RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 CLIP1P30622 1438 aa22.85■■□□□ 1.25
USP8-215ENST00000560982 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
USP8-215ENST00000560982 PCF11O94913 1555 aaKnown RBP22.84■■□□□ 1.25
USP8-215ENST00000560982 POGZQ7Z3K3 1410 aa22.84■■□□□ 1.25
USP8-215ENST00000560982 YEATS2Q9ULM3 1422 aa22.83■■□□□ 1.25
USP8-215ENST00000560982 EFCAB2Q5VUJ9 269 aa22.83■■□□□ 1.25
USP8-215ENST00000560982 CASKIN1Q8WXD9 1431 aa22.82■■□□□ 1.24
USP8-215ENST00000560982 RIMS1Q86UR5 1692 aaKnown RBP22.81■■□□□ 1.24
USP8-215ENST00000560982 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
USP8-215ENST00000560982 SIGLEC1Q9BZZ2 1709 aa22.8■■□□□ 1.24
USP8-215ENST00000560982 ARHGAP5Q13017 1502 aa22.8■■□□□ 1.24
USP8-215ENST00000560982 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
USP8-215ENST00000560982 FYCO1Q9BQS8 1478 aa22.74■■□□□ 1.23
USP8-215ENST00000560982 ZNF518AQ6AHZ1 1483 aa22.73■■□□□ 1.23
USP8-215ENST00000560982 ATP10AO60312 1499 aa22.73■■□□□ 1.23
USP8-215ENST00000560982 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
USP8-215ENST00000560982 MLECQ14165 292 aa22.7■■□□□ 1.22
USP8-215ENST00000560982 ILDR1Q86SU0 546 aaPredicted RBP22.7■■□□□ 1.22
USP8-215ENST00000560982 C9orf84Q5VXU9 1444 aa22.7■■□□□ 1.22
USP8-215ENST00000560982 KDM5CP41229 1560 aa22.7■■□□□ 1.22
USP8-215ENST00000560982 FER1L4A9Z1Z3 1794 aa22.7■■□□□ 1.22
USP8-215ENST00000560982 AFAP1Q8N556 730 aa22.68■■□□□ 1.22
USP8-215ENST00000560982 LMTK3Q96Q04 1460 aa22.66■■□□□ 1.22
USP8-215ENST00000560982 CDC42BPAQ5VT25 1732 aa22.66■■□□□ 1.22
USP8-215ENST00000560982 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
USP8-215ENST00000560982 ABCC1P33527 1531 aa22.66■■□□□ 1.22
USP8-215ENST00000560982 ARHGEF12Q9NZN5 1544 aa22.64■■□□□ 1.21
USP8-215ENST00000560982 MYT1LQ9UL68 1186 aa22.64■■□□□ 1.21
USP8-215ENST00000560982 ITSN2Q9NZM3 1697 aa22.64■■□□□ 1.21
USP8-215ENST00000560982 DIP2CQ9Y2E4 1556 aa22.63■■□□□ 1.21
USP8-215ENST00000560982 ABCA6Q8N139 1617 aa22.6■■□□□ 1.21
USP8-215ENST00000560982 MLH3Q9UHC1 1453 aa22.6■■□□□ 1.21
USP8-215ENST00000560982 TRAPPC8Q9Y2L5 1435 aa22.6■■□□□ 1.21
USP8-215ENST00000560982 REREQ9P2R6 1566 aa22.59■■□□□ 1.21
USP8-215ENST00000560982 GPATCH8Q9UKJ3 1502 aaKnown RBP22.55■■□□□ 1.2
USP8-215ENST00000560982 SAMD9LQ8IVG5 1584 aa22.55■■□□□ 1.2
USP8-215ENST00000560982 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
USP8-215ENST00000560982 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
USP8-215ENST00000560982 HSPA2P54652 639 aa22.53■■□□□ 1.2
USP8-215ENST00000560982 SYCP2Q9BX26 1530 aa22.52■■□□□ 1.19
USP8-215ENST00000560982 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
USP8-215ENST00000560982 PREX1Q8TCU6 1659 aa22.5■■□□□ 1.19
USP8-215ENST00000560982 AGLP35573 1532 aa22.5■■□□□ 1.19
USP8-215ENST00000560982 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
USP8-215ENST00000560982 CEBPAP49715 358 aaPredicted RBP22.49■■□□□ 1.19
USP8-215ENST00000560982 CCNB3Q8WWL7 1395 aa22.49■■□□□ 1.19
USP8-215ENST00000560982 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
USP8-215ENST00000560982 HNRNPMP52272 730 aaKnown RBP eCLIP22.45■■□□□ 1.18
USP8-215ENST00000560982 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
USP8-215ENST00000560982 EHBP1L1Q8N3D4 1523 aa22.45■■□□□ 1.18
USP8-215ENST00000560982 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
USP8-215ENST00000560982 C3P01024 1663 aa22.43■■□□□ 1.18
USP8-215ENST00000560982 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
USP8-215ENST00000560982 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
USP8-215ENST00000560982 ESF1Q9H501 851 aaKnown RBP22.42■■□□□ 1.18
USP8-215ENST00000560982 ATP7AQ04656 1500 aa22.41■■□□□ 1.18
USP8-215ENST00000560982 FBXO41Q8TF61 875 aa22.41■■□□□ 1.18
USP8-215ENST00000560982 INO80Q9ULG1 1556 aaPredicted RBP22.41■■□□□ 1.18
USP8-215ENST00000560982 SUPT6HQ7KZ85 1726 aaKnown RBP22.39■■□□□ 1.17
USP8-215ENST00000560982 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.17
USP8-215ENST00000560982 SETD1BQ9UPS6 1966 aaKnown RBP22.37■■□□□ 1.17
USP8-215ENST00000560982 CNTLNQ9NXG0 1405 aa22.36■■□□□ 1.17
USP8-215ENST00000560982 PLXNC1O60486 1568 aa22.34■■□□□ 1.17
USP8-215ENST00000560982 A2MP01023 1474 aa22.34■■□□□ 1.17
USP8-215ENST00000560982 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
USP8-215ENST00000560982 MROH2AA6NES4 1674 aa22.33■■□□□ 1.16
USP8-215ENST00000560982 STRCQ7RTU9 1775 aa22.31■■□□□ 1.16
USP8-215ENST00000560982 ADGBQ8N7X0 1667 aa22.31■■□□□ 1.16
USP8-215ENST00000560982 MBD5Q9P267 1494 aa22.3■■□□□ 1.16
USP8-215ENST00000560982 NCOA2Q15596 1464 aa22.29■■□□□ 1.16
USP8-215ENST00000560982 CLTCQ00610 1675 aaKnown RBP22.28■■□□□ 1.16
USP8-215ENST00000560982 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
USP8-215ENST00000560982 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
USP8-215ENST00000560982 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
USP8-215ENST00000560982 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
USP8-215ENST00000560982 RTEL1-TNFRSF6BF6WH68 1400 aa22.24■■□□□ 1.15
USP8-215ENST00000560982 NPATQ14207 1427 aa22.24■■□□□ 1.15
USP8-215ENST00000560982 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
USP8-215ENST00000560982 GGT6Q6P531 493 aa22.23■■□□□ 1.15
USP8-215ENST00000560982 CERKQ8TCT0 537 aa22.23■■□□□ 1.15
USP8-215ENST00000560982 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
USP8-215ENST00000560982 LRRC9Q6ZRR7 1453 aa22.2■■□□□ 1.14
USP8-215ENST00000560982 DHX29Q7Z478 1369 aaKnown RBP22.18■■□□□ 1.14
USP8-215ENST00000560982 PTPRTO14522 1441 aa22.17■■□□□ 1.14
USP8-215ENST00000560982 RSPH4AQ5TD94 716 aa22.17■■□□□ 1.14
USP8-215ENST00000560982 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
USP8-215ENST00000560982 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
USP8-215ENST00000560982 NCOA1Q15788 1441 aa22.16■■□□□ 1.14
USP8-215ENST00000560982 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
USP8-215ENST00000560982 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
USP8-215ENST00000560982 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
USP8-215ENST00000560982 ZNF142P52746 1687 aaPredicted RBP22.14■■□□□ 1.14
USP8-215ENST00000560982 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
USP8-215ENST00000560982 KIF3BO15066 747 aa22.11■■□□□ 1.13
USP8-215ENST00000560982 CEP170BQ9Y4F5 1589 aaPredicted RBP22.11■■□□□ 1.13
USP8-215ENST00000560982 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
USP8-215ENST00000560982 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
USP8-215ENST00000560982 KANK4Q5T7N3 995 aaPredicted RBP22.1■■□□□ 1.13
USP8-215ENST00000560982 KDM5DQ9BY66 1539 aa22.07■■□□□ 1.12
USP8-215ENST00000560982 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms