RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 BCORL1Q5H9F3 1711 aa30.81■■■□□ 2.52
SPSB3-210ENST00000568416 ARID4BQ4LE39 1312 aaPredicted RBP30.81■■■□□ 2.52
SPSB3-210ENST00000568416 CCDC18Q5T9S5 1454 aa30.81■■■□□ 2.52
SPSB3-210ENST00000568416 MAGI2Q86UL8 1455 aa30.81■■■□□ 2.52
SPSB3-210ENST00000568416 PTPRMP28827 1452 aa30.8■■■□□ 2.52
SPSB3-210ENST00000568416 YEATS2Q9ULM3 1422 aa30.8■■■□□ 2.52
SPSB3-210ENST00000568416 ZFYVE16Q7Z3T8 1539 aa30.79■■■□□ 2.52
SPSB3-210ENST00000568416 FYCO1Q9BQS8 1478 aa30.76■■■□□ 2.51
SPSB3-210ENST00000568416 ARHGAP5Q13017 1502 aa30.73■■■□□ 2.51
SPSB3-210ENST00000568416 MADDQ8WXG6 1647 aa30.73■■■□□ 2.51
SPSB3-210ENST00000568416 SIGLEC1Q9BZZ2 1709 aa30.67■■■□□ 2.5
SPSB3-210ENST00000568416 ZNF518AQ6AHZ1 1483 aa30.66■■■□□ 2.5
SPSB3-210ENST00000568416 CDC42BPBQ9Y5S2 1711 aa30.64■■■□□ 2.5
SPSB3-210ENST00000568416 ATP10AO60312 1499 aa30.63■■■□□ 2.49
SPSB3-210ENST00000568416 PREX2Q70Z35 1606 aa30.63■■■□□ 2.49
SPSB3-210ENST00000568416 KDM5CP41229 1560 aa30.62■■■□□ 2.49
SPSB3-210ENST00000568416 AFAP1Q8N556 730 aa30.62■■■□□ 2.49
SPSB3-210ENST00000568416 C9orf84Q5VXU9 1444 aa30.6■■■□□ 2.49
SPSB3-210ENST00000568416 RIMS1Q86UR5 1692 aaKnown RBP30.6■■■□□ 2.49
SPSB3-210ENST00000568416 ABCC1P33527 1531 aa30.57■■■□□ 2.48
SPSB3-210ENST00000568416 ARHGEF12Q9NZN5 1544 aa30.55■■■□□ 2.48
SPSB3-210ENST00000568416 MLECQ14165 292 aa30.54■■■□□ 2.48
SPSB3-210ENST00000568416 TRAPPC8Q9Y2L5 1435 aa30.53■■■□□ 2.48
SPSB3-210ENST00000568416 CDC42BPAQ5VT25 1732 aa30.52■■■□□ 2.48
SPSB3-210ENST00000568416 MLH3Q9UHC1 1453 aa30.51■■■□□ 2.48
SPSB3-210ENST00000568416 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
SPSB3-210ENST00000568416 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
SPSB3-210ENST00000568416 ITSN2Q9NZM3 1697 aa30.49■■■□□ 2.47
SPSB3-210ENST00000568416 GPATCH8Q9UKJ3 1502 aaKnown RBP30.48■■■□□ 2.47
SPSB3-210ENST00000568416 LMTK3Q96Q04 1460 aa30.48■■■□□ 2.47
SPSB3-210ENST00000568416 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
SPSB3-210ENST00000568416 REREQ9P2R6 1566 aa30.45■■■□□ 2.47
SPSB3-210ENST00000568416 ABCA6Q8N139 1617 aa30.44■■■□□ 2.46
SPSB3-210ENST00000568416 FER1L4A9Z1Z3 1794 aa30.44■■■□□ 2.46
SPSB3-210ENST00000568416 SAMD9LQ8IVG5 1584 aa30.43■■■□□ 2.46
SPSB3-210ENST00000568416 MTUS2Q5JR59 1369 aa30.42■■■□□ 2.46
SPSB3-210ENST00000568416 PLPPR3Q6T4P5 718 aa30.41■■■□□ 2.46
SPSB3-210ENST00000568416 ZNF777Q9ULD5 760 aaPredicted RBP30.41■■■□□ 2.46
SPSB3-210ENST00000568416 ILDR1Q86SU0 546 aaPredicted RBP30.39■■■□□ 2.46
SPSB3-210ENST00000568416 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
SPSB3-210ENST00000568416 AGLP35573 1532 aa30.37■■■□□ 2.45
SPSB3-210ENST00000568416 SYCP2Q9BX26 1530 aa30.37■■■□□ 2.45
SPSB3-210ENST00000568416 CFDP1Q9UEE9 299 aaPredicted RBP30.36■■■□□ 2.45
SPSB3-210ENST00000568416 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
SPSB3-210ENST00000568416 EHBP1L1Q8N3D4 1523 aa30.34■■■□□ 2.45
SPSB3-210ENST00000568416 KIAA1107Q9UPP5 1409 aa30.34■■■□□ 2.45
SPSB3-210ENST00000568416 HNRNPMP52272 730 aaKnown RBP eCLIP30.33■■■□□ 2.45
SPSB3-210ENST00000568416 PLEKHH2Q8IVE3 1493 aa30.32■■■□□ 2.44
SPSB3-210ENST00000568416 TIAM1Q13009 1591 aa30.29■■■□□ 2.44
SPSB3-210ENST00000568416 CEBPAP49715 358 aaPredicted RBP30.29■■■□□ 2.44
SPSB3-210ENST00000568416 HSPA2P54652 639 aa30.29■■■□□ 2.44
SPSB3-210ENST00000568416 SPAG9O60271 1321 aaKnown RBP30.28■■■□□ 2.44
SPSB3-210ENST00000568416 LOC105371045A0A1W2PR82 267 aa30.26■■■□□ 2.43
SPSB3-210ENST00000568416 ATP7AQ04656 1500 aa30.22■■■□□ 2.43
SPSB3-210ENST00000568416 ZNF644Q9H582 1327 aaPredicted RBP30.22■■■□□ 2.43
SPSB3-210ENST00000568416 INO80Q9ULG1 1556 aaPredicted RBP30.21■■■□□ 2.43
SPSB3-210ENST00000568416 PREX1Q8TCU6 1659 aa30.18■■■□□ 2.42
SPSB3-210ENST00000568416 VPS8Q8N3P4 1428 aa30.18■■■□□ 2.42
SPSB3-210ENST00000568416 MBD5Q9P267 1494 aa30.18■■■□□ 2.42
SPSB3-210ENST00000568416 NCOA2Q15596 1464 aa30.17■■■□□ 2.42
SPSB3-210ENST00000568416 ESF1Q9H501 851 aaKnown RBP30.16■■■□□ 2.42
SPSB3-210ENST00000568416 CNTLNQ9NXG0 1405 aa30.14■■■□□ 2.42
SPSB3-210ENST00000568416 A2MP01023 1474 aa30.14■■■□□ 2.42
SPSB3-210ENST00000568416 PLXNC1O60486 1568 aa30.14■■■□□ 2.42
SPSB3-210ENST00000568416 C3P01024 1663 aa30.14■■■□□ 2.41
SPSB3-210ENST00000568416 SUPT6HQ7KZ85 1726 aaKnown RBP30.13■■■□□ 2.41
SPSB3-210ENST00000568416 UHRF1BP1Q6BDS2 1440 aa30.12■■■□□ 2.41
SPSB3-210ENST00000568416 RTEL1-TNFRSF6BF6WH68 1400 aa30.08■■■□□ 2.41
SPSB3-210ENST00000568416 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
SPSB3-210ENST00000568416 CAMSAP2Q08AD1 1489 aa30.06■■■□□ 2.4
SPSB3-210ENST00000568416 FBXO41Q8TF61 875 aa30.05■■■□□ 2.4
SPSB3-210ENST00000568416 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
SPSB3-210ENST00000568416 ADGBQ8N7X0 1667 aa30.03■■■□□ 2.4
SPSB3-210ENST00000568416 CCDC141Q6ZP82 1450 aa30.02■■■□□ 2.4
SPSB3-210ENST00000568416 ZMYM3Q14202 1370 aa30.02■■■□□ 2.4
SPSB3-210ENST00000568416 MAP3K1Q13233 1512 aa30.01■■■□□ 2.4
SPSB3-210ENST00000568416 RSPH4AQ5TD94 716 aa30■■■□□ 2.39
SPSB3-210ENST00000568416 SETD1BQ9UPS6 1966 aaKnown RBP30■■■□□ 2.39
SPSB3-210ENST00000568416 NPATQ14207 1427 aa29.98■■■□□ 2.39
SPSB3-210ENST00000568416 GGT6Q6P531 493 aa29.98■■■□□ 2.39
SPSB3-210ENST00000568416 DHX29Q7Z478 1369 aaKnown RBP29.98■■■□□ 2.39
SPSB3-210ENST00000568416 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
SPSB3-210ENST00000568416 PPP6R1Q9UPN7 881 aa29.95■■■□□ 2.39
SPSB3-210ENST00000568416 STRCQ7RTU9 1775 aa29.95■■■□□ 2.38
SPSB3-210ENST00000568416 CLTCQ00610 1675 aaKnown RBP29.95■■■□□ 2.38
SPSB3-210ENST00000568416 ARHGEF5Q12774 1597 aa29.94■■■□□ 2.38
SPSB3-210ENST00000568416 DMRT2Q9Y5R5 561 aa29.92■■■□□ 2.38
SPSB3-210ENST00000568416 PTPRKQ15262 1439 aa29.88■■■□□ 2.37
SPSB3-210ENST00000568416 CERKQ8TCT0 537 aa29.86■■■□□ 2.37
SPSB3-210ENST00000568416 MYOM3Q5VTT5 1437 aa29.86■■■□□ 2.37
SPSB3-210ENST00000568416 TSPY4P0CV99 314 aa29.85■■■□□ 2.37
SPSB3-210ENST00000568416 TSPY10P0CW01 314 aa29.85■■■□□ 2.37
SPSB3-210ENST00000568416 PTPRTO14522 1441 aa29.85■■■□□ 2.37
SPSB3-210ENST00000568416 MIA2Q96PC5 1412 aa29.85■■■□□ 2.37
SPSB3-210ENST00000568416 KIF3BO15066 747 aa29.84■■■□□ 2.37
SPSB3-210ENST00000568416 NCOA1Q15788 1441 aa29.84■■■□□ 2.37
SPSB3-210ENST00000568416 MAST1Q9Y2H9 1570 aa29.8■■■□□ 2.36
SPSB3-210ENST00000568416 MYO3AQ8NEV4 1616 aa29.79■■■□□ 2.36
SPSB3-210ENST00000568416 FAM135AQ9P2D6 1515 aa29.79■■■□□ 2.36
SPSB3-210ENST00000568416 CAMSAP1Q5T5Y3 1602 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms