RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 MAGI2Q86UL8 1455 aa30.85■■■□□ 2.53
SPSB3-207ENST00000565550 POGZQ7Z3K3 1410 aa30.84■■■□□ 2.53
SPSB3-207ENST00000565550 KIF14Q15058 1648 aa30.83■■■□□ 2.53
SPSB3-207ENST00000565550 CLIP1P30622 1438 aa30.82■■■□□ 2.52
SPSB3-207ENST00000565550 MYO5CQ9NQX4 1742 aa30.79■■■□□ 2.52
SPSB3-207ENST00000565550 CASKIN1Q8WXD9 1431 aa30.78■■■□□ 2.52
SPSB3-207ENST00000565550 MLECQ14165 292 aa30.77■■■□□ 2.52
SPSB3-207ENST00000565550 LRRIQ1Q96JM4 1722 aa30.77■■■□□ 2.52
SPSB3-207ENST00000565550 ARHGAP5Q13017 1502 aa30.74■■■□□ 2.51
SPSB3-207ENST00000565550 PLPPR3Q6T4P5 718 aa30.74■■■□□ 2.51
SPSB3-207ENST00000565550 SIGLEC1Q9BZZ2 1709 aa30.73■■■□□ 2.51
SPSB3-207ENST00000565550 AFAP1Q8N556 730 aa30.73■■■□□ 2.51
SPSB3-207ENST00000565550 RIMS1Q86UR5 1692 aaKnown RBP30.73■■■□□ 2.51
SPSB3-207ENST00000565550 PCF11O94913 1555 aaKnown RBP30.72■■■□□ 2.51
SPSB3-207ENST00000565550 ATP10AO60312 1499 aa30.71■■■□□ 2.51
SPSB3-207ENST00000565550 CCDC18Q5T9S5 1454 aa30.71■■■□□ 2.51
SPSB3-207ENST00000565550 ZNF518AQ6AHZ1 1483 aa30.68■■■□□ 2.5
SPSB3-207ENST00000565550 C9orf84Q5VXU9 1444 aa30.66■■■□□ 2.5
SPSB3-207ENST00000565550 MYT1LQ9UL68 1186 aa30.66■■■□□ 2.5
SPSB3-207ENST00000565550 LMTK3Q96Q04 1460 aa30.65■■■□□ 2.5
SPSB3-207ENST00000565550 FYCO1Q9BQS8 1478 aa30.62■■■□□ 2.49
SPSB3-207ENST00000565550 CDC42BPBQ9Y5S2 1711 aa30.61■■■□□ 2.49
SPSB3-207ENST00000565550 KDM5CP41229 1560 aa30.59■■■□□ 2.49
SPSB3-207ENST00000565550 HSPA2P54652 639 aa30.58■■■□□ 2.49
SPSB3-207ENST00000565550 ARHGEF12Q9NZN5 1544 aa30.56■■■□□ 2.48
SPSB3-207ENST00000565550 TRAPPC8Q9Y2L5 1435 aa30.56■■■□□ 2.48
SPSB3-207ENST00000565550 PREX2Q70Z35 1606 aa30.55■■■□□ 2.48
SPSB3-207ENST00000565550 FER1L4A9Z1Z3 1794 aa30.54■■■□□ 2.48
SPSB3-207ENST00000565550 MLH3Q9UHC1 1453 aa30.53■■■□□ 2.48
SPSB3-207ENST00000565550 ABCC1P33527 1531 aa30.52■■■□□ 2.48
SPSB3-207ENST00000565550 CEBPAP49715 358 aaPredicted RBP30.51■■■□□ 2.47
SPSB3-207ENST00000565550 ZNF777Q9ULD5 760 aaPredicted RBP30.51■■■□□ 2.47
SPSB3-207ENST00000565550 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
SPSB3-207ENST00000565550 CDC42BPAQ5VT25 1732 aa30.46■■■□□ 2.47
SPSB3-207ENST00000565550 GPATCH8Q9UKJ3 1502 aaKnown RBP30.45■■■□□ 2.47
SPSB3-207ENST00000565550 ABCA6Q8N139 1617 aa30.44■■■□□ 2.46
SPSB3-207ENST00000565550 ITSN2Q9NZM3 1697 aa30.43■■■□□ 2.46
SPSB3-207ENST00000565550 FBXO41Q8TF61 875 aa30.43■■■□□ 2.46
SPSB3-207ENST00000565550 REREQ9P2R6 1566 aa30.43■■■□□ 2.46
SPSB3-207ENST00000565550 HNRNPMP52272 730 aaKnown RBP eCLIP30.41■■■□□ 2.46
SPSB3-207ENST00000565550 CFDP1Q9UEE9 299 aaPredicted RBP30.4■■■□□ 2.46
SPSB3-207ENST00000565550 MTUS2Q5JR59 1369 aa30.39■■■□□ 2.45
SPSB3-207ENST00000565550 SAMD9LQ8IVG5 1584 aa30.37■■■□□ 2.45
SPSB3-207ENST00000565550 CCNB3Q8WWL7 1395 aa30.37■■■□□ 2.45
SPSB3-207ENST00000565550 AGLP35573 1532 aa30.37■■■□□ 2.45
SPSB3-207ENST00000565550 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
SPSB3-207ENST00000565550 ESF1Q9H501 851 aaKnown RBP30.35■■■□□ 2.45
SPSB3-207ENST00000565550 SPAG9O60271 1321 aaKnown RBP30.35■■■□□ 2.45
SPSB3-207ENST00000565550 SYCP2Q9BX26 1530 aa30.34■■■□□ 2.45
SPSB3-207ENST00000565550 LOC105371045A0A1W2PR82 267 aa30.34■■■□□ 2.45
SPSB3-207ENST00000565550 KIAA1107Q9UPP5 1409 aa30.31■■■□□ 2.44
SPSB3-207ENST00000565550 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
SPSB3-207ENST00000565550 PREX1Q8TCU6 1659 aa30.29■■■□□ 2.44
SPSB3-207ENST00000565550 PLEKHH2Q8IVE3 1493 aa30.28■■■□□ 2.44
SPSB3-207ENST00000565550 UHRF1BP1Q6BDS2 1440 aa30.26■■■□□ 2.43
SPSB3-207ENST00000565550 ZNF644Q9H582 1327 aaPredicted RBP30.24■■■□□ 2.43
SPSB3-207ENST00000565550 SETD1BQ9UPS6 1966 aaKnown RBP30.23■■■□□ 2.43
SPSB3-207ENST00000565550 C3P01024 1663 aa30.21■■■□□ 2.43
SPSB3-207ENST00000565550 CNTLNQ9NXG0 1405 aa30.21■■■□□ 2.43
SPSB3-207ENST00000565550 ATP7AQ04656 1500 aa30.2■■■□□ 2.42
SPSB3-207ENST00000565550 EHBP1L1Q8N3D4 1523 aa30.2■■■□□ 2.42
SPSB3-207ENST00000565550 CERKQ8TCT0 537 aa30.18■■■□□ 2.42
SPSB3-207ENST00000565550 TIAM1Q13009 1591 aa30.18■■■□□ 2.42
SPSB3-207ENST00000565550 DMRT2Q9Y5R5 561 aa30.17■■■□□ 2.42
SPSB3-207ENST00000565550 A2MP01023 1474 aa30.16■■■□□ 2.42
SPSB3-207ENST00000565550 INO80Q9ULG1 1556 aaPredicted RBP30.15■■■□□ 2.42
SPSB3-207ENST00000565550 ZMYM3Q14202 1370 aa30.14■■■□□ 2.41
SPSB3-207ENST00000565550 SUPT6HQ7KZ85 1726 aaKnown RBP30.13■■■□□ 2.41
SPSB3-207ENST00000565550 MBD5Q9P267 1494 aa30.12■■■□□ 2.41
SPSB3-207ENST00000565550 GGT6Q6P531 493 aa30.12■■■□□ 2.41
SPSB3-207ENST00000565550 STRCQ7RTU9 1775 aa30.1■■■□□ 2.41
SPSB3-207ENST00000565550 PLXNC1O60486 1568 aa30.09■■■□□ 2.41
SPSB3-207ENST00000565550 NCOA2Q15596 1464 aa30.07■■■□□ 2.4
SPSB3-207ENST00000565550 NPATQ14207 1427 aa30.05■■■□□ 2.4
SPSB3-207ENST00000565550 RTEL1-TNFRSF6BF6WH68 1400 aa30.05■■■□□ 2.4
SPSB3-207ENST00000565550 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
SPSB3-207ENST00000565550 PPP6R1Q9UPN7 881 aa30.02■■■□□ 2.4
SPSB3-207ENST00000565550 PTPRTO14522 1441 aa30■■■□□ 2.39
SPSB3-207ENST00000565550 DHX29Q7Z478 1369 aaKnown RBP30■■■□□ 2.39
SPSB3-207ENST00000565550 VPS8Q8N3P4 1428 aa29.99■■■□□ 2.39
SPSB3-207ENST00000565550 CLTCQ00610 1675 aaKnown RBP29.99■■■□□ 2.39
SPSB3-207ENST00000565550 ADGBQ8N7X0 1667 aa29.99■■■□□ 2.39
SPSB3-207ENST00000565550 RSPH4AQ5TD94 716 aa29.99■■■□□ 2.39
SPSB3-207ENST00000565550 CAMSAP2Q08AD1 1489 aa29.97■■■□□ 2.39
SPSB3-207ENST00000565550 CCDC141Q6ZP82 1450 aa29.97■■■□□ 2.39
SPSB3-207ENST00000565550 NCOA1Q15788 1441 aa29.96■■■□□ 2.39
SPSB3-207ENST00000565550 PTPRKQ15262 1439 aa29.96■■■□□ 2.39
SPSB3-207ENST00000565550 KIF3BO15066 747 aa29.93■■■□□ 2.38
SPSB3-207ENST00000565550 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
SPSB3-207ENST00000565550 KANK4Q5T7N3 995 aaPredicted RBP29.91■■■□□ 2.38
SPSB3-207ENST00000565550 CAMSAP1Q5T5Y3 1602 aa29.91■■■□□ 2.38
SPSB3-207ENST00000565550 TSPY4P0CV99 314 aa29.9■■■□□ 2.38
SPSB3-207ENST00000565550 TSPY10P0CW01 314 aa29.9■■■□□ 2.38
SPSB3-207ENST00000565550 NCKAP5LQ9HCH0 1330 aa29.89■■■□□ 2.38
SPSB3-207ENST00000565550 MYO3AQ8NEV4 1616 aa29.83■■■□□ 2.37
SPSB3-207ENST00000565550 ARHGEF5Q12774 1597 aa29.83■■■□□ 2.37
SPSB3-207ENST00000565550 FBXO31Q5XUX0 539 aaPredicted RBP29.82■■■□□ 2.36
SPSB3-207ENST00000565550 WASHC2CQ9Y4E1 1318 aa29.81■■■□□ 2.36
SPSB3-207ENST00000565550 PKD2Q13563 968 aa29.81■■■□□ 2.36
SPSB3-207ENST00000565550 CEP170BQ9Y4F5 1589 aaPredicted RBP29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms