RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
HERC1-215ENST00000561436 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
HERC1-215ENST00000561436 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
HERC1-215ENST00000561436 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
HERC1-215ENST00000561436 KIF3CO14782 793 aa9.03□□□□□ -0.96
HERC1-215ENST00000561436 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
HERC1-215ENST00000561436 TMC2Q8TDI7 906 aa9.03□□□□□ -0.96
HERC1-215ENST00000561436 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
HERC1-215ENST00000561436 HOXB3P14651 431 aaPredicted RBP9.01□□□□□ -0.97
HERC1-215ENST00000561436 DSG2Q14126 1118 aa9□□□□□ -0.97
HERC1-215ENST00000561436 CRISPLD2Q9H0B8 497 aa8.99□□□□□ -0.97
HERC1-215ENST00000561436 ST18O60284 1047 aa8.98□□□□□ -0.97
HERC1-215ENST00000561436 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
HERC1-215ENST00000561436 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
HERC1-215ENST00000561436 GPHNQ9NQX3 736 aaPredicted RBP8.97□□□□□ -0.97
HERC1-215ENST00000561436 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
HERC1-215ENST00000561436 KHSRPQ92945 711 aaKnown RBP eCLIP8.96□□□□□ -0.98
HERC1-215ENST00000561436 MARVELD3Q96A59 401 aa8.95□□□□□ -0.98
HERC1-215ENST00000561436 HAP1P54257 671 aaPredicted RBP8.93□□□□□ -0.98
HERC1-215ENST00000561436 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
HERC1-215ENST00000561436 PDE4AP27815 886 aa8.92□□□□□ -0.98
HERC1-215ENST00000561436 FOXK1P85037 733 aa8.92□□□□□ -0.98
HERC1-215ENST00000561436 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
HERC1-215ENST00000561436 SNPHO15079 494 aa8.91□□□□□ -0.98
HERC1-215ENST00000561436 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
HERC1-215ENST00000561436 UPF1Q92900 1129 aaKnown RBP eCLIP8.91□□□□□ -0.98
HERC1-215ENST00000561436 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
HERC1-215ENST00000561436 DOK7Q18PE1 504 aa8.9□□□□□ -0.98
HERC1-215ENST00000561436 MFSD10Q14728 455 aa8.87□□□□□ -0.99
HERC1-215ENST00000561436 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
HERC1-215ENST00000561436 POTEMA6NI47 508 aa8.86□□□□□ -0.99
HERC1-215ENST00000561436 GPR153Q6NV75 609 aa8.86□□□□□ -0.99
HERC1-215ENST00000561436 EMILIN3Q9NT22 766 aa8.86□□□□□ -0.99
HERC1-215ENST00000561436 PCDHGA4Q9Y5G9 962 aa8.86□□□□□ -0.99
HERC1-215ENST00000561436 NUDT7P0C024 238 aa8.85□□□□□ -0.99
HERC1-215ENST00000561436 POTEB3A0JP26 581 aa8.84□□□□□ -0.99
HERC1-215ENST00000561436 EMP3P54852 163 aa8.84□□□□□ -0.99
HERC1-215ENST00000561436 POTEBQ6S5H4 581 aa8.84□□□□□ -0.99
HERC1-215ENST00000561436 FAM205CA6NFA0 338 aa8.83□□□□□ -1
HERC1-215ENST00000561436 RIMBP2O15034 1052 aa8.83□□□□□ -1
HERC1-215ENST00000561436 HOXB1P14653 301 aaPredicted RBP8.83□□□□□ -1
HERC1-215ENST00000561436 OXER1Q8TDS5 423 aa8.81□□□□□ -1
HERC1-215ENST00000561436 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
HERC1-215ENST00000561436 SLC34A2O95436 690 aa8.8□□□□□ -1
HERC1-215ENST00000561436 PTCD2Q8WV60 388 aaKnown RBP8.8□□□□□ -1
HERC1-215ENST00000561436 DPYSL4O14531 572 aa8.79□□□□□ -1
HERC1-215ENST00000561436 WDR70Q9NW82 654 aa8.79□□□□□ -1
HERC1-215ENST00000561436 ERBB3P21860 1342 aa8.78□□□□□ -1
HERC1-215ENST00000561436 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
HERC1-215ENST00000561436 HS3ST6Q96QI5 342 aa8.77□□□□□ -1.01
HERC1-215ENST00000561436 ZSWIM6Q9HCJ5 1215 aa8.77□□□□□ -1.01
HERC1-215ENST00000561436 LHX6Q9UPM6 363 aa8.77□□□□□ -1.01
HERC1-215ENST00000561436 CAMK2BQ13554 666 aa8.76□□□□□ -1.01
HERC1-215ENST00000561436 KDM4FA0A1W2PPD8 638 aa8.75□□□□□ -1.01
HERC1-215ENST00000561436 MAP3K9P80192 1104 aa8.75□□□□□ -1.01
HERC1-215ENST00000561436 E2F4Q16254 413 aa8.75□□□□□ -1.01
HERC1-215ENST00000561436 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
HERC1-215ENST00000561436 ZNF316A6NFI3 1004 aaPredicted RBP8.73□□□□□ -1.01
HERC1-215ENST00000561436 EVI5O60447 810 aa8.73□□□□□ -1.01
HERC1-215ENST00000561436 TBC1D12O60347 775 aa8.71□□□□□ -1.02
HERC1-215ENST00000561436 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
HERC1-215ENST00000561436 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
HERC1-215ENST00000561436 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
HERC1-215ENST00000561436 DDX12PQ92771 950 aa8.67□□□□□ -1.02
HERC1-215ENST00000561436 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
HERC1-215ENST00000561436 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
HERC1-215ENST00000561436 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
HERC1-215ENST00000561436 PDIA6Q15084 440 aa8.63□□□□□ -1.03
HERC1-215ENST00000561436 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
HERC1-215ENST00000561436 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
HERC1-215ENST00000561436 FOSBP53539 338 aa8.62□□□□□ -1.03
HERC1-215ENST00000561436 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
HERC1-215ENST00000561436 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
HERC1-215ENST00000561436 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
HERC1-215ENST00000561436 PSEN2P49810 448 aa8.61□□□□□ -1.03
HERC1-215ENST00000561436 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
HERC1-215ENST00000561436 RBM33Q96EV2 1170 aaKnown RBP8.61□□□□□ -1.03
HERC1-215ENST00000561436 ADAM33Q9BZ11 813 aa8.61□□□□□ -1.03
HERC1-215ENST00000561436 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
HERC1-215ENST00000561436 PPP4R3BQ5MIZ7 849 aa8.6□□□□□ -1.03
HERC1-215ENST00000561436 SEMA3EO15041 775 aa8.59□□□□□ -1.03
HERC1-215ENST00000561436 JPH4Q96JJ6 628 aa8.59□□□□□ -1.03
HERC1-215ENST00000561436 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
HERC1-215ENST00000561436 NBR1Q14596 966 aa8.58□□□□□ -1.04
HERC1-215ENST00000561436 DMRTA1Q5VZB9 504 aa8.58□□□□□ -1.04
HERC1-215ENST00000561436 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
HERC1-215ENST00000561436 ARIH1Q9Y4X5 557 aaPredicted RBP8.58□□□□□ -1.04
HERC1-215ENST00000561436 SPDYE16A6NNV3 312 aaPredicted RBP8.56□□□□□ -1.04
HERC1-215ENST00000561436 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
HERC1-215ENST00000561436 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
HERC1-215ENST00000561436 ZDHHC16Q969W1 377 aa8.56□□□□□ -1.04
HERC1-215ENST00000561436 PHF14O94880 888 aa8.54□□□□□ -1.04
HERC1-215ENST00000561436 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
HERC1-215ENST00000561436 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
HERC1-215ENST00000561436 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
HERC1-215ENST00000561436 COL9A1P20849 921 aa8.53□□□□□ -1.04
HERC1-215ENST00000561436 PTGER2P43116 358 aa8.53□□□□□ -1.04
HERC1-215ENST00000561436 ARHGAP33O14559 1287 aa8.52□□□□□ -1.05
HERC1-215ENST00000561436 LSM11P83369 360 aaKnown RBP eCLIP8.52□□□□□ -1.05
HERC1-215ENST00000561436 BCL2L12Q9HB09 334 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms