RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 CDC42BPBQ9Y5S2 1711 aa21.7■■□□□ 1.06
PKD1-228ENST00000564865 KDM4FA0A1W2PPD8 638 aa21.7■■□□□ 1.06
PKD1-228ENST00000564865 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
PKD1-228ENST00000564865 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
PKD1-228ENST00000564865 EHBP1L1Q8N3D4 1523 aa21.69■■□□□ 1.06
PKD1-228ENST00000564865 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
PKD1-228ENST00000564865 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
PKD1-228ENST00000564865 TIAM1Q13009 1591 aa21.68■■□□□ 1.06
PKD1-228ENST00000564865 CDC42BPAQ5VT25 1732 aa21.67■■□□□ 1.06
PKD1-228ENST00000564865 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
PKD1-228ENST00000564865 POGZQ7Z3K3 1410 aa21.66■■□□□ 1.06
PKD1-228ENST00000564865 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
PKD1-228ENST00000564865 APLP2Q06481 763 aa21.64■■□□□ 1.05
PKD1-228ENST00000564865 AFAP1Q8N556 730 aa21.64■■□□□ 1.05
PKD1-228ENST00000564865 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
PKD1-228ENST00000564865 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
PKD1-228ENST00000564865 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
PKD1-228ENST00000564865 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
PKD1-228ENST00000564865 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
PKD1-228ENST00000564865 ARID4BQ4LE39 1312 aaPredicted RBP21.59■■□□□ 1.05
PKD1-228ENST00000564865 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
PKD1-228ENST00000564865 YEATS2Q9ULM3 1422 aa21.59■■□□□ 1.05
PKD1-228ENST00000564865 ABCC1P33527 1531 aa21.59■■□□□ 1.05
PKD1-228ENST00000564865 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
PKD1-228ENST00000564865 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
PKD1-228ENST00000564865 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
PKD1-228ENST00000564865 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.05
PKD1-228ENST00000564865 MAP3K1Q13233 1512 aa21.58■■□□□ 1.04
PKD1-228ENST00000564865 ARHGEF40Q8TER5 1519 aa21.58■■□□□ 1.04
PKD1-228ENST00000564865 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
PKD1-228ENST00000564865 HNRNPMP52272 730 aaKnown RBP eCLIP21.57■■□□□ 1.04
PKD1-228ENST00000564865 SAMD9LQ8IVG5 1584 aa21.57■■□□□ 1.04
PKD1-228ENST00000564865 ITSN2Q9NZM3 1697 aa21.55■■□□□ 1.04
PKD1-228ENST00000564865 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
PKD1-228ENST00000564865 KDM5CP41229 1560 aa21.53■■□□□ 1.04
PKD1-228ENST00000564865 SYCP2Q9BX26 1530 aa21.52■■□□□ 1.04
PKD1-228ENST00000564865 PLEKHH2Q8IVE3 1493 aa21.51■■□□□ 1.03
PKD1-228ENST00000564865 KIAA1107Q9UPP5 1409 aa21.5■■□□□ 1.03
PKD1-228ENST00000564865 ATP10AO60312 1499 aa21.5■■□□□ 1.03
PKD1-228ENST00000564865 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
PKD1-228ENST00000564865 MLH3Q9UHC1 1453 aa21.48■■□□□ 1.03
PKD1-228ENST00000564865 SPAG9O60271 1321 aaKnown RBP21.47■■□□□ 1.03
PKD1-228ENST00000564865 MLECQ14165 292 aa21.46■■□□□ 1.03
PKD1-228ENST00000564865 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
PKD1-228ENST00000564865 BCORL1Q5H9F3 1711 aa21.43■■□□□ 1.02
PKD1-228ENST00000564865 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
PKD1-228ENST00000564865 DIP2CQ9Y2E4 1556 aa21.43■■□□□ 1.02
PKD1-228ENST00000564865 CAMSAP2Q08AD1 1489 aa21.42■■□□□ 1.02
PKD1-228ENST00000564865 ADAMTSL3P82987 1691 aa21.41■■□□□ 1.02
PKD1-228ENST00000564865 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
PKD1-228ENST00000564865 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
PKD1-228ENST00000564865 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
PKD1-228ENST00000564865 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.02
PKD1-228ENST00000564865 RSPH4AQ5TD94 716 aa21.37■■□□□ 1.01
PKD1-228ENST00000564865 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
PKD1-228ENST00000564865 MADDQ8WXG6 1647 aa21.37■■□□□ 1.01
PKD1-228ENST00000564865 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
PKD1-228ENST00000564865 PTPRMP28827 1452 aa21.34■■□□□ 1.01
PKD1-228ENST00000564865 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
PKD1-228ENST00000564865 PLPPR3Q6T4P5 718 aa21.34■■□□□ 1.01
PKD1-228ENST00000564865 REREQ9P2R6 1566 aa21.34■■□□□ 1.01
PKD1-228ENST00000564865 INO80Q9ULG1 1556 aaPredicted RBP21.33■■□□□ 1.01
PKD1-228ENST00000564865 TSPY4P0CV99 314 aa21.33■■□□□ 1.01
PKD1-228ENST00000564865 TSPY10P0CW01 314 aa21.33■■□□□ 1.01
PKD1-228ENST00000564865 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
PKD1-228ENST00000564865 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
PKD1-228ENST00000564865 PPARGC1BQ86YN6 1023 aaKnown RBP21.3■■□□□ 1
PKD1-228ENST00000564865 ARHGEF5Q12774 1597 aa21.3■■□□□ 1
PKD1-228ENST00000564865 A2MP01023 1474 aa21.29■■□□□ 1
PKD1-228ENST00000564865 AGLP35573 1532 aa21.29■■□□□ 1
PKD1-228ENST00000564865 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
PKD1-228ENST00000564865 PTPN23Q9H3S7 1636 aa21.26■□□□□ 0.99
PKD1-228ENST00000564865 FER1L4A9Z1Z3 1794 aa21.26■□□□□ 0.99
PKD1-228ENST00000564865 ESF1Q9H501 851 aaKnown RBP21.26■□□□□ 0.99
PKD1-228ENST00000564865 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
PKD1-228ENST00000564865 DHX29Q7Z478 1369 aaKnown RBP21.23■□□□□ 0.99
PKD1-228ENST00000564865 GGT6Q6P531 493 aa21.22■□□□□ 0.99
PKD1-228ENST00000564865 CEBPAP49715 358 aaPredicted RBP21.21■□□□□ 0.99
PKD1-228ENST00000564865 FAM50AQ14320 339 aaKnown RBP21.21■□□□□ 0.99
PKD1-228ENST00000564865 PLXNC1O60486 1568 aa21.21■□□□□ 0.99
PKD1-228ENST00000564865 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
PKD1-228ENST00000564865 ABCC5O15440 1437 aa21.19■□□□□ 0.98
PKD1-228ENST00000564865 KIF3BO15066 747 aa21.18■□□□□ 0.98
PKD1-228ENST00000564865 MAST1Q9Y2H9 1570 aa21.18■□□□□ 0.98
PKD1-228ENST00000564865 DAPK1P53355 1430 aa21.16■□□□□ 0.98
PKD1-228ENST00000564865 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
PKD1-228ENST00000564865 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
PKD1-228ENST00000564865 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
PKD1-228ENST00000564865 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
PKD1-228ENST00000564865 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
PKD1-228ENST00000564865 CROCC2H7BZ55 1655 aa21.11■□□□□ 0.97
PKD1-228ENST00000564865 PPP6R1Q9UPN7 881 aa21.1■□□□□ 0.97
PKD1-228ENST00000564865 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
PKD1-228ENST00000564865 KIF15Q9NS87 1388 aa21.09■□□□□ 0.97
PKD1-228ENST00000564865 C3P01024 1663 aa21.08■□□□□ 0.96
PKD1-228ENST00000564865 CLTCQ00610 1675 aaKnown RBP21.08■□□□□ 0.96
PKD1-228ENST00000564865 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
PKD1-228ENST00000564865 ANKRD30AQ9BXX3 1397 aa21.06■□□□□ 0.96
PKD1-228ENST00000564865 LMTK3Q96Q04 1460 aa21.05■□□□□ 0.96
PKD1-228ENST00000564865 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms