RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 ARHGAP5Q13017 1502 aa23.84■■□□□ 1.41
SNX29-203ENST00000564111 POGZQ7Z3K3 1410 aa23.82■■□□□ 1.4
SNX29-203ENST00000564111 ZFYVE16Q7Z3T8 1539 aa23.82■■□□□ 1.4
SNX29-203ENST00000564111 CDC42BPBQ9Y5S2 1711 aa23.8■■□□□ 1.4
SNX29-203ENST00000564111 RAPGEF3O95398 923 aa23.79■■□□□ 1.4
SNX29-203ENST00000564111 SCAPERQ9BY12 1400 aa23.77■■□□□ 1.4
SNX29-203ENST00000564111 CDC42BPAQ5VT25 1732 aa23.77■■□□□ 1.4
SNX29-203ENST00000564111 ZNF518AQ6AHZ1 1483 aa23.77■■□□□ 1.4
SNX29-203ENST00000564111 BCORL1Q5H9F3 1711 aa23.76■■□□□ 1.39
SNX29-203ENST00000564111 ADAMTSL3P82987 1691 aa23.75■■□□□ 1.39
SNX29-203ENST00000564111 EHBP1L1Q8N3D4 1523 aa23.75■■□□□ 1.39
SNX29-203ENST00000564111 ITSN2Q9NZM3 1697 aa23.73■■□□□ 1.39
SNX29-203ENST00000564111 KDM5CP41229 1560 aa23.73■■□□□ 1.39
SNX29-203ENST00000564111 ABCC1P33527 1531 aa23.72■■□□□ 1.39
SNX29-203ENST00000564111 HECW2Q9P2P5 1572 aa23.7■■□□□ 1.38
SNX29-203ENST00000564111 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
SNX29-203ENST00000564111 PLEKHH2Q8IVE3 1493 aa23.68■■□□□ 1.38
SNX29-203ENST00000564111 REREQ9P2R6 1566 aa23.66■■□□□ 1.38
SNX29-203ENST00000564111 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
SNX29-203ENST00000564111 ATP10AO60312 1499 aa23.65■■□□□ 1.38
SNX29-203ENST00000564111 VPS8Q8N3P4 1428 aa23.64■■□□□ 1.37
SNX29-203ENST00000564111 SUPT6HQ7KZ85 1726 aaKnown RBP23.63■■□□□ 1.37
SNX29-203ENST00000564111 MLH3Q9UHC1 1453 aa23.63■■□□□ 1.37
SNX29-203ENST00000564111 ARID4BQ4LE39 1312 aaPredicted RBP23.62■■□□□ 1.37
SNX29-203ENST00000564111 GPATCH8Q9UKJ3 1502 aaKnown RBP23.62■■□□□ 1.37
SNX29-203ENST00000564111 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
SNX29-203ENST00000564111 MADDQ8WXG6 1647 aa23.61■■□□□ 1.37
SNX29-203ENST00000564111 YEATS2Q9ULM3 1422 aa23.61■■□□□ 1.37
SNX29-203ENST00000564111 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
SNX29-203ENST00000564111 SAMD9LQ8IVG5 1584 aa23.6■■□□□ 1.37
SNX29-203ENST00000564111 MAP3K1Q13233 1512 aa23.6■■□□□ 1.37
SNX29-203ENST00000564111 KIAA1107Q9UPP5 1409 aa23.58■■□□□ 1.37
SNX29-203ENST00000564111 DIP2CQ9Y2E4 1556 aa23.58■■□□□ 1.37
SNX29-203ENST00000564111 PTPRMP28827 1452 aa23.57■■□□□ 1.36
SNX29-203ENST00000564111 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
SNX29-203ENST00000564111 RIMS1Q86UR5 1692 aaKnown RBP23.57■■□□□ 1.36
SNX29-203ENST00000564111 ABCA6Q8N139 1617 aa23.55■■□□□ 1.36
SNX29-203ENST00000564111 SYCP2Q9BX26 1530 aa23.54■■□□□ 1.36
SNX29-203ENST00000564111 AGLP35573 1532 aa23.53■■□□□ 1.36
SNX29-203ENST00000564111 ARHGEF12Q9NZN5 1544 aa23.53■■□□□ 1.36
SNX29-203ENST00000564111 SIGLEC1Q9BZZ2 1709 aa23.52■■□□□ 1.36
SNX29-203ENST00000564111 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.36
SNX29-203ENST00000564111 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
SNX29-203ENST00000564111 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
SNX29-203ENST00000564111 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
SNX29-203ENST00000564111 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
SNX29-203ENST00000564111 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
SNX29-203ENST00000564111 NCOA2Q15596 1464 aa23.47■■□□□ 1.35
SNX29-203ENST00000564111 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
SNX29-203ENST00000564111 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
SNX29-203ENST00000564111 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
SNX29-203ENST00000564111 ADGBQ8N7X0 1667 aa23.45■■□□□ 1.34
SNX29-203ENST00000564111 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
SNX29-203ENST00000564111 SPAG9O60271 1321 aaKnown RBP23.42■■□□□ 1.34
SNX29-203ENST00000564111 RTEL1-TNFRSF6BF6WH68 1400 aa23.39■■□□□ 1.33
SNX29-203ENST00000564111 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
SNX29-203ENST00000564111 RSPH4AQ5TD94 716 aa23.38■■□□□ 1.33
SNX29-203ENST00000564111 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
SNX29-203ENST00000564111 CAMSAP2Q08AD1 1489 aa23.37■■□□□ 1.33
SNX29-203ENST00000564111 PLXNC1O60486 1568 aa23.37■■□□□ 1.33
SNX29-203ENST00000564111 CCDC141Q6ZP82 1450 aa23.37■■□□□ 1.33
SNX29-203ENST00000564111 MROH2AA6NES4 1674 aa23.36■■□□□ 1.33
SNX29-203ENST00000564111 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNX29-203ENST00000564111 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
SNX29-203ENST00000564111 APLP2Q06481 763 aa23.35■■□□□ 1.33
SNX29-203ENST00000564111 PREX1Q8TCU6 1659 aa23.34■■□□□ 1.33
SNX29-203ENST00000564111 ILDR1Q86SU0 546 aaPredicted RBP23.34■■□□□ 1.33
SNX29-203ENST00000564111 A2MP01023 1474 aa23.34■■□□□ 1.33
SNX29-203ENST00000564111 MIA2Q96PC5 1412 aa23.33■■□□□ 1.33
SNX29-203ENST00000564111 MLECQ14165 292 aa23.32■■□□□ 1.32
SNX29-203ENST00000564111 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
SNX29-203ENST00000564111 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
SNX29-203ENST00000564111 LMTK3Q96Q04 1460 aa23.29■■□□□ 1.32
SNX29-203ENST00000564111 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
SNX29-203ENST00000564111 MAST1Q9Y2H9 1570 aa23.29■■□□□ 1.32
SNX29-203ENST00000564111 C3P01024 1663 aa23.28■■□□□ 1.32
SNX29-203ENST00000564111 SETD1BQ9UPS6 1966 aaKnown RBP23.26■■□□□ 1.31
SNX29-203ENST00000564111 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
SNX29-203ENST00000564111 ZNF644Q9H582 1327 aaPredicted RBP23.23■■□□□ 1.31
SNX29-203ENST00000564111 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.3
SNX29-203ENST00000564111 NPATQ14207 1427 aa23.2■■□□□ 1.3
SNX29-203ENST00000564111 TSPY4P0CV99 314 aa23.19■■□□□ 1.3
SNX29-203ENST00000564111 TSPY10P0CW01 314 aa23.19■■□□□ 1.3
SNX29-203ENST00000564111 UHRF1BP1Q6BDS2 1440 aa23.18■■□□□ 1.3
SNX29-203ENST00000564111 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
SNX29-203ENST00000564111 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
SNX29-203ENST00000564111 EIF2AK4Q9P2K8 1649 aaKnown RBP23.18■■□□□ 1.3
SNX29-203ENST00000564111 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
SNX29-203ENST00000564111 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
SNX29-203ENST00000564111 SHANK2Q9UPX8 1470 aa23.17■■□□□ 1.3
SNX29-203ENST00000564111 TCOF1Q13428 1488 aaKnown RBP23.13■■□□□ 1.29
SNX29-203ENST00000564111 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
SNX29-203ENST00000564111 ZC3H13Q5T200 1668 aaKnown RBP23.11■■□□□ 1.29
SNX29-203ENST00000564111 KDM5DQ9BY66 1539 aa23.11■■□□□ 1.29
SNX29-203ENST00000564111 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
SNX29-203ENST00000564111 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
SNX29-203ENST00000564111 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
SNX29-203ENST00000564111 FGD6Q6ZV73 1430 aa23.1■■□□□ 1.29
SNX29-203ENST00000564111 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
SNX29-203ENST00000564111 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms