RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 NISCHQ9Y2I1 1504 aa47.16■■■■■ 5.14
SPSB3-210ENST00000568416 CCDC180Q9P1Z9 1646 aa42.18■■■■■ 4.34
SPSB3-210ENST00000568416 ABCC9O60706 1549 aa41.95■■■■■ 4.31
SPSB3-210ENST00000568416 RB1CC1Q8TDY2 1594 aa40.04■■■■■ 4
SPSB3-210ENST00000568416 NACADO15069 1562 aa39.84■■■■□ 3.97
SPSB3-210ENST00000568416 DCAF8L2P0C7V8 631 aa39.63■■■■□ 3.93
SPSB3-210ENST00000568416 MYO15BQ96JP2 1530 aa39.42■■■■□ 3.9
SPSB3-210ENST00000568416 DNAJC5BQ9UF47 199 aa39.18■■■■□ 3.86
SPSB3-210ENST00000568416 ZCCHC6Q5VYS8 1495 aaKnown RBP39.15■■■■□ 3.86
SPSB3-210ENST00000568416 PABPN1Q86U42 306 aaKnown RBP eCLIP39.1■■■■□ 3.85
SPSB3-210ENST00000568416 UNC13AQ9UPW8 1703 aa39.07■■■■□ 3.85
SPSB3-210ENST00000568416 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
SPSB3-210ENST00000568416 BICRAQ9NZM4 1560 aa38.9■■■■□ 3.82
SPSB3-210ENST00000568416 SCRIBQ14160 1630 aa38.44■■■■□ 3.74
SPSB3-210ENST00000568416 SHROOM4Q9ULL8 1493 aa38.42■■■■□ 3.74
SPSB3-210ENST00000568416 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
SPSB3-210ENST00000568416 CC2D2AQ9P2K1 1620 aa37.9■■■■□ 3.66
SPSB3-210ENST00000568416 CECR2Q9BXF3 1484 aa37.77■■■■□ 3.64
SPSB3-210ENST00000568416 NCAPD3P42695 1498 aa36.82■■■■□ 3.48
SPSB3-210ENST00000568416 ATAD2BQ9ULI0 1458 aa36.72■■■■□ 3.47
SPSB3-210ENST00000568416 SMARCA4P51532 1647 aa36.71■■■■□ 3.47
SPSB3-210ENST00000568416 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
SPSB3-210ENST00000568416 BAZ1AQ9NRL2 1556 aaPredicted RBP36.58■■■■□ 3.45
SPSB3-210ENST00000568416 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
SPSB3-210ENST00000568416 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
SPSB3-210ENST00000568416 BAZ1BQ9UIG0 1483 aaKnown RBP36.36■■■■□ 3.41
SPSB3-210ENST00000568416 MROH2BQ7Z745 1585 aa36.34■■■■□ 3.41
SPSB3-210ENST00000568416 ERCC6Q03468 1493 aa36.19■■■■□ 3.38
SPSB3-210ENST00000568416 NESP48681 1621 aa36.12■■■■□ 3.37
SPSB3-210ENST00000568416 CUX2O14529 1486 aa36.09■■■■□ 3.37
SPSB3-210ENST00000568416 LAMC3Q9Y6N6 1575 aa35.91■■■■□ 3.34
SPSB3-210ENST00000568416 WIZO95785 1651 aa35.88■■■■□ 3.33
SPSB3-210ENST00000568416 DNAJC5Q9H3Z4 198 aa35.79■■■■□ 3.32
SPSB3-210ENST00000568416 THOC2Q8NI27 1593 aaKnown RBP35.71■■■■□ 3.31
SPSB3-210ENST00000568416 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
SPSB3-210ENST00000568416 RSF1Q96T23 1441 aaPredicted RBP35.69■■■■□ 3.3
SPSB3-210ENST00000568416 CADPSQ9ULU8 1353 aa35.69■■■■□ 3.3
SPSB3-210ENST00000568416 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
SPSB3-210ENST00000568416 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
SPSB3-210ENST00000568416 MRC2Q9UBG0 1479 aa35.38■■■■□ 3.25
SPSB3-210ENST00000568416 CFTRP13569 1480 aa35.35■■■■□ 3.25
SPSB3-210ENST00000568416 WDR62O43379 1518 aa35.29■■■■□ 3.24
SPSB3-210ENST00000568416 CEP164Q9UPV0 1460 aa35.28■■■■□ 3.24
SPSB3-210ENST00000568416 FANCD2Q9BXW9 1451 aa35.27■■■■□ 3.24
SPSB3-210ENST00000568416 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
SPSB3-210ENST00000568416 URB2Q14146 1524 aaKnown RBP34.97■■■■□ 3.19
SPSB3-210ENST00000568416 PRDM2Q13029 1718 aa34.9■■■■□ 3.18
SPSB3-210ENST00000568416 TOPBP1Q92547 1522 aa34.63■■■■□ 3.13
SPSB3-210ENST00000568416 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
SPSB3-210ENST00000568416 ABCC8Q09428 1581 aa34.57■■■■□ 3.13
SPSB3-210ENST00000568416 DNMBPQ6XZF7 1577 aa34.52■■■■□ 3.12
SPSB3-210ENST00000568416 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
SPSB3-210ENST00000568416 OSCARQ8IYS5 282 aa34.46■■■■□ 3.11
SPSB3-210ENST00000568416 POLA1P09884 1462 aaPredicted RBP34.3■■■■□ 3.08
SPSB3-210ENST00000568416 EIF4G3O43432 1585 aaKnown RBP34.3■■■■□ 3.08
SPSB3-210ENST00000568416 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
SPSB3-210ENST00000568416 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
SPSB3-210ENST00000568416 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
SPSB3-210ENST00000568416 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.071e-7■■■□□ 17.9
SPSB3-210ENST00000568416 RAD54L2Q9Y4B4 1467 aa34.16■■■■□ 3.06
SPSB3-210ENST00000568416 SOGA1O94964 1423 aa34.14■■■■□ 3.06
SPSB3-210ENST00000568416 CUX1P39880 1505 aa34.13■■■■□ 3.05
SPSB3-210ENST00000568416 FGD5Q6ZNL6 1462 aa34.11■■■■□ 3.05
SPSB3-210ENST00000568416 TDRD9Q8NDG6 1382 aaKnown RBP34.04■■■■□ 3.04
SPSB3-210ENST00000568416 WDR97A6NE52 1622 aa33.98■■■■□ 3.03
SPSB3-210ENST00000568416 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
SPSB3-210ENST00000568416 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
SPSB3-210ENST00000568416 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
SPSB3-210ENST00000568416 CHD1O14646 1710 aa33.95■■■■□ 3.03
SPSB3-210ENST00000568416 ARHGEF11O15085 1522 aa33.91■■■■□ 3.02
SPSB3-210ENST00000568416 FBLN2P98095 1184 aa33.89■■■■□ 3.02
SPSB3-210ENST00000568416 SNAPC4Q5SXM2 1469 aa33.87■■■■□ 3.01
SPSB3-210ENST00000568416 GRIN2BQ13224 1484 aa33.82■■■■□ 3.01
SPSB3-210ENST00000568416 MAGI1Q96QZ7 1491 aaPredicted RBP33.8■■■■□ 3
SPSB3-210ENST00000568416 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
SPSB3-210ENST00000568416 GAPVD1Q14C86 1478 aa33.73■■■□□ 2.99
SPSB3-210ENST00000568416 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
SPSB3-210ENST00000568416 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
SPSB3-210ENST00000568416 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
SPSB3-210ENST00000568416 CLASP1Q7Z460 1538 aa33.65■■■□□ 2.98
SPSB3-210ENST00000568416 WRNQ14191 1432 aaPredicted RBP eCLIP33.65■■■□□ 2.98
SPSB3-210ENST00000568416 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
SPSB3-210ENST00000568416 TOP2BQ02880 1626 aa33.63■■■□□ 2.97
SPSB3-210ENST00000568416 BIVM-ERCC5R4GMW8 1640 aa33.63■■■□□ 2.97
SPSB3-210ENST00000568416 CYB5RLQ6IPT4 315 aa33.62■■■□□ 2.97
SPSB3-210ENST00000568416 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
SPSB3-210ENST00000568416 ARAP1Q96P48 1450 aa33.61■■■□□ 2.97
SPSB3-210ENST00000568416 ADAMTS12P58397 1594 aa33.39■■■□□ 2.94
SPSB3-210ENST00000568416 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
SPSB3-210ENST00000568416 FHAD1B1AJZ9 1412 aa33.33■■■□□ 2.93
SPSB3-210ENST00000568416 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
SPSB3-210ENST00000568416 NUP160Q12769 1436 aa33.28■■■□□ 2.92
SPSB3-210ENST00000568416 CEP170Q5SW79 1584 aa33.25■■■□□ 2.91
SPSB3-210ENST00000568416 TRHP20396 242 aaPredicted RBP33.15■■■□□ 2.9
SPSB3-210ENST00000568416 ERCC6L2Q5T890 1561 aa33.12■■■□□ 2.89
SPSB3-210ENST00000568416 SHROOM2Q13796 1616 aa33.09■■■□□ 2.89
SPSB3-210ENST00000568416 KIF27Q86VH2 1401 aa32.99■■■□□ 2.87
SPSB3-210ENST00000568416 IGF1RP08069 1367 aa32.97■■■□□ 2.87
SPSB3-210ENST00000568416 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
SPSB3-210ENST00000568416 PRG4Q92954 1404 aaPredicted RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms