RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 CDC42BPAQ5VT25 1732 aa31.68■■■□□ 2.66
CMTM3-207ENST00000564060 ZMYM4Q5VZL5 1548 aa31.65■■■□□ 2.66
CMTM3-207ENST00000564060 MTUS2Q5JR59 1369 aa31.64■■■□□ 2.66
CMTM3-207ENST00000564060 VPS8Q8N3P4 1428 aa31.63■■■□□ 2.65
CMTM3-207ENST00000564060 SCAPERQ9BY12 1400 aa31.63■■■□□ 2.65
CMTM3-207ENST00000564060 EHBP1L1Q8N3D4 1523 aa31.63■■■□□ 2.65
CMTM3-207ENST00000564060 KDM4FA0A1W2PPD8 638 aa31.62■■■□□ 2.65
CMTM3-207ENST00000564060 ARHGEF40Q8TER5 1519 aa31.61■■■□□ 2.65
CMTM3-207ENST00000564060 POGZQ7Z3K3 1410 aa31.6■■■□□ 2.65
CMTM3-207ENST00000564060 MAGI2Q86UL8 1455 aa31.58■■■□□ 2.65
CMTM3-207ENST00000564060 ZNF518AQ6AHZ1 1483 aa31.54■■■□□ 2.64
CMTM3-207ENST00000564060 ZFYVE16Q7Z3T8 1539 aa31.54■■■□□ 2.64
CMTM3-207ENST00000564060 TIAM1Q13009 1591 aa31.53■■■□□ 2.64
CMTM3-207ENST00000564060 ITSN2Q9NZM3 1697 aa31.52■■■□□ 2.64
CMTM3-207ENST00000564060 ABCC1P33527 1531 aa31.52■■■□□ 2.64
CMTM3-207ENST00000564060 GPATCH8Q9UKJ3 1502 aaKnown RBP31.5■■■□□ 2.63
CMTM3-207ENST00000564060 SUPT6HQ7KZ85 1726 aaKnown RBP31.49■■■□□ 2.63
CMTM3-207ENST00000564060 KDM5CP41229 1560 aa31.48■■■□□ 2.63
CMTM3-207ENST00000564060 CCNB3Q8WWL7 1395 aa31.48■■■□□ 2.63
CMTM3-207ENST00000564060 HECW2Q9P2P5 1572 aa31.44■■■□□ 2.62
CMTM3-207ENST00000564060 MAP3K1Q13233 1512 aa31.44■■■□□ 2.62
CMTM3-207ENST00000564060 SAMD9LQ8IVG5 1584 aa31.43■■■□□ 2.62
CMTM3-207ENST00000564060 BCORL1Q5H9F3 1711 aa31.43■■■□□ 2.62
CMTM3-207ENST00000564060 YEATS2Q9ULM3 1422 aa31.41■■■□□ 2.62
CMTM3-207ENST00000564060 PLEKHH2Q8IVE3 1493 aa31.4■■■□□ 2.62
CMTM3-207ENST00000564060 ADAMTSL3P82987 1691 aa31.39■■■□□ 2.62
CMTM3-207ENST00000564060 CFDP1Q9UEE9 299 aaPredicted RBP31.39■■■□□ 2.62
CMTM3-207ENST00000564060 ARID4BQ4LE39 1312 aaPredicted RBP31.38■■■□□ 2.61
CMTM3-207ENST00000564060 ARHGEF12Q9NZN5 1544 aa31.37■■■□□ 2.61
CMTM3-207ENST00000564060 LRRC9Q6ZRR7 1453 aa31.36■■■□□ 2.61
CMTM3-207ENST00000564060 ZNF777Q9ULD5 760 aaPredicted RBP31.36■■■□□ 2.61
CMTM3-207ENST00000564060 SYCP2Q9BX26 1530 aa31.35■■■□□ 2.61
CMTM3-207ENST00000564060 NCOA2Q15596 1464 aa31.35■■■□□ 2.61
CMTM3-207ENST00000564060 AFAP1Q8N556 730 aa31.35■■■□□ 2.61
CMTM3-207ENST00000564060 ATP10AO60312 1499 aa31.34■■■□□ 2.61
CMTM3-207ENST00000564060 MLH3Q9UHC1 1453 aa31.34■■■□□ 2.61
CMTM3-207ENST00000564060 C9orf84Q5VXU9 1444 aa31.34■■■□□ 2.61
CMTM3-207ENST00000564060 KIAA1107Q9UPP5 1409 aa31.33■■■□□ 2.61
CMTM3-207ENST00000564060 TRAPPC8Q9Y2L5 1435 aa31.33■■■□□ 2.61
CMTM3-207ENST00000564060 MYT1LQ9UL68 1186 aa31.31■■■□□ 2.6
CMTM3-207ENST00000564060 SIGLEC1Q9BZZ2 1709 aa31.3■■■□□ 2.6
CMTM3-207ENST00000564060 DIP2CQ9Y2E4 1556 aa31.3■■■□□ 2.6
CMTM3-207ENST00000564060 APLP2Q06481 763 aa31.29■■■□□ 2.6
CMTM3-207ENST00000564060 ABCA6Q8N139 1617 aa31.28■■■□□ 2.6
CMTM3-207ENST00000564060 KIDINS220Q9ULH0 1771 aa31.28■■■□□ 2.6
CMTM3-207ENST00000564060 REREQ9P2R6 1566 aa31.28■■■□□ 2.6
CMTM3-207ENST00000564060 MADDQ8WXG6 1647 aa31.27■■■□□ 2.6
CMTM3-207ENST00000564060 FER1L4A9Z1Z3 1794 aa31.21■■■□□ 2.59
CMTM3-207ENST00000564060 HNRNPMP52272 730 aaKnown RBP eCLIP31.21■■■□□ 2.59
CMTM3-207ENST00000564060 RIMS1Q86UR5 1692 aaKnown RBP31.21■■■□□ 2.59
CMTM3-207ENST00000564060 PTPRMP28827 1452 aa31.2■■■□□ 2.58
CMTM3-207ENST00000564060 INO80Q9ULG1 1556 aaPredicted RBP31.19■■■□□ 2.58
CMTM3-207ENST00000564060 ATP7AQ04656 1500 aa31.19■■■□□ 2.58
CMTM3-207ENST00000564060 SPAG9O60271 1321 aaKnown RBP31.18■■■□□ 2.58
CMTM3-207ENST00000564060 CAMSAP2Q08AD1 1489 aa31.16■■■□□ 2.58
CMTM3-207ENST00000564060 KANK4Q5T7N3 995 aaPredicted RBP31.16■■■□□ 2.58
CMTM3-207ENST00000564060 MBD5Q9P267 1494 aa31.14■■■□□ 2.57
CMTM3-207ENST00000564060 AGLP35573 1532 aa31.14■■■□□ 2.57
CMTM3-207ENST00000564060 ZNF644Q9H582 1327 aaPredicted RBP31.13■■■□□ 2.57
CMTM3-207ENST00000564060 ADGBQ8N7X0 1667 aa31.1■■■□□ 2.57
CMTM3-207ENST00000564060 MLECQ14165 292 aa31.1■■■□□ 2.57
CMTM3-207ENST00000564060 CCDC141Q6ZP82 1450 aa31.09■■■□□ 2.57
CMTM3-207ENST00000564060 MYOM3Q5VTT5 1437 aa31.09■■■□□ 2.57
CMTM3-207ENST00000564060 RSPH4AQ5TD94 716 aa31.09■■■□□ 2.57
CMTM3-207ENST00000564060 ARHGEF5Q12774 1597 aa31.09■■■□□ 2.57
CMTM3-207ENST00000564060 MIA2Q96PC5 1412 aa31.08■■■□□ 2.57
CMTM3-207ENST00000564060 RTEL1-TNFRSF6BF6WH68 1400 aa31.06■■■□□ 2.56
CMTM3-207ENST00000564060 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
CMTM3-207ENST00000564060 A2MP01023 1474 aa31.01■■■□□ 2.55
CMTM3-207ENST00000564060 PTPN23Q9H3S7 1636 aa30.95■■■□□ 2.54
CMTM3-207ENST00000564060 MAST1Q9Y2H9 1570 aa30.93■■■□□ 2.54
CMTM3-207ENST00000564060 TSPY4P0CV99 314 aa30.93■■■□□ 2.54
CMTM3-207ENST00000564060 TSPY10P0CW01 314 aa30.93■■■□□ 2.54
CMTM3-207ENST00000564060 ESF1Q9H501 851 aaKnown RBP30.93■■■□□ 2.54
CMTM3-207ENST00000564060 CNTLNQ9NXG0 1405 aa30.9■■■□□ 2.54
CMTM3-207ENST00000564060 MROH2AA6NES4 1674 aa30.89■■■□□ 2.54
CMTM3-207ENST00000564060 CROCC2H7BZ55 1655 aa30.87■■■□□ 2.53
CMTM3-207ENST00000564060 C3P01024 1663 aa30.87■■■□□ 2.53
CMTM3-207ENST00000564060 FGD6Q6ZV73 1430 aa30.87■■■□□ 2.53
CMTM3-207ENST00000564060 DHX29Q7Z478 1369 aaKnown RBP30.85■■■□□ 2.53
CMTM3-207ENST00000564060 PLPPR3Q6T4P5 718 aa30.85■■■□□ 2.53
CMTM3-207ENST00000564060 SETD1BQ9UPS6 1966 aaKnown RBP30.85■■■□□ 2.53
CMTM3-207ENST00000564060 PREX1Q8TCU6 1659 aa30.84■■■□□ 2.53
CMTM3-207ENST00000564060 TCOF1Q13428 1488 aaKnown RBP30.83■■■□□ 2.53
CMTM3-207ENST00000564060 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
CMTM3-207ENST00000564060 SHANK2Q9UPX8 1470 aa30.81■■■□□ 2.52
CMTM3-207ENST00000564060 DNMT1P26358 1616 aaKnown RBP30.8■■■□□ 2.52
CMTM3-207ENST00000564060 CLTCQ00610 1675 aaKnown RBP30.8■■■□□ 2.52
CMTM3-207ENST00000564060 PPP6R1Q9UPN7 881 aa30.78■■■□□ 2.52
CMTM3-207ENST00000564060 FAM135AQ9P2D6 1515 aa30.76■■■□□ 2.51
CMTM3-207ENST00000564060 GGT6Q6P531 493 aa30.75■■■□□ 2.51
CMTM3-207ENST00000564060 EIF2AK4Q9P2K8 1649 aaKnown RBP30.75■■■□□ 2.51
CMTM3-207ENST00000564060 CEBPAP49715 358 aaPredicted RBP30.74■■■□□ 2.51
CMTM3-207ENST00000564060 DAPK1P53355 1430 aa30.73■■■□□ 2.51
CMTM3-207ENST00000564060 ABCC5O15440 1437 aa30.72■■■□□ 2.51
CMTM3-207ENST00000564060 DUOX2Q9NRD8 1548 aa30.7■■■□□ 2.51
CMTM3-207ENST00000564060 KIF3BO15066 747 aa30.7■■■□□ 2.51
CMTM3-207ENST00000564060 UHRF1BP1Q6BDS2 1440 aa30.68■■■□□ 2.5
CMTM3-207ENST00000564060 RNF17Q9BXT8 1623 aaKnown RBP30.68■■■□□ 2.5
CMTM3-207ENST00000564060 ZMYM3Q14202 1370 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms