RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
CMTM4-203ENST00000561680 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
CMTM4-203ENST00000561680 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
CMTM4-203ENST00000561680 PLCH2O75038 1416 aa19.5■□□□□ 0.71
CMTM4-203ENST00000561680 SAMD9LQ8IVG5 1584 aa19.49■□□□□ 0.71
CMTM4-203ENST00000561680 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
CMTM4-203ENST00000561680 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
CMTM4-203ENST00000561680 CAMSAP2Q08AD1 1489 aa19.46■□□□□ 0.71
CMTM4-203ENST00000561680 CROCC2H7BZ55 1655 aa19.46■□□□□ 0.71
CMTM4-203ENST00000561680 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
CMTM4-203ENST00000561680 FANCAO15360 1455 aa19.43■□□□□ 0.7
CMTM4-203ENST00000561680 ABCC1P33527 1531 aa19.43■□□□□ 0.7
CMTM4-203ENST00000561680 DNMT1P26358 1616 aaKnown RBP19.42■□□□□ 0.7
CMTM4-203ENST00000561680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.7
CMTM4-203ENST00000561680 CFDP1Q9UEE9 299 aaPredicted RBP19.41■□□□□ 0.7
CMTM4-203ENST00000561680 NEO1Q92859 1461 aa19.4■□□□□ 0.7
CMTM4-203ENST00000561680 SYCP2Q9BX26 1530 aa19.4■□□□□ 0.7
CMTM4-203ENST00000561680 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
CMTM4-203ENST00000561680 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
CMTM4-203ENST00000561680 PLEKHH2Q8IVE3 1493 aa19.38■□□□□ 0.69
CMTM4-203ENST00000561680 ADGBQ8N7X0 1667 aa19.36■□□□□ 0.69
CMTM4-203ENST00000561680 EFCAB2Q5VUJ9 269 aa19.36■□□□□ 0.69
CMTM4-203ENST00000561680 RICTORQ6R327 1708 aa19.36■□□□□ 0.69
CMTM4-203ENST00000561680 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
CMTM4-203ENST00000561680 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
CMTM4-203ENST00000561680 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
CMTM4-203ENST00000561680 ADGRL1O94910 1474 aa19.34■□□□□ 0.69
CMTM4-203ENST00000561680 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
CMTM4-203ENST00000561680 ARHGEF12Q9NZN5 1544 aa19.33■□□□□ 0.68
CMTM4-203ENST00000561680 MBD5Q9P267 1494 aa19.33■□□□□ 0.68
CMTM4-203ENST00000561680 FAM50AQ14320 339 aaKnown RBP19.32■□□□□ 0.68
CMTM4-203ENST00000561680 ZNF777Q9ULD5 760 aaPredicted RBP19.32■□□□□ 0.68
CMTM4-203ENST00000561680 CCDC141Q6ZP82 1450 aa19.3■□□□□ 0.68
CMTM4-203ENST00000561680 DAPK1P53355 1430 aa19.3■□□□□ 0.68
CMTM4-203ENST00000561680 MAST1Q9Y2H9 1570 aa19.3■□□□□ 0.68
CMTM4-203ENST00000561680 SHANK2Q9UPX8 1470 aa19.29■□□□□ 0.68
CMTM4-203ENST00000561680 FRMPD1Q5SYB0 1578 aa19.28■□□□□ 0.68
CMTM4-203ENST00000561680 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
CMTM4-203ENST00000561680 KDM5CP41229 1560 aa19.27■□□□□ 0.68
CMTM4-203ENST00000561680 ABCC5O15440 1437 aa19.27■□□□□ 0.68
CMTM4-203ENST00000561680 INO80Q9ULG1 1556 aaPredicted RBP19.27■□□□□ 0.67
CMTM4-203ENST00000561680 SCAPERQ9BY12 1400 aa19.26■□□□□ 0.67
CMTM4-203ENST00000561680 GCC2Q8IWJ2 1684 aa19.26■□□□□ 0.67
CMTM4-203ENST00000561680 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
CMTM4-203ENST00000561680 TRAPPC8Q9Y2L5 1435 aa19.25■□□□□ 0.67
CMTM4-203ENST00000561680 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
CMTM4-203ENST00000561680 PTPRKQ15262 1439 aa19.24■□□□□ 0.67
CMTM4-203ENST00000561680 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
CMTM4-203ENST00000561680 PLXNC1O60486 1568 aa19.23■□□□□ 0.67
CMTM4-203ENST00000561680 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
CMTM4-203ENST00000561680 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
CMTM4-203ENST00000561680 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
CMTM4-203ENST00000561680 ZMYM4Q5VZL5 1548 aa19.22■□□□□ 0.67
CMTM4-203ENST00000561680 ZFYVE16Q7Z3T8 1539 aa19.22■□□□□ 0.67
CMTM4-203ENST00000561680 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
CMTM4-203ENST00000561680 RSPH4AQ5TD94 716 aa19.21■□□□□ 0.67
CMTM4-203ENST00000561680 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
CMTM4-203ENST00000561680 KDM6BO15054 1643 aa19.2■□□□□ 0.66
CMTM4-203ENST00000561680 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
CMTM4-203ENST00000561680 ITGAEP38570 1179 aa19.17■□□□□ 0.66
CMTM4-203ENST00000561680 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
CMTM4-203ENST00000561680 ABCA6Q8N139 1617 aa19.16■□□□□ 0.66
CMTM4-203ENST00000561680 ROCK1Q13464 1354 aa19.16■□□□□ 0.66
CMTM4-203ENST00000561680 RTEL1-TNFRSF6BF6WH68 1400 aa19.16■□□□□ 0.66
CMTM4-203ENST00000561680 MLH3Q9UHC1 1453 aa19.15■□□□□ 0.66
CMTM4-203ENST00000561680 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
CMTM4-203ENST00000561680 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
CMTM4-203ENST00000561680 DIP2CQ9Y2E4 1556 aa19.12■□□□□ 0.65
CMTM4-203ENST00000561680 HFM1A2PYH4 1435 aa19.12■□□□□ 0.65
CMTM4-203ENST00000561680 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
CMTM4-203ENST00000561680 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
CMTM4-203ENST00000561680 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
CMTM4-203ENST00000561680 SPAG9O60271 1321 aaKnown RBP19.11■□□□□ 0.65
CMTM4-203ENST00000561680 ARHGEF40Q8TER5 1519 aa19.1■□□□□ 0.65
CMTM4-203ENST00000561680 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
CMTM4-203ENST00000561680 RAPGEF3O95398 923 aa19.1■□□□□ 0.65
CMTM4-203ENST00000561680 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
CMTM4-203ENST00000561680 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
CMTM4-203ENST00000561680 NAIPQ13075 1403 aa19.08■□□□□ 0.65
CMTM4-203ENST00000561680 DUOX2Q9NRD8 1548 aa19.08■□□□□ 0.64
CMTM4-203ENST00000561680 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
CMTM4-203ENST00000561680 BCORL1Q5H9F3 1711 aa19.07■□□□□ 0.64
CMTM4-203ENST00000561680 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
CMTM4-203ENST00000561680 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
CMTM4-203ENST00000561680 SETD5Q9C0A6 1442 aa19.03■□□□□ 0.64
CMTM4-203ENST00000561680 YEATS2Q9ULM3 1422 aa19.03■□□□□ 0.64
CMTM4-203ENST00000561680 RRP7BPQ9NSQ0 103 aa19.03■□□□□ 0.64
CMTM4-203ENST00000561680 SIGLEC1Q9BZZ2 1709 aa19.03■□□□□ 0.64
CMTM4-203ENST00000561680 ERBINQ96RT1 1412 aa19.01■□□□□ 0.63
CMTM4-203ENST00000561680 DEPDC5O75140 1603 aa19.01■□□□□ 0.63
CMTM4-203ENST00000561680 A2MP01023 1474 aa19■□□□□ 0.63
CMTM4-203ENST00000561680 UNC13BO14795 1591 aa19■□□□□ 0.63
CMTM4-203ENST00000561680 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
CMTM4-203ENST00000561680 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
CMTM4-203ENST00000561680 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
CMTM4-203ENST00000561680 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
CMTM4-203ENST00000561680 ATP10AO60312 1499 aa18.97■□□□□ 0.63
CMTM4-203ENST00000561680 DHX29Q7Z478 1369 aaKnown RBP18.95■□□□□ 0.62
CMTM4-203ENST00000561680 MROH1Q8NDA8 1641 aa18.94■□□□□ 0.62
CMTM4-203ENST00000561680 AGLP35573 1532 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms