RNA–Protein interactions for RNA: ENST00000566050.5

MTHFSD-213, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 1 (best)

Gene MTHFSD, Length 1,270 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-213ENST00000566050 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
MTHFSD-213ENST00000566050 PREX2Q70Z35 1606 aa22.42■■□□□ 1.18
MTHFSD-213ENST00000566050 ARHGAP5Q13017 1502 aa22.42■■□□□ 1.18
MTHFSD-213ENST00000566050 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
MTHFSD-213ENST00000566050 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
MTHFSD-213ENST00000566050 CDC42BPBQ9Y5S2 1711 aa22.38■■□□□ 1.17
MTHFSD-213ENST00000566050 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
MTHFSD-213ENST00000566050 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
MTHFSD-213ENST00000566050 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
MTHFSD-213ENST00000566050 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
MTHFSD-213ENST00000566050 ABCC1P33527 1531 aa22.34■■□□□ 1.17
MTHFSD-213ENST00000566050 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
MTHFSD-213ENST00000566050 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
MTHFSD-213ENST00000566050 KDM5CP41229 1560 aa22.33■■□□□ 1.17
MTHFSD-213ENST00000566050 YEATS2Q9ULM3 1422 aa22.33■■□□□ 1.17
MTHFSD-213ENST00000566050 GPATCH8Q9UKJ3 1502 aaKnown RBP22.33■■□□□ 1.17
MTHFSD-213ENST00000566050 ARHGEF12Q9NZN5 1544 aa22.29■■□□□ 1.16
MTHFSD-213ENST00000566050 TIAM1Q13009 1591 aa22.29■■□□□ 1.16
MTHFSD-213ENST00000566050 ADAMTSL3P82987 1691 aa22.27■■□□□ 1.16
MTHFSD-213ENST00000566050 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
MTHFSD-213ENST00000566050 SAMD9LQ8IVG5 1584 aa22.26■■□□□ 1.15
MTHFSD-213ENST00000566050 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
MTHFSD-213ENST00000566050 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
MTHFSD-213ENST00000566050 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
MTHFSD-213ENST00000566050 HECW2Q9P2P5 1572 aa22.25■■□□□ 1.15
MTHFSD-213ENST00000566050 MLH3Q9UHC1 1453 aa22.24■■□□□ 1.15
MTHFSD-213ENST00000566050 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
MTHFSD-213ENST00000566050 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
MTHFSD-213ENST00000566050 ATP10AO60312 1499 aa22.23■■□□□ 1.15
MTHFSD-213ENST00000566050 MAP3K1Q13233 1512 aa22.23■■□□□ 1.15
MTHFSD-213ENST00000566050 C9orf84Q5VXU9 1444 aa22.22■■□□□ 1.15
MTHFSD-213ENST00000566050 KIAA1107Q9UPP5 1409 aa22.22■■□□□ 1.15
MTHFSD-213ENST00000566050 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
MTHFSD-213ENST00000566050 SYCP2Q9BX26 1530 aa22.21■■□□□ 1.15
MTHFSD-213ENST00000566050 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.14
MTHFSD-213ENST00000566050 DIP2CQ9Y2E4 1556 aa22.2■■□□□ 1.14
MTHFSD-213ENST00000566050 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
MTHFSD-213ENST00000566050 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
MTHFSD-213ENST00000566050 LRRC9Q6ZRR7 1453 aa22.19■■□□□ 1.14
MTHFSD-213ENST00000566050 REREQ9P2R6 1566 aa22.19■■□□□ 1.14
MTHFSD-213ENST00000566050 SUPT6HQ7KZ85 1726 aaKnown RBP22.18■■□□□ 1.14
MTHFSD-213ENST00000566050 MADDQ8WXG6 1647 aa22.18■■□□□ 1.14
MTHFSD-213ENST00000566050 PTPRMP28827 1452 aa22.17■■□□□ 1.14
MTHFSD-213ENST00000566050 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
MTHFSD-213ENST00000566050 ZNF777Q9ULD5 760 aaPredicted RBP22.15■■□□□ 1.14
MTHFSD-213ENST00000566050 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
MTHFSD-213ENST00000566050 MBD5Q9P267 1494 aa22.1■■□□□ 1.13
MTHFSD-213ENST00000566050 HNRNPMP52272 730 aaKnown RBP eCLIP22.1■■□□□ 1.134e-8■■■■□ 20.6
MTHFSD-213ENST00000566050 INO80Q9ULG1 1556 aaPredicted RBP22.1■■□□□ 1.13
MTHFSD-213ENST00000566050 AGLP35573 1532 aa22.1■■□□□ 1.13
MTHFSD-213ENST00000566050 ZNF644Q9H582 1327 aaPredicted RBP22.08■■□□□ 1.13
MTHFSD-213ENST00000566050 ATP7AQ04656 1500 aa22.07■■□□□ 1.12
MTHFSD-213ENST00000566050 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
MTHFSD-213ENST00000566050 RIMS1Q86UR5 1692 aaKnown RBP22.07■■□□□ 1.12
MTHFSD-213ENST00000566050 SPAG9O60271 1321 aaKnown RBP22.06■■□□□ 1.12
MTHFSD-213ENST00000566050 CAMSAP2Q08AD1 1489 aa22.06■■□□□ 1.12
MTHFSD-213ENST00000566050 MYT1LQ9UL68 1186 aa22.05■■□□□ 1.12
MTHFSD-213ENST00000566050 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.12
MTHFSD-213ENST00000566050 MLECQ14165 292 aa22.02■■□□□ 1.12
MTHFSD-213ENST00000566050 PLXNC1O60486 1568 aa22.02■■□□□ 1.12
MTHFSD-213ENST00000566050 CCDC141Q6ZP82 1450 aa22.01■■□□□ 1.11
MTHFSD-213ENST00000566050 RTEL1-TNFRSF6BF6WH68 1400 aa22■■□□□ 1.11
MTHFSD-213ENST00000566050 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
MTHFSD-213ENST00000566050 ARHGEF5Q12774 1597 aa21.99■■□□□ 1.11
MTHFSD-213ENST00000566050 MIA2Q96PC5 1412 aa21.98■■□□□ 1.11
MTHFSD-213ENST00000566050 A2MP01023 1474 aa21.97■■□□□ 1.11
MTHFSD-213ENST00000566050 APLP2Q06481 763 aa21.95■■□□□ 1.1
MTHFSD-213ENST00000566050 RSPH4AQ5TD94 716 aa21.95■■□□□ 1.1
MTHFSD-213ENST00000566050 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
MTHFSD-213ENST00000566050 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
MTHFSD-213ENST00000566050 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.1
MTHFSD-213ENST00000566050 MAST1Q9Y2H9 1570 aa21.88■■□□□ 1.09
MTHFSD-213ENST00000566050 DHX29Q7Z478 1369 aaKnown RBP21.87■■□□□ 1.09
MTHFSD-213ENST00000566050 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
MTHFSD-213ENST00000566050 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
MTHFSD-213ENST00000566050 MROH2AA6NES4 1674 aa21.83■■□□□ 1.09
MTHFSD-213ENST00000566050 PTPN23Q9H3S7 1636 aa21.83■■□□□ 1.08
MTHFSD-213ENST00000566050 C3P01024 1663 aa21.82■■□□□ 1.08
MTHFSD-213ENST00000566050 TSPY4P0CV99 314 aa21.82■■□□□ 1.08
MTHFSD-213ENST00000566050 TSPY10P0CW01 314 aa21.82■■□□□ 1.08
MTHFSD-213ENST00000566050 CEBPAP49715 358 aaPredicted RBP21.82■■□□□ 1.08
MTHFSD-213ENST00000566050 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
MTHFSD-213ENST00000566050 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
MTHFSD-213ENST00000566050 PREX1Q8TCU6 1659 aa21.8■■□□□ 1.08
MTHFSD-213ENST00000566050 ESF1Q9H501 851 aaKnown RBP21.8■■□□□ 1.08
MTHFSD-213ENST00000566050 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
MTHFSD-213ENST00000566050 FAM135AQ9P2D6 1515 aa21.78■■□□□ 1.08
MTHFSD-213ENST00000566050 ABCC5O15440 1437 aa21.78■■□□□ 1.08
MTHFSD-213ENST00000566050 CROCC2H7BZ55 1655 aa21.77■■□□□ 1.08
MTHFSD-213ENST00000566050 NPATQ14207 1427 aa21.76■■□□□ 1.07
MTHFSD-213ENST00000566050 DNMT1P26358 1616 aaKnown RBP21.76■■□□□ 1.07
MTHFSD-213ENST00000566050 ZMYM3Q14202 1370 aa21.75■■□□□ 1.07
MTHFSD-213ENST00000566050 GGT6Q6P531 493 aa21.75■■□□□ 1.07
MTHFSD-213ENST00000566050 CLTCQ00610 1675 aaKnown RBP21.75■■□□□ 1.07
MTHFSD-213ENST00000566050 DAPK1P53355 1430 aa21.74■■□□□ 1.07
MTHFSD-213ENST00000566050 UHRF1BP1Q6BDS2 1440 aa21.74■■□□□ 1.07
MTHFSD-213ENST00000566050 KDM5DQ9BY66 1539 aa21.72■■□□□ 1.07
MTHFSD-213ENST00000566050 KIF3BO15066 747 aa21.72■■□□□ 1.07
MTHFSD-213ENST00000566050 RNF17Q9BXT8 1623 aaKnown RBP21.72■■□□□ 1.07
MTHFSD-213ENST00000566050 EIF2AK4Q9P2K8 1649 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms