RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PREX2Q70Z35 1606 aa26.88■■□□□ 1.89
USB1-211ENST00000565662 CEP162Q5TB80 1403 aa26.88■■□□□ 1.89
USB1-211ENST00000565662 POGZQ7Z3K3 1410 aa26.88■■□□□ 1.89
USB1-211ENST00000565662 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
USB1-211ENST00000565662 ZNF518AQ6AHZ1 1483 aa26.84■■□□□ 1.89
USB1-211ENST00000565662 ZFYVE16Q7Z3T8 1539 aa26.84■■□□□ 1.89
USB1-211ENST00000565662 CDC42BPBQ9Y5S2 1711 aa26.8■■□□□ 1.88
USB1-211ENST00000565662 BCORL1Q5H9F3 1711 aa26.77■■□□□ 1.88
USB1-211ENST00000565662 CDC42BPAQ5VT25 1732 aa26.76■■□□□ 1.88
USB1-211ENST00000565662 KDM5CP41229 1560 aa26.76■■□□□ 1.87
USB1-211ENST00000565662 EHBP1L1Q8N3D4 1523 aa26.76■■□□□ 1.87
USB1-211ENST00000565662 ADAMTSL3P82987 1691 aa26.76■■□□□ 1.87
USB1-211ENST00000565662 MTUS2Q5JR59 1369 aa26.75■■□□□ 1.87
USB1-211ENST00000565662 ABCC1P33527 1531 aa26.74■■□□□ 1.87
USB1-211ENST00000565662 HECW2Q9P2P5 1572 aa26.72■■□□□ 1.87
USB1-211ENST00000565662 ARID4BQ4LE39 1312 aaPredicted RBP26.7■■□□□ 1.87
USB1-211ENST00000565662 PLEKHH2Q8IVE3 1493 aa26.7■■□□□ 1.87
USB1-211ENST00000565662 ITSN2Q9NZM3 1697 aa26.7■■□□□ 1.86
USB1-211ENST00000565662 C9orf84Q5VXU9 1444 aa26.69■■□□□ 1.86
USB1-211ENST00000565662 ATP10AO60312 1499 aa26.68■■□□□ 1.86
USB1-211ENST00000565662 REREQ9P2R6 1566 aa26.67■■□□□ 1.86
USB1-211ENST00000565662 MLH3Q9UHC1 1453 aa26.66■■□□□ 1.86
USB1-211ENST00000565662 YEATS2Q9ULM3 1422 aa26.65■■□□□ 1.86
USB1-211ENST00000565662 CCNB3Q8WWL7 1395 aa26.65■■□□□ 1.86
USB1-211ENST00000565662 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
USB1-211ENST00000565662 GPATCH8Q9UKJ3 1502 aaKnown RBP26.64■■□□□ 1.85
USB1-211ENST00000565662 PTPRMP28827 1452 aa26.62■■□□□ 1.85
USB1-211ENST00000565662 MADDQ8WXG6 1647 aa26.62■■□□□ 1.85
USB1-211ENST00000565662 KIAA1107Q9UPP5 1409 aa26.61■■□□□ 1.85
USB1-211ENST00000565662 SUPT6HQ7KZ85 1726 aaKnown RBP26.6■■□□□ 1.85
USB1-211ENST00000565662 TIAM1Q13009 1591 aa26.58■■□□□ 1.85
USB1-211ENST00000565662 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
USB1-211ENST00000565662 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
USB1-211ENST00000565662 DIP2CQ9Y2E4 1556 aa26.57■■□□□ 1.84
USB1-211ENST00000565662 CFDP1Q9UEE9 299 aaPredicted RBP26.56■■□□□ 1.84
USB1-211ENST00000565662 MYT1LQ9UL68 1186 aa26.55■■□□□ 1.84
USB1-211ENST00000565662 FER1L4A9Z1Z3 1794 aa26.55■■□□□ 1.84
USB1-211ENST00000565662 SYCP2Q9BX26 1530 aa26.55■■□□□ 1.84
USB1-211ENST00000565662 RIMS1Q86UR5 1692 aaKnown RBP26.54■■□□□ 1.84
USB1-211ENST00000565662 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
USB1-211ENST00000565662 AGLP35573 1532 aa26.52■■□□□ 1.84
USB1-211ENST00000565662 ABCA6Q8N139 1617 aa26.52■■□□□ 1.84
USB1-211ENST00000565662 ARHGEF12Q9NZN5 1544 aa26.52■■□□□ 1.84
USB1-211ENST00000565662 TRAPPC8Q9Y2L5 1435 aa26.52■■□□□ 1.84
USB1-211ENST00000565662 KIDINS220Q9ULH0 1771 aa26.49■■□□□ 1.83
USB1-211ENST00000565662 SIGLEC1Q9BZZ2 1709 aa26.49■■□□□ 1.83
USB1-211ENST00000565662 ZNF777Q9ULD5 760 aaPredicted RBP26.48■■□□□ 1.83
USB1-211ENST00000565662 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
USB1-211ENST00000565662 NCOA2Q15596 1464 aa26.46■■□□□ 1.83
USB1-211ENST00000565662 INO80Q9ULG1 1556 aaPredicted RBP26.45■■□□□ 1.82
USB1-211ENST00000565662 ATP7AQ04656 1500 aa26.44■■□□□ 1.82
USB1-211ENST00000565662 SPAG9O60271 1321 aaKnown RBP26.44■■□□□ 1.82
USB1-211ENST00000565662 LRRC9Q6ZRR7 1453 aa26.44■■□□□ 1.82
USB1-211ENST00000565662 RSPH4AQ5TD94 716 aa26.41■■□□□ 1.82
USB1-211ENST00000565662 ADGBQ8N7X0 1667 aa26.39■■□□□ 1.82
USB1-211ENST00000565662 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.81
USB1-211ENST00000565662 CNTLNQ9NXG0 1405 aa26.39■■□□□ 1.81
USB1-211ENST00000565662 APLP2Q06481 763 aa26.37■■□□□ 1.81
USB1-211ENST00000565662 MLECQ14165 292 aa26.36■■□□□ 1.81
USB1-211ENST00000565662 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
USB1-211ENST00000565662 PLXNC1O60486 1568 aa26.35■■□□□ 1.81
USB1-211ENST00000565662 HNRNPMP52272 730 aaKnown RBP eCLIP26.35■■□□□ 1.81
USB1-211ENST00000565662 ESF1Q9H501 851 aaKnown RBP26.35■■□□□ 1.81
USB1-211ENST00000565662 CAMSAP2Q08AD1 1489 aa26.35■■□□□ 1.81
USB1-211ENST00000565662 MBD5Q9P267 1494 aa26.34■■□□□ 1.81
USB1-211ENST00000565662 ARHGEF5Q12774 1597 aa26.33■■□□□ 1.81
USB1-211ENST00000565662 MIA2Q96PC5 1412 aa26.31■■□□□ 1.8
USB1-211ENST00000565662 A2MP01023 1474 aa26.31■■□□□ 1.8
USB1-211ENST00000565662 MROH2AA6NES4 1674 aa26.31■■□□□ 1.8
USB1-211ENST00000565662 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
USB1-211ENST00000565662 LMTK3Q96Q04 1460 aa26.3■■□□□ 1.8
USB1-211ENST00000565662 SETD1BQ9UPS6 1966 aaKnown RBP26.28■■□□□ 1.8
USB1-211ENST00000565662 FAM135AQ9P2D6 1515 aa26.27■■□□□ 1.8
USB1-211ENST00000565662 MYOM3Q5VTT5 1437 aa26.26■■□□□ 1.79
USB1-211ENST00000565662 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
USB1-211ENST00000565662 C3P01024 1663 aa26.22■■□□□ 1.79
USB1-211ENST00000565662 ZNF644Q9H582 1327 aaPredicted RBP26.21■■□□□ 1.79
USB1-211ENST00000565662 TSPY4P0CV99 314 aa26.21■■□□□ 1.79
USB1-211ENST00000565662 TSPY10P0CW01 314 aa26.21■■□□□ 1.79
USB1-211ENST00000565662 UHRF1BP1Q6BDS2 1440 aa26.21■■□□□ 1.79
USB1-211ENST00000565662 MAST1Q9Y2H9 1570 aa26.2■■□□□ 1.79
USB1-211ENST00000565662 DHX29Q7Z478 1369 aaKnown RBP26.18■■□□□ 1.78
USB1-211ENST00000565662 NPATQ14207 1427 aa26.17■■□□□ 1.78
USB1-211ENST00000565662 KANK4Q5T7N3 995 aaPredicted RBP26.14■■□□□ 1.78
USB1-211ENST00000565662 PLPPR3Q6T4P5 718 aa26.12■■□□□ 1.77
USB1-211ENST00000565662 SHANK2Q9UPX8 1470 aa26.11■■□□□ 1.77
USB1-211ENST00000565662 EIF2AK4Q9P2K8 1649 aaKnown RBP26.1■■□□□ 1.77
USB1-211ENST00000565662 CLTCQ00610 1675 aaKnown RBP26.1■■□□□ 1.77
USB1-211ENST00000565662 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
USB1-211ENST00000565662 CROCC2H7BZ55 1655 aa26.07■■□□□ 1.76
USB1-211ENST00000565662 KDM5DQ9BY66 1539 aa26.07■■□□□ 1.76
USB1-211ENST00000565662 ZMYM3Q14202 1370 aa26.07■■□□□ 1.76
USB1-211ENST00000565662 CEBPAP49715 358 aaPredicted RBP26.05■■□□□ 1.76
USB1-211ENST00000565662 GGT6Q6P531 493 aa26.05■■□□□ 1.76
USB1-211ENST00000565662 FGD6Q6ZV73 1430 aa26.05■■□□□ 1.76
USB1-211ENST00000565662 TCOF1Q13428 1488 aaKnown RBP26.04■■□□□ 1.76
USB1-211ENST00000565662 ZC3H13Q5T200 1668 aaKnown RBP26.04■■□□□ 1.76
USB1-211ENST00000565662 DMRT2Q9Y5R5 561 aa26.03■■□□□ 1.76
USB1-211ENST00000565662 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
USB1-211ENST00000565662 DUOX2Q9NRD8 1548 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms