RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
LPCAT4-204ENST00000563240 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
LPCAT4-204ENST00000563240 ARHGEF40Q8TER5 1519 aa24.5■■□□□ 1.51
LPCAT4-204ENST00000563240 AFAP1Q8N556 730 aa24.49■■□□□ 1.51
LPCAT4-204ENST00000563240 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
LPCAT4-204ENST00000563240 CEP162Q5TB80 1403 aa24.48■■□□□ 1.51
LPCAT4-204ENST00000563240 ZFYVE16Q7Z3T8 1539 aa24.48■■□□□ 1.51
LPCAT4-204ENST00000563240 ZMYM4Q5VZL5 1548 aa24.47■■□□□ 1.51
LPCAT4-204ENST00000563240 MLECQ14165 292 aa24.47■■□□□ 1.51
LPCAT4-204ENST00000563240 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.5
LPCAT4-204ENST00000563240 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.5
LPCAT4-204ENST00000563240 ADAMTSL3P82987 1691 aa24.44■■□□□ 1.5
LPCAT4-204ENST00000563240 PLPPR3Q6T4P5 718 aa24.44■■□□□ 1.5
LPCAT4-204ENST00000563240 PTPRMP28827 1452 aa24.43■■□□□ 1.5
LPCAT4-204ENST00000563240 BCORL1Q5H9F3 1711 aa24.42■■□□□ 1.5
LPCAT4-204ENST00000563240 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
LPCAT4-204ENST00000563240 HECW2Q9P2P5 1572 aa24.4■■□□□ 1.5
LPCAT4-204ENST00000563240 ZNF518AQ6AHZ1 1483 aa24.39■■□□□ 1.5
LPCAT4-204ENST00000563240 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
LPCAT4-204ENST00000563240 MADDQ8WXG6 1647 aa24.39■■□□□ 1.49
LPCAT4-204ENST00000563240 ATP10AO60312 1499 aa24.38■■□□□ 1.49
LPCAT4-204ENST00000563240 PREX2Q70Z35 1606 aa24.37■■□□□ 1.49
LPCAT4-204ENST00000563240 TRAPPC8Q9Y2L5 1435 aa24.36■■□□□ 1.49
LPCAT4-204ENST00000563240 ARHGEF12Q9NZN5 1544 aa24.36■■□□□ 1.49
LPCAT4-204ENST00000563240 SIGLEC1Q9BZZ2 1709 aa24.35■■□□□ 1.49
LPCAT4-204ENST00000563240 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
LPCAT4-204ENST00000563240 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
LPCAT4-204ENST00000563240 C9orf84Q5VXU9 1444 aa24.34■■□□□ 1.49
LPCAT4-204ENST00000563240 CCNB3Q8WWL7 1395 aa24.33■■□□□ 1.49
LPCAT4-204ENST00000563240 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
LPCAT4-204ENST00000563240 ABCC1P33527 1531 aa24.32■■□□□ 1.48
LPCAT4-204ENST00000563240 HNRNPMP52272 730 aaKnown RBP eCLIP24.32■■□□□ 1.48
LPCAT4-204ENST00000563240 KDM5CP41229 1560 aa24.3■■□□□ 1.48
LPCAT4-204ENST00000563240 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
LPCAT4-204ENST00000563240 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
LPCAT4-204ENST00000563240 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
LPCAT4-204ENST00000563240 ITSN2Q9NZM3 1697 aa24.25■■□□□ 1.47
LPCAT4-204ENST00000563240 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
LPCAT4-204ENST00000563240 DIP2CQ9Y2E4 1556 aa24.24■■□□□ 1.47
LPCAT4-204ENST00000563240 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
LPCAT4-204ENST00000563240 EHBP1L1Q8N3D4 1523 aa24.22■■□□□ 1.47
LPCAT4-204ENST00000563240 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
LPCAT4-204ENST00000563240 CEBPAP49715 358 aaPredicted RBP24.21■■□□□ 1.47
LPCAT4-204ENST00000563240 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
LPCAT4-204ENST00000563240 VPS8Q8N3P4 1428 aa24.19■■□□□ 1.46
LPCAT4-204ENST00000563240 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
LPCAT4-204ENST00000563240 FER1L4A9Z1Z3 1794 aa24.17■■□□□ 1.46
LPCAT4-204ENST00000563240 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
LPCAT4-204ENST00000563240 PLEKHH2Q8IVE3 1493 aa24.16■■□□□ 1.46
LPCAT4-204ENST00000563240 HSPA2P54652 639 aa24.16■■□□□ 1.46
LPCAT4-204ENST00000563240 KIDINS220Q9ULH0 1771 aa24.16■■□□□ 1.46
LPCAT4-204ENST00000563240 ESF1Q9H501 851 aaKnown RBP24.15■■□□□ 1.46
LPCAT4-204ENST00000563240 NCOA2Q15596 1464 aa24.14■■□□□ 1.46
LPCAT4-204ENST00000563240 LMTK3Q96Q04 1460 aa24.14■■□□□ 1.46
LPCAT4-204ENST00000563240 REREQ9P2R6 1566 aa24.12■■□□□ 1.45
LPCAT4-204ENST00000563240 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
LPCAT4-204ENST00000563240 AGLP35573 1532 aa24.09■■□□□ 1.45
LPCAT4-204ENST00000563240 ATP7AQ04656 1500 aa24.08■■□□□ 1.45
LPCAT4-204ENST00000563240 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
LPCAT4-204ENST00000563240 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
LPCAT4-204ENST00000563240 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
LPCAT4-204ENST00000563240 ILDR1Q86SU0 546 aaPredicted RBP24.04■■□□□ 1.44
LPCAT4-204ENST00000563240 A2MP01023 1474 aa24.02■■□□□ 1.44
LPCAT4-204ENST00000563240 APLP2Q06481 763 aa24.02■■□□□ 1.44
LPCAT4-204ENST00000563240 GGT6Q6P531 493 aa24.02■■□□□ 1.44
LPCAT4-204ENST00000563240 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
LPCAT4-204ENST00000563240 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
LPCAT4-204ENST00000563240 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
LPCAT4-204ENST00000563240 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
LPCAT4-204ENST00000563240 MAP3K1Q13233 1512 aa23.95■■□□□ 1.43
LPCAT4-204ENST00000563240 CNTLNQ9NXG0 1405 aa23.95■■□□□ 1.42
LPCAT4-204ENST00000563240 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
LPCAT4-204ENST00000563240 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
LPCAT4-204ENST00000563240 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
LPCAT4-204ENST00000563240 UHRF1BP1Q6BDS2 1440 aa23.93■■□□□ 1.42
LPCAT4-204ENST00000563240 ZMYM3Q14202 1370 aa23.93■■□□□ 1.42
LPCAT4-204ENST00000563240 C3P01024 1663 aa23.93■■□□□ 1.42
LPCAT4-204ENST00000563240 PLXNC1O60486 1568 aa23.92■■□□□ 1.42
LPCAT4-204ENST00000563240 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
LPCAT4-204ENST00000563240 KIF3BO15066 747 aa23.91■■□□□ 1.42
LPCAT4-204ENST00000563240 PREX1Q8TCU6 1659 aa23.91■■□□□ 1.42
LPCAT4-204ENST00000563240 ADGBQ8N7X0 1667 aa23.89■■□□□ 1.41
LPCAT4-204ENST00000563240 MYOM3Q5VTT5 1437 aa23.88■■□□□ 1.41
LPCAT4-204ENST00000563240 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
LPCAT4-204ENST00000563240 SETD1BQ9UPS6 1966 aaKnown RBP23.84■■□□□ 1.41
LPCAT4-204ENST00000563240 CLTCQ00610 1675 aaKnown RBP23.84■■□□□ 1.41
LPCAT4-204ENST00000563240 ARHGEF5Q12774 1597 aa23.84■■□□□ 1.41
LPCAT4-204ENST00000563240 PPP6R1Q9UPN7 881 aa23.84■■□□□ 1.41
LPCAT4-204ENST00000563240 NPATQ14207 1427 aa23.8■■□□□ 1.4
LPCAT4-204ENST00000563240 MROH2AA6NES4 1674 aa23.79■■□□□ 1.4
LPCAT4-204ENST00000563240 WASHC2CQ9Y4E1 1318 aa23.78■■□□□ 1.4
LPCAT4-204ENST00000563240 PTPRKQ15262 1439 aa23.77■■□□□ 1.4
LPCAT4-204ENST00000563240 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
LPCAT4-204ENST00000563240 FBXO41Q8TF61 875 aa23.76■■□□□ 1.39
LPCAT4-204ENST00000563240 FBXO31Q5XUX0 539 aaPredicted RBP23.75■■□□□ 1.39
LPCAT4-204ENST00000563240 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
LPCAT4-204ENST00000563240 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
LPCAT4-204ENST00000563240 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
LPCAT4-204ENST00000563240 ABCC5O15440 1437 aa23.71■■□□□ 1.39
LPCAT4-204ENST00000563240 CERKQ8TCT0 537 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms