.14
TSC2-224ENST00000568692 ZNF142P52746 1687 aaPredicted RBP15.91■□□□□ 0.14
TSC2-224ENST00000568692 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
TSC2-224ENST00000568692 CEP170BQ9Y4F5 1589 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms