RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
PKD1-235ENST00000568591 FAM9BQ8IZU0 186 aa25.39■■□□□ 1.65
PKD1-235ENST00000568591 CCDC7Q96M83 1385 aa25.38■■□□□ 1.65
PKD1-235ENST00000568591 ANKRD30BQ9BXX2 1392 aa25.37■■□□□ 1.65
PKD1-235ENST00000568591 DAPK1P53355 1430 aa25.37■■□□□ 1.65
PKD1-235ENST00000568591 PRKRIP1Q9H875 184 aaPredicted RBP25.37■■□□□ 1.65
PKD1-235ENST00000568591 NCOA1Q15788 1441 aa25.36■■□□□ 1.65
PKD1-235ENST00000568591 ABCC5O15440 1437 aa25.36■■□□□ 1.65
PKD1-235ENST00000568591 SLC4A1APQ9BWU0 796 aaKnown RBP25.33■■□□□ 1.65
PKD1-235ENST00000568591 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
PKD1-235ENST00000568591 RPRD2Q5VT52 1461 aaKnown RBP25.32■■□□□ 1.64
PKD1-235ENST00000568591 TEX14Q8IWB6 1497 aa25.32■■□□□ 1.64
PKD1-235ENST00000568591 CNGB1Q14028 1251 aaPredicted RBP25.32■■□□□ 1.64
PKD1-235ENST00000568591 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
PKD1-235ENST00000568591 MSH5O43196 834 aa25.3■■□□□ 1.64
PKD1-235ENST00000568591 KIF7Q2M1P5 1343 aa25.3■■□□□ 1.64
PKD1-235ENST00000568591 NUP153P49790 1475 aaKnown RBP25.28■■□□□ 1.64
PKD1-235ENST00000568591 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
PKD1-235ENST00000568591 ROCK1Q13464 1354 aa25.27■■□□□ 1.64
PKD1-235ENST00000568591 SPATA31E1Q6ZUB1 1445 aa25.25■■□□□ 1.63
PKD1-235ENST00000568591 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
PKD1-235ENST00000568591 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
PKD1-235ENST00000568591 KIAA0556O60303 1618 aa25.22■■□□□ 1.63
PKD1-235ENST00000568591 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
PKD1-235ENST00000568591 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
PKD1-235ENST00000568591 SENP3-EIF4A1A0A087X0R7 540 aa25.2■■□□□ 1.62
PKD1-235ENST00000568591 ZNF777Q9ULD5 760 aaPredicted RBP25.2■■□□□ 1.62
PKD1-235ENST00000568591 POLR3GLQ9BT43 218 aa25.19■■□□□ 1.62
PKD1-235ENST00000568591 CDK11AQ9UQ88 783 aaPredicted RBP25.19■■□□□ 1.62
PKD1-235ENST00000568591 PZPP20742 1482 aa25.19■■□□□ 1.62
PKD1-235ENST00000568591 B4GALNT3Q6L9W6 998 aa25.17■■□□□ 1.62
PKD1-235ENST00000568591 KIAA0586Q9BVV6 1533 aa25.17■■□□□ 1.62
PKD1-235ENST00000568591 CFDP1Q9UEE9 299 aaPredicted RBP25.16■■□□□ 1.62
PKD1-235ENST00000568591 ZBED9Q6R2W3 1325 aa25.15■■□□□ 1.62
PKD1-235ENST00000568591 RAPGEF6Q8TEU7 1601 aa25.14■■□□□ 1.62
PKD1-235ENST00000568591 PPP4R2Q9NY27 417 aa25.13■■□□□ 1.61
PKD1-235ENST00000568591 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
PKD1-235ENST00000568591 PLB1Q6P1J6 1458 aa25.12■■□□□ 1.61
PKD1-235ENST00000568591 PKD2Q13563 968 aa25.09■■□□□ 1.61
PKD1-235ENST00000568591 DHX29Q7Z478 1369 aaKnown RBP25.08■■□□□ 1.61
PKD1-235ENST00000568591 GRIN2AQ12879 1464 aa25.08■■□□□ 1.61
PKD1-235ENST00000568591 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
PKD1-235ENST00000568591 TROQ12816 1431 aaPredicted RBP25.07■■□□□ 1.6
PKD1-235ENST00000568591 USP47Q96K76 1375 aa25.07■■□□□ 1.6
PKD1-235ENST00000568591 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
PKD1-235ENST00000568591 KIF14Q15058 1648 aa25.07■■□□□ 1.6
PKD1-235ENST00000568591 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
PKD1-235ENST00000568591 MBD5Q9P267 1494 aa25.05■■□□□ 1.6
PKD1-235ENST00000568591 FANCIQ9NVI1 1328 aa25.04■■□□□ 1.6
PKD1-235ENST00000568591 PRKCSHP14314 528 aaPredicted RBP25.03■■□□□ 1.6
PKD1-235ENST00000568591 FBLN2P98095 1184 aa25.03■■□□□ 1.6
PKD1-235ENST00000568591 ERICH6BQ5W0A0 696 aa25.03■■□□□ 1.6
PKD1-235ENST00000568591 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
PKD1-235ENST00000568591 POLR1AO95602 1720 aaPredicted RBP25.02■■□□□ 1.6
PKD1-235ENST00000568591 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
PKD1-235ENST00000568591 CHMP7Q8WUX9 453 aaPredicted RBP24.97■■□□□ 1.59
PKD1-235ENST00000568591 ANKRD50Q9ULJ7 1429 aa24.95■■□□□ 1.59
PKD1-235ENST00000568591 CEP170Q5SW79 1584 aa24.95■■□□□ 1.58
PKD1-235ENST00000568591 KDM2AQ9Y2K7 1162 aa24.94■■□□□ 1.58
PKD1-235ENST00000568591 ADGBQ8N7X0 1667 aa24.94■■□□□ 1.58
PKD1-235ENST00000568591 ADGRL2O95490 1459 aa24.94■■□□□ 1.58
PKD1-235ENST00000568591 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
PKD1-235ENST00000568591 NUP155O75694 1391 aa24.92■■□□□ 1.58
PKD1-235ENST00000568591 KDM5CP41229 1560 aa24.92■■□□□ 1.58
PKD1-235ENST00000568591 ITSN2Q9NZM3 1697 aa24.91■■□□□ 1.58
PKD1-235ENST00000568591 BCL11AQ9H165 835 aa24.9■■□□□ 1.58
PKD1-235ENST00000568591 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
PKD1-235ENST00000568591 CARD11Q9BXL7 1154 aa24.9■■□□□ 1.58
PKD1-235ENST00000568591 SMG6Q86US8 1419 aaKnown RBP24.9■■□□□ 1.58
PKD1-235ENST00000568591 JPH4Q96JJ6 628 aa24.88■■□□□ 1.57
PKD1-235ENST00000568591 NUDCQ9Y266 331 aa24.88■■□□□ 1.57
PKD1-235ENST00000568591 PNISRQ8TF01 805 aaKnown RBP24.87■■□□□ 1.57
PKD1-235ENST00000568591 ST20-MTHFSA0A0A6YYL1 179 aa24.86■■□□□ 1.57
PKD1-235ENST00000568591 ERICH6Q7L0X2 663 aa24.86■■□□□ 1.57
PKD1-235ENST00000568591 ADCY10Q96PN6 1610 aa24.85■■□□□ 1.57
PKD1-235ENST00000568591 C9orf84Q5VXU9 1444 aa24.84■■□□□ 1.57
PKD1-235ENST00000568591 HNRNPMP52272 730 aaKnown RBP eCLIP24.84■■□□□ 1.57
PKD1-235ENST00000568591 TMC1Q8TDI8 760 aa24.83■■□□□ 1.57
PKD1-235ENST00000568591 DCAF11Q8TEB1 546 aa24.83■■□□□ 1.57
PKD1-235ENST00000568591 PLEKHD1A6NEE1 506 aa24.82■■□□□ 1.56
PKD1-235ENST00000568591 RALGAPBQ86X10 1494 aa24.82■■□□□ 1.56
PKD1-235ENST00000568591 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
PKD1-235ENST00000568591 UHRF1BP1Q6BDS2 1440 aa24.81■■□□□ 1.56
PKD1-235ENST00000568591 CDC42BPAQ5VT25 1732 aa24.8■■□□□ 1.56
PKD1-235ENST00000568591 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
PKD1-235ENST00000568591 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
PKD1-235ENST00000568591 ABCC10Q5T3U5 1492 aa24.79■■□□□ 1.56
PKD1-235ENST00000568591 RNF123Q5XPI4 1314 aa24.79■■□□□ 1.56
PKD1-235ENST00000568591 ATP10BO94823 1461 aa24.78■■□□□ 1.56
PKD1-235ENST00000568591 CARMIL2Q6F5E8 1435 aa24.78■■□□□ 1.56
PKD1-235ENST00000568591 ARID4BQ4LE39 1312 aaPredicted RBP24.77■■□□□ 1.56
PKD1-235ENST00000568591 CCDC136Q96JN2 1154 aa24.76■■□□□ 1.55
PKD1-235ENST00000568591 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
PKD1-235ENST00000568591 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
PKD1-235ENST00000568591 KIF15Q9NS87 1388 aa24.76■■□□□ 1.55
PKD1-235ENST00000568591 SALL2Q9Y467 1007 aaPredicted RBP24.75■■□□□ 1.55
PKD1-235ENST00000568591 NUP160Q12769 1436 aa24.73■■□□□ 1.55
PKD1-235ENST00000568591 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
PKD1-235ENST00000568591 ABCA8O94911 1581 aa24.71■■□□□ 1.55
PKD1-235ENST00000568591 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms