RNA–Protein interactions for RNA: ENST00000562330.5

TAF1C-206, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 3

Gene TAF1C, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-206	ENST00000562330	LOC105371045	A0A1W2PR82	267 aa		29.53	■■■□□ 2.32
TAF1C-206	ENST00000562330	POGZ	Q7Z3K3	1410 aa		29.53	■■■□□ 2.32
TAF1C-206	ENST00000562330	ZMYM4	Q5VZL5	1548 aa		29.52	■■■□□ 2.32
TAF1C-206	ENST00000562330	ARID4B	Q4LE39	1312 aa	Predicted RBP	29.49	■■■□□ 2.31
TAF1C-206	ENST00000562330	YEATS2	Q9ULM3	1422 aa		29.47	■■■□□ 2.31
TAF1C-206	ENST00000562330	ZFYVE16	Q7Z3T8	1539 aa		29.47	■■■□□ 2.31
TAF1C-206	ENST00000562330	CDC42BPB	Q9Y5S2	1711 aa		29.47	■■■□□ 2.31
TAF1C-206	ENST00000562330	PREX2	Q70Z35	1606 aa		29.45	■■■□□ 2.31
TAF1C-206	ENST00000562330	MAGI2	Q86UL8	1455 aa		29.45	■■■□□ 2.31
TAF1C-206	ENST00000562330	ADAMTSL3	P82987	1691 aa		29.41	■■■□□ 2.3
TAF1C-206	ENST00000562330	BCORL1	Q5H9F3	1711 aa		29.4	■■■□□ 2.3
TAF1C-206	ENST00000562330	CDC42BPA	Q5VT25	1732 aa		29.4	■■■□□ 2.3
TAF1C-206	ENST00000562330	AFAP1	Q8N556	730 aa		29.39	■■■□□ 2.3
TAF1C-206	ENST00000562330	ZNF518A	Q6AHZ1	1483 aa		29.39	■■■□□ 2.3
TAF1C-206	ENST00000562330	MTUS2	Q5JR59	1369 aa		29.38	■■■□□ 2.29
TAF1C-206	ENST00000562330	SIGLEC1	Q9BZZ2	1709 aa		29.36	■■■□□ 2.29
TAF1C-206	ENST00000562330	ABCC1	P33527	1531 aa		29.35	■■■□□ 2.29
TAF1C-206	ENST00000562330	ARHGEF12	Q9NZN5	1544 aa		29.34	■■■□□ 2.29
TAF1C-206	ENST00000562330	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.34	■■■□□ 2.29
TAF1C-206	ENST00000562330	KDM5C	P41229	1560 aa		29.34	■■■□□ 2.29
TAF1C-206	ENST00000562330	PTPRM	P28827	1452 aa		29.33	■■■□□ 2.29
TAF1C-206	ENST00000562330	MADD	Q8WXG6	1647 aa		29.33	■■■□□ 2.29
TAF1C-206	ENST00000562330	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.32	■■■□□ 2.28
TAF1C-206	ENST00000562330	ATP10A	O60312	1499 aa		29.31	■■■□□ 2.28
TAF1C-206	ENST00000562330	TRAPPC8	Q9Y2L5	1435 aa		29.31	■■■□□ 2.28
TAF1C-206	ENST00000562330	MYT1L	Q9UL68	1186 aa		29.3	■■■□□ 2.28
TAF1C-206	ENST00000562330	CCNB3	Q8WWL7	1395 aa		29.29	■■■□□ 2.28
TAF1C-206	ENST00000562330	ITSN2	Q9NZM3	1697 aa		29.29	■■■□□ 2.28
TAF1C-206	ENST00000562330	EHBP1L1	Q8N3D4	1523 aa		29.28	■■■□□ 2.28
TAF1C-206	ENST00000562330	C9orf84	Q5VXU9	1444 aa		29.28	■■■□□ 2.28
TAF1C-206	ENST00000562330	HECW2	Q9P2P5	1572 aa		29.27	■■■□□ 2.28
TAF1C-206	ENST00000562330	SAMD9L	Q8IVG5	1584 aa		29.26	■■■□□ 2.28
TAF1C-206	ENST00000562330	MLEC	Q14165	292 aa		29.26	■■■□□ 2.27
TAF1C-206	ENST00000562330	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.25	■■■□□ 2.27
TAF1C-206	ENST00000562330	VPS8	Q8N3P4	1428 aa		29.24	■■■□□ 2.27
TAF1C-206	ENST00000562330	MLH3	Q9UHC1	1453 aa		29.23	■■■□□ 2.27
TAF1C-206	ENST00000562330	RIMS1	Q86UR5	1692 aa	Known RBP	29.23	■■■□□ 2.27
TAF1C-206	ENST00000562330	DIP2C	Q9Y2E4	1556 aa		29.22	■■■□□ 2.27
TAF1C-206	ENST00000562330	SYCP2	Q9BX26	1530 aa		29.21	■■■□□ 2.27
TAF1C-206	ENST00000562330	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.2	■■■□□ 2.26
TAF1C-206	ENST00000562330	TIAM1	Q13009	1591 aa		29.2	■■■□□ 2.26
TAF1C-206	ENST00000562330	ABCA6	Q8N139	1617 aa		29.2	■■■□□ 2.26
TAF1C-206	ENST00000562330	PLPPR3	Q6T4P5	718 aa		29.15	■■■□□ 2.26
TAF1C-206	ENST00000562330	PLEKHH2	Q8IVE3	1493 aa		29.15	■■■□□ 2.26
TAF1C-206	ENST00000562330	KIDINS220	Q9ULH0	1771 aa		29.14	■■■□□ 2.26
TAF1C-206	ENST00000562330	KIAA1107	Q9UPP5	1409 aa		29.14	■■■□□ 2.26
TAF1C-206	ENST00000562330	ZNF644	Q9H582	1327 aa	Predicted RBP	29.13	■■■□□ 2.25
TAF1C-206	ENST00000562330	NCOA2	Q15596	1464 aa		29.12	■■■□□ 2.25
TAF1C-206	ENST00000562330	FER1L4	A9Z1Z3	1794 aa		29.12	■■■□□ 2.25
TAF1C-206	ENST00000562330	RERE	Q9P2R6	1566 aa		29.12	■■■□□ 2.25
TAF1C-206	ENST00000562330	SPAG9	O60271	1321 aa	Known RBP	29.11	■■■□□ 2.25
TAF1C-206	ENST00000562330	SUPT6H	Q7KZ85	1726 aa	Known RBP	29.11	■■■□□ 2.25
TAF1C-206	ENST00000562330	LRRC9	Q6ZRR7	1453 aa		29.07	■■■□□ 2.24
TAF1C-206	ENST00000562330	AGL	P35573	1532 aa		29.04	■■■□□ 2.24
TAF1C-206	ENST00000562330	ATP7A	Q04656	1500 aa		29.04	■■■□□ 2.24
TAF1C-206	ENST00000562330	KANK4	Q5T7N3	995 aa	Predicted RBP	29.02	■■■□□ 2.24
TAF1C-206	ENST00000562330	INO80	Q9ULG1	1556 aa	Predicted RBP	29.01	■■■□□ 2.24
TAF1C-206	ENST00000562330	MBD5	Q9P267	1494 aa		29.01	■■■□□ 2.23
TAF1C-206	ENST00000562330	MAP3K1	Q13233	1512 aa		29	■■■□□ 2.23
TAF1C-206	ENST00000562330	LMTK3	Q96Q04	1460 aa		28.99	■■■□□ 2.23
TAF1C-206	ENST00000562330	CEBPA	P49715	358 aa	Predicted RBP	28.98	■■■□□ 2.23
TAF1C-206	ENST00000562330	CAMSAP2	Q08AD1	1489 aa		28.97	■■■□□ 2.23
TAF1C-206	ENST00000562330	A2M	P01023	1474 aa		28.92	■■■□□ 2.22
TAF1C-206	ENST00000562330	ESF1	Q9H501	851 aa	Known RBP	28.91	■■■□□ 2.22
TAF1C-206	ENST00000562330	PLXNC1	O60486	1568 aa		28.9	■■■□□ 2.22
TAF1C-206	ENST00000562330	CCDC141	Q6ZP82	1450 aa		28.9	■■■□□ 2.22
TAF1C-206	ENST00000562330	APLP2	Q06481	763 aa		28.89	■■■□□ 2.22
TAF1C-206	ENST00000562330	HSPA2	P54652	639 aa		28.88	■■■□□ 2.21
TAF1C-206	ENST00000562330	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.87	■■■□□ 2.21
TAF1C-206	ENST00000562330	ADGB	Q8N7X0	1667 aa		28.86	■■■□□ 2.21
TAF1C-206	ENST00000562330	RSPH4A	Q5TD94	716 aa		28.84	■■■□□ 2.21
TAF1C-206	ENST00000562330	C3	P01024	1663 aa		28.83	■■■□□ 2.21
TAF1C-206	ENST00000562330	MYOM3	Q5VTT5	1437 aa		28.83	■■■□□ 2.21
TAF1C-206	ENST00000562330	CNTLN	Q9NXG0	1405 aa		28.82	■■■□□ 2.2
TAF1C-206	ENST00000562330	ARHGEF5	Q12774	1597 aa		28.82	■■■□□ 2.2
TAF1C-206	ENST00000562330	PREX1	Q8TCU6	1659 aa		28.8	■■■□□ 2.2
TAF1C-206	ENST00000562330	GGT6	Q6P531	493 aa		28.8	■■■□□ 2.2
TAF1C-206	ENST00000562330	MIA2	Q96PC5	1412 aa		28.78	■■■□□ 2.2
TAF1C-206	ENST00000562330	DHX29	Q7Z478	1369 aa	Known RBP	28.78	■■■□□ 2.2
TAF1C-206	ENST00000562330	TSPY4	P0CV99	314 aa		28.77	■■■□□ 2.2
TAF1C-206	ENST00000562330	TSPY10	P0CW01	314 aa		28.77	■■■□□ 2.2
TAF1C-206	ENST00000562330	UHRF1BP1	Q6BDS2	1440 aa		28.74	■■■□□ 2.19
TAF1C-206	ENST00000562330	MROH2A	A6NES4	1674 aa		28.74	■■■□□ 2.19
TAF1C-206	ENST00000562330	CLTC	Q00610	1675 aa	Known RBP	28.74	■■■□□ 2.19
TAF1C-206	ENST00000562330	ZMYM3	Q14202	1370 aa		28.73	■■■□□ 2.19
TAF1C-206	ENST00000562330	SETD1B	Q9UPS6	1966 aa	Known RBP	28.7	■■■□□ 2.19
TAF1C-206	ENST00000562330	KIF3B	O15066	747 aa		28.7	■■■□□ 2.18
TAF1C-206	ENST00000562330	MAST1	Q9Y2H9	1570 aa		28.67	■■■□□ 2.18
TAF1C-206	ENST00000562330	PPP6R1	Q9UPN7	881 aa		28.66	■■■□□ 2.18
TAF1C-206	ENST00000562330	PTPN23	Q9H3S7	1636 aa		28.65	■■■□□ 2.18
TAF1C-206	ENST00000562330	NPAT	Q14207	1427 aa		28.64	■■■□□ 2.18
TAF1C-206	ENST00000562330	ILDR1	Q86SU0	546 aa	Predicted RBP	28.63	■■■□□ 2.17
TAF1C-206	ENST00000562330	FGD6	Q6ZV73	1430 aa		28.62	■■■□□ 2.17
TAF1C-206	ENST00000562330	PTPRK	Q15262	1439 aa		28.6	■■■□□ 2.17
TAF1C-206	ENST00000562330	ABCC5	O15440	1437 aa		28.59	■■■□□ 2.17
TAF1C-206	ENST00000562330	TCOF1	Q13428	1488 aa	Known RBP	28.57	■■■□□ 2.16
TAF1C-206	ENST00000562330	KDM5D	Q9BY66	1539 aa		28.56	■■■□□ 2.16
TAF1C-206	ENST00000562330	STRC	Q7RTU9	1775 aa		28.55	■■■□□ 2.16
TAF1C-206	ENST00000562330	WASHC2C	Q9Y4E1	1318 aa		28.54	■■■□□ 2.16
TAF1C-206	ENST00000562330	CROCC2	H7BZ55	1655 aa		28.54	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms