RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
VPS9D1-206ENST00000567379 CDC42BPAQ5VT25 1732 aa16.09■□□□□ 0.17
VPS9D1-206ENST00000567379 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
VPS9D1-206ENST00000567379 PTPRKQ15262 1439 aa16.08■□□□□ 0.16
VPS9D1-206ENST00000567379 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
VPS9D1-206ENST00000567379 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
VPS9D1-206ENST00000567379 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
VPS9D1-206ENST00000567379 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
VPS9D1-206ENST00000567379 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
VPS9D1-206ENST00000567379 HFM1A2PYH4 1435 aa16.05■□□□□ 0.16
VPS9D1-206ENST00000567379 DAPK1P53355 1430 aa16.04■□□□□ 0.16
VPS9D1-206ENST00000567379 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
VPS9D1-206ENST00000567379 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
VPS9D1-206ENST00000567379 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
VPS9D1-206ENST00000567379 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
VPS9D1-206ENST00000567379 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
VPS9D1-206ENST00000567379 PREX2Q70Z35 1606 aa16.02■□□□□ 0.16
VPS9D1-206ENST00000567379 ADGRL1O94910 1474 aa16.02■□□□□ 0.15
VPS9D1-206ENST00000567379 ABCC5O15440 1437 aa16.02■□□□□ 0.15
VPS9D1-206ENST00000567379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.01■□□□□ 0.15
VPS9D1-206ENST00000567379 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
VPS9D1-206ENST00000567379 CHIC2Q9UKJ5 165 aa16.01■□□□□ 0.15
VPS9D1-206ENST00000567379 GCC2Q8IWJ2 1684 aa16.01■□□□□ 0.15
VPS9D1-206ENST00000567379 NAIPQ13075 1403 aa16.01■□□□□ 0.15
VPS9D1-206ENST00000567379 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
VPS9D1-206ENST00000567379 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
VPS9D1-206ENST00000567379 ROCK1Q13464 1354 aa16■□□□□ 0.15
VPS9D1-206ENST00000567379 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
VPS9D1-206ENST00000567379 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
VPS9D1-206ENST00000567379 RRP7BPQ9NSQ0 103 aa15.98■□□□□ 0.15
VPS9D1-206ENST00000567379 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
VPS9D1-206ENST00000567379 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-206ENST00000567379 CROCC2H7BZ55 1655 aa15.97■□□□□ 0.15
VPS9D1-206ENST00000567379 ADGBQ8N7X0 1667 aa15.96■□□□□ 0.15
VPS9D1-206ENST00000567379 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
VPS9D1-206ENST00000567379 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
VPS9D1-206ENST00000567379 ARHGEF5Q12774 1597 aa15.95■□□□□ 0.14
VPS9D1-206ENST00000567379 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
VPS9D1-206ENST00000567379 PLEKHH2Q8IVE3 1493 aa15.94■□□□□ 0.14
VPS9D1-206ENST00000567379 SAMD9LQ8IVG5 1584 aa15.94■□□□□ 0.14
VPS9D1-206ENST00000567379 PLCH2O75038 1416 aa15.94■□□□□ 0.14
VPS9D1-206ENST00000567379 SHANK2Q9UPX8 1470 aa15.93■□□□□ 0.14
VPS9D1-206ENST00000567379 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
VPS9D1-206ENST00000567379 ADGRL2O95490 1459 aa15.92■□□□□ 0.14
VPS9D1-206ENST00000567379 ANKRD30AQ9BXX3 1397 aa15.91■□□□□ 0.14
VPS9D1-206ENST00000567379 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
VPS9D1-206ENST00000567379 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
VPS9D1-206ENST00000567379 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
VPS9D1-206ENST00000567379 EFCAB2Q5VUJ9 269 aa15.91■□□□□ 0.14
VPS9D1-206ENST00000567379 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.14
VPS9D1-206ENST00000567379 CCDC141Q6ZP82 1450 aa15.9■□□□□ 0.14
VPS9D1-206ENST00000567379 LMTK3Q96Q04 1460 aa15.9■□□□□ 0.14
VPS9D1-206ENST00000567379 NCOA1Q15788 1441 aa15.89■□□□□ 0.13
VPS9D1-206ENST00000567379 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
VPS9D1-206ENST00000567379 KIAA1107Q9UPP5 1409 aa15.89■□□□□ 0.13
VPS9D1-206ENST00000567379 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
VPS9D1-206ENST00000567379 MBD5Q9P267 1494 aa15.89■□□□□ 0.13
VPS9D1-206ENST00000567379 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
VPS9D1-206ENST00000567379 SYCP2Q9BX26 1530 aa15.87■□□□□ 0.13
VPS9D1-206ENST00000567379 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
VPS9D1-206ENST00000567379 ABCC1P33527 1531 aa15.83■□□□□ 0.12
VPS9D1-206ENST00000567379 ANKRD50Q9ULJ7 1429 aa15.8■□□□□ 0.12
VPS9D1-206ENST00000567379 FANCAO15360 1455 aa15.79■□□□□ 0.12
VPS9D1-206ENST00000567379 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
VPS9D1-206ENST00000567379 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
VPS9D1-206ENST00000567379 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
VPS9D1-206ENST00000567379 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
VPS9D1-206ENST00000567379 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
VPS9D1-206ENST00000567379 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.11
VPS9D1-206ENST00000567379 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
VPS9D1-206ENST00000567379 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
VPS9D1-206ENST00000567379 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-206ENST00000567379 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
VPS9D1-206ENST00000567379 SOCS7O14512 581 aa15.75■□□□□ 0.11
VPS9D1-206ENST00000567379 TRAPPC8Q9Y2L5 1435 aa15.75■□□□□ 0.11
VPS9D1-206ENST00000567379 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-206ENST00000567379 RTEL1-TNFRSF6BF6WH68 1400 aa15.73■□□□□ 0.11
VPS9D1-206ENST00000567379 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-206ENST00000567379 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
VPS9D1-206ENST00000567379 DUOX2Q9NRD8 1548 aa15.72■□□□□ 0.11
VPS9D1-206ENST00000567379 GLI2P10070 1586 aa15.71■□□□□ 0.11
VPS9D1-206ENST00000567379 DENND4BO75064 1496 aaPredicted RBP15.71■□□□□ 0.1
VPS9D1-206ENST00000567379 PZPP20742 1482 aa15.71■□□□□ 0.1
VPS9D1-206ENST00000567379 KDM5DQ9BY66 1539 aa15.69■□□□□ 0.1
VPS9D1-206ENST00000567379 NUP155O75694 1391 aa15.68■□□□□ 0.1
VPS9D1-206ENST00000567379 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
VPS9D1-206ENST00000567379 AFAP1Q8N556 730 aa15.68■□□□□ 0.1
VPS9D1-206ENST00000567379 NEO1Q92859 1461 aa15.67■□□□□ 0.1
VPS9D1-206ENST00000567379 ZNF316A6NFI3 1004 aaPredicted RBP15.67■□□□□ 0.1
VPS9D1-206ENST00000567379 MAP3K4Q9Y6R4 1608 aa15.67■□□□□ 0.1
VPS9D1-206ENST00000567379 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
VPS9D1-206ENST00000567379 ERBINQ96RT1 1412 aa15.67■□□□□ 0.1
VPS9D1-206ENST00000567379 COL17A1Q9UMD9 1497 aaPredicted RBP15.66■□□□□ 0.1
VPS9D1-206ENST00000567379 ATP7AQ04656 1500 aa15.66■□□□□ 0.1
VPS9D1-206ENST00000567379 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
VPS9D1-206ENST00000567379 ANKRD30BQ9BXX2 1392 aa15.65■□□□□ 0.1
VPS9D1-206ENST00000567379 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
VPS9D1-206ENST00000567379 UNC13BO14795 1591 aa15.65■□□□□ 0.1
VPS9D1-206ENST00000567379 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
VPS9D1-206ENST00000567379 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms