RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 COLQQ9Y215 455 aaPredicted RBP10.4□□□□□ -0.74
CNOT1-203ENST00000562046 POTEFA5A3E0 1075 aa10.39□□□□□ -0.75
CNOT1-203ENST00000562046 PLCG2P16885 1265 aa10.38□□□□□ -0.75
CNOT1-203ENST00000562046 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
CNOT1-203ENST00000562046 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
CNOT1-203ENST00000562046 SP7Q8TDD2 431 aaPredicted RBP10.38□□□□□ -0.75
CNOT1-203ENST00000562046 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
CNOT1-203ENST00000562046 SLC39A7Q92504 469 aa10.37□□□□□ -0.75
CNOT1-203ENST00000562046 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
CNOT1-203ENST00000562046 C7P10643 843 aa10.34□□□□□ -0.75
CNOT1-203ENST00000562046 PPP1R15BQ5SWA1 713 aa10.34□□□□□ -0.75
CNOT1-203ENST00000562046 KIF3CO14782 793 aa10.33□□□□□ -0.76
CNOT1-203ENST00000562046 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
CNOT1-203ENST00000562046 SEC24BO95487 1268 aa10.32□□□□□ -0.76
CNOT1-203ENST00000562046 DSG2Q14126 1118 aa10.32□□□□□ -0.76
CNOT1-203ENST00000562046 FOXK1P85037 733 aa10.31□□□□□ -0.76
CNOT1-203ENST00000562046 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
CNOT1-203ENST00000562046 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
CNOT1-203ENST00000562046 C2orf72A6NCS6 295 aa10.29□□□□□ -0.76
CNOT1-203ENST00000562046 TMC2Q8TDI7 906 aa10.29□□□□□ -0.76
CNOT1-203ENST00000562046 G3V3G9 751 aa10.28□□□□□ -0.76
CNOT1-203ENST00000562046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNOT1-203ENST00000562046 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
CNOT1-203ENST00000562046 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
CNOT1-203ENST00000562046 SEMA3EO15041 775 aa10.26□□□□□ -0.77
CNOT1-203ENST00000562046 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
CNOT1-203ENST00000562046 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
CNOT1-203ENST00000562046 DPYSL4O14531 572 aa10.19□□□□□ -0.78
CNOT1-203ENST00000562046 PDIA6Q15084 440 aa10.17□□□□□ -0.78
CNOT1-203ENST00000562046 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
CNOT1-203ENST00000562046 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
CNOT1-203ENST00000562046 MLLT3P42568 568 aaPredicted RBP10.14□□□□□ -0.79
CNOT1-203ENST00000562046 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
CNOT1-203ENST00000562046 OXER1Q8TDS5 423 aa10.14□□□□□ -0.79
CNOT1-203ENST00000562046 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
CNOT1-203ENST00000562046 POTEJP0CG39 1038 aa10.11□□□□□ -0.79
CNOT1-203ENST00000562046 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
CNOT1-203ENST00000562046 MAP3K9P80192 1104 aa10.09□□□□□ -0.79
CNOT1-203ENST00000562046 ZC3H15Q8WU90 426 aaKnown RBP10.09□□□□□ -0.79
CNOT1-203ENST00000562046 UPF1Q92900 1129 aaKnown RBP eCLIP10.09□□□□□ -0.79
CNOT1-203ENST00000562046 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
CNOT1-203ENST00000562046 PTCD2Q8WV60 388 aaKnown RBP10.08□□□□□ -0.8
CNOT1-203ENST00000562046 SLC34A2O95436 690 aa10.07□□□□□ -0.8
CNOT1-203ENST00000562046 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
CNOT1-203ENST00000562046 PTGER2P43116 358 aa10.04□□□□□ -0.8
CNOT1-203ENST00000562046 ZMYND10O75800 440 aa10.02□□□□□ -0.81
CNOT1-203ENST00000562046 TBC1D12O60347 775 aa10.01□□□□□ -0.81
CNOT1-203ENST00000562046 EVI5O60447 810 aa10.01□□□□□ -0.81
CNOT1-203ENST00000562046 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-203ENST00000562046 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
CNOT1-203ENST00000562046 OSBPP22059 807 aa9.99□□□□□ -0.81
CNOT1-203ENST00000562046 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
CNOT1-203ENST00000562046 GPR37O15354 613 aa9.97□□□□□ -0.81
CNOT1-203ENST00000562046 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
CNOT1-203ENST00000562046 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
CNOT1-203ENST00000562046 DDX12PQ92771 950 aa9.96□□□□□ -0.82
CNOT1-203ENST00000562046 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.82
CNOT1-203ENST00000562046 HOXB3P14651 431 aaPredicted RBP9.95□□□□□ -0.82
CNOT1-203ENST00000562046 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
CNOT1-203ENST00000562046 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
CNOT1-203ENST00000562046 MAMSTRQ6ZN01 415 aa9.93□□□□□ -0.82
CNOT1-203ENST00000562046 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
CNOT1-203ENST00000562046 SCUBE2Q9NQ36 999 aa9.91□□□□□ -0.82
CNOT1-203ENST00000562046 ZNF316A6NFI3 1004 aaPredicted RBP9.9□□□□□ -0.82
CNOT1-203ENST00000562046 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
CNOT1-203ENST00000562046 PHF14O94880 888 aa9.88□□□□□ -0.83
CNOT1-203ENST00000562046 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
CNOT1-203ENST00000562046 PCDHGA10Q9Y5H3 936 aa9.88□□□□□ -0.83
CNOT1-203ENST00000562046 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
CNOT1-203ENST00000562046 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
CNOT1-203ENST00000562046 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
CNOT1-203ENST00000562046 KHSRPQ92945 711 aaKnown RBP eCLIP9.86□□□□□ -0.831e-9■■■□□ 14.7
CNOT1-203ENST00000562046 EPAS1Q99814 870 aa9.86□□□□□ -0.83
CNOT1-203ENST00000562046 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
CNOT1-203ENST00000562046 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
CNOT1-203ENST00000562046 PTGDRQ13258 359 aa9.84□□□□□ -0.83
CNOT1-203ENST00000562046 AK7Q96M32 723 aa9.84□□□□□ -0.83
CNOT1-203ENST00000562046 NUDT7P0C024 238 aa9.83□□□□□ -0.84
CNOT1-203ENST00000562046 FOSBP53539 338 aa9.83□□□□□ -0.84
CNOT1-203ENST00000562046 OTUD5Q96G74 571 aa9.83□□□□□ -0.84
CNOT1-203ENST00000562046 JPH4Q96JJ6 628 aa9.83□□□□□ -0.84
CNOT1-203ENST00000562046 GNPATO15228 680 aa9.82□□□□□ -0.84
CNOT1-203ENST00000562046 FCHSD2O94868 740 aa9.82□□□□□ -0.84
CNOT1-203ENST00000562046 HIC1Q14526 733 aa9.82□□□□□ -0.84
CNOT1-203ENST00000562046 TYW1BQ6NUM6 668 aa9.82□□□□□ -0.84
CNOT1-203ENST00000562046 NPDC1Q9NQX5 325 aaPredicted RBP9.82□□□□□ -0.84
CNOT1-203ENST00000562046 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
CNOT1-203ENST00000562046 FECHP22830 423 aa9.81□□□□□ -0.84
CNOT1-203ENST00000562046 KRI1Q8N9T8 703 aaKnown RBP9.81□□□□□ -0.84
CNOT1-203ENST00000562046 CDHR5Q9HBB8 845 aa9.81□□□□□ -0.84
CNOT1-203ENST00000562046 MINK1Q8N4C8 1332 aaPredicted RBP9.8□□□□□ -0.84
CNOT1-203ENST00000562046 TRIM66O15016 1216 aa9.79□□□□□ -0.84
CNOT1-203ENST00000562046 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
CNOT1-203ENST00000562046 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
CNOT1-203ENST00000562046 IRF6O14896 467 aa9.78□□□□□ -0.84
CNOT1-203ENST00000562046 MAP3K7O43318 606 aa9.78□□□□□ -0.84
CNOT1-203ENST00000562046 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
CNOT1-203ENST00000562046 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
CNOT1-203ENST00000562046 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
CNOT1-203ENST00000562046 SNPHO15079 494 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms