RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
TNFAIP2-207ENST00000560562 ADAMTSL3P82987 1691 aa22.73■■□□□ 1.23
TNFAIP2-207ENST00000560562 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
TNFAIP2-207ENST00000560562 BCORL1Q5H9F3 1711 aa22.72■■□□□ 1.23
TNFAIP2-207ENST00000560562 POGZQ7Z3K3 1410 aa22.71■■□□□ 1.23
TNFAIP2-207ENST00000560562 SCAPERQ9BY12 1400 aa22.71■■□□□ 1.23
TNFAIP2-207ENST00000560562 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
TNFAIP2-207ENST00000560562 YEATS2Q9ULM3 1422 aa22.7■■□□□ 1.22
TNFAIP2-207ENST00000560562 ZFYVE16Q7Z3T8 1539 aa22.68■■□□□ 1.22
TNFAIP2-207ENST00000560562 EFCAB2Q5VUJ9 269 aa22.65■■□□□ 1.22
TNFAIP2-207ENST00000560562 MADDQ8WXG6 1647 aa22.65■■□□□ 1.22
TNFAIP2-207ENST00000560562 KDM5CP41229 1560 aa22.63■■□□□ 1.21
TNFAIP2-207ENST00000560562 ITSN2Q9NZM3 1697 aa22.63■■□□□ 1.21
TNFAIP2-207ENST00000560562 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
TNFAIP2-207ENST00000560562 MAGI2Q86UL8 1455 aa22.62■■□□□ 1.21
TNFAIP2-207ENST00000560562 ABCC1P33527 1531 aa22.62■■□□□ 1.21
TNFAIP2-207ENST00000560562 ARHGEF12Q9NZN5 1544 aa22.61■■□□□ 1.21
TNFAIP2-207ENST00000560562 HECW2Q9P2P5 1572 aa22.59■■□□□ 1.21
TNFAIP2-207ENST00000560562 ZNF518AQ6AHZ1 1483 aa22.58■■□□□ 1.21
TNFAIP2-207ENST00000560562 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.2
TNFAIP2-207ENST00000560562 SAMD9LQ8IVG5 1584 aa22.58■■□□□ 1.2
TNFAIP2-207ENST00000560562 PTPRMP28827 1452 aa22.58■■□□□ 1.2
TNFAIP2-207ENST00000560562 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
TNFAIP2-207ENST00000560562 GPATCH8Q9UKJ3 1502 aaKnown RBP22.56■■□□□ 1.2
TNFAIP2-207ENST00000560562 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
TNFAIP2-207ENST00000560562 ABCA6Q8N139 1617 aa22.55■■□□□ 1.2
TNFAIP2-207ENST00000560562 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
TNFAIP2-207ENST00000560562 DIP2CQ9Y2E4 1556 aa22.54■■□□□ 1.2
TNFAIP2-207ENST00000560562 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
TNFAIP2-207ENST00000560562 ATP10AO60312 1499 aa22.52■■□□□ 1.2
TNFAIP2-207ENST00000560562 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
TNFAIP2-207ENST00000560562 TIAM1Q13009 1591 aa22.52■■□□□ 1.2
TNFAIP2-207ENST00000560562 KIDINS220Q9ULH0 1771 aa22.51■■□□□ 1.19
TNFAIP2-207ENST00000560562 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
TNFAIP2-207ENST00000560562 C9orf84Q5VXU9 1444 aa22.5■■□□□ 1.19
TNFAIP2-207ENST00000560562 SYCP2Q9BX26 1530 aa22.5■■□□□ 1.19
TNFAIP2-207ENST00000560562 MLH3Q9UHC1 1453 aa22.48■■□□□ 1.19
TNFAIP2-207ENST00000560562 VPS8Q8N3P4 1428 aa22.46■■□□□ 1.19
TNFAIP2-207ENST00000560562 REREQ9P2R6 1566 aa22.45■■□□□ 1.19
TNFAIP2-207ENST00000560562 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
TNFAIP2-207ENST00000560562 ZNF777Q9ULD5 760 aaPredicted RBP22.44■■□□□ 1.18
TNFAIP2-207ENST00000560562 SUPT6HQ7KZ85 1726 aaKnown RBP22.43■■□□□ 1.18
TNFAIP2-207ENST00000560562 MLECQ14165 292 aa22.42■■□□□ 1.18
TNFAIP2-207ENST00000560562 INO80Q9ULG1 1556 aaPredicted RBP22.4■■□□□ 1.18
TNFAIP2-207ENST00000560562 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.173e-6■□□□□ 9.2
TNFAIP2-207ENST00000560562 CFDP1Q9UEE9 299 aaPredicted RBP22.39■■□□□ 1.17
TNFAIP2-207ENST00000560562 KIAA1107Q9UPP5 1409 aa22.38■■□□□ 1.17
TNFAIP2-207ENST00000560562 NCOA2Q15596 1464 aa22.38■■□□□ 1.17
TNFAIP2-207ENST00000560562 MYT1LQ9UL68 1186 aa22.37■■□□□ 1.17
TNFAIP2-207ENST00000560562 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
TNFAIP2-207ENST00000560562 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
TNFAIP2-207ENST00000560562 PLEKHH2Q8IVE3 1493 aa22.36■■□□□ 1.17
TNFAIP2-207ENST00000560562 AGLP35573 1532 aa22.35■■□□□ 1.17
TNFAIP2-207ENST00000560562 LMTK3Q96Q04 1460 aa22.35■■□□□ 1.17
TNFAIP2-207ENST00000560562 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
TNFAIP2-207ENST00000560562 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
TNFAIP2-207ENST00000560562 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
TNFAIP2-207ENST00000560562 PLXNC1O60486 1568 aa22.31■■□□□ 1.16
TNFAIP2-207ENST00000560562 MAP3K1Q13233 1512 aa22.3■■□□□ 1.16
TNFAIP2-207ENST00000560562 SPAG9O60271 1321 aaKnown RBP22.3■■□□□ 1.16
TNFAIP2-207ENST00000560562 CAMSAP2Q08AD1 1489 aa22.29■■□□□ 1.16
TNFAIP2-207ENST00000560562 C3P01024 1663 aa22.28■■□□□ 1.16
TNFAIP2-207ENST00000560562 ADGBQ8N7X0 1667 aa22.27■■□□□ 1.16
TNFAIP2-207ENST00000560562 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
TNFAIP2-207ENST00000560562 PREX1Q8TCU6 1659 aa22.25■■□□□ 1.15
TNFAIP2-207ENST00000560562 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
TNFAIP2-207ENST00000560562 A2MP01023 1474 aa22.23■■□□□ 1.15
TNFAIP2-207ENST00000560562 SETD1BQ9UPS6 1966 aaKnown RBP22.21■■□□□ 1.15
TNFAIP2-207ENST00000560562 CCDC141Q6ZP82 1450 aa22.2■■□□□ 1.15
TNFAIP2-207ENST00000560562 ARHGEF5Q12774 1597 aa22.2■■□□□ 1.14
TNFAIP2-207ENST00000560562 HSPA2P54652 639 aa22.19■■□□□ 1.14
TNFAIP2-207ENST00000560562 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
TNFAIP2-207ENST00000560562 CLTCQ00610 1675 aaKnown RBP22.18■■□□□ 1.14
TNFAIP2-207ENST00000560562 RTEL1-TNFRSF6BF6WH68 1400 aa22.18■■□□□ 1.14
TNFAIP2-207ENST00000560562 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.14
TNFAIP2-207ENST00000560562 CNTLNQ9NXG0 1405 aa22.12■■□□□ 1.13
TNFAIP2-207ENST00000560562 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
TNFAIP2-207ENST00000560562 STRCQ7RTU9 1775 aa22.1■■□□□ 1.13
TNFAIP2-207ENST00000560562 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
TNFAIP2-207ENST00000560562 DHX29Q7Z478 1369 aaKnown RBP22.09■■□□□ 1.13
TNFAIP2-207ENST00000560562 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
TNFAIP2-207ENST00000560562 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
TNFAIP2-207ENST00000560562 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
TNFAIP2-207ENST00000560562 ESF1Q9H501 851 aaKnown RBP22.06■■□□□ 1.12
TNFAIP2-207ENST00000560562 RSPH4AQ5TD94 716 aa22.06■■□□□ 1.12
TNFAIP2-207ENST00000560562 GGT6Q6P531 493 aa22.06■■□□□ 1.12
TNFAIP2-207ENST00000560562 ZMYM3Q14202 1370 aa22.05■■□□□ 1.12
TNFAIP2-207ENST00000560562 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.11
TNFAIP2-207ENST00000560562 ILDR1Q86SU0 546 aaPredicted RBP22.01■■□□□ 1.11
TNFAIP2-207ENST00000560562 NPATQ14207 1427 aa22.01■■□□□ 1.11
TNFAIP2-207ENST00000560562 APLP2Q06481 763 aa22■■□□□ 1.11
TNFAIP2-207ENST00000560562 PTPRKQ15262 1439 aa22■■□□□ 1.11
TNFAIP2-207ENST00000560562 RNF17Q9BXT8 1623 aaKnown RBP21.99■■□□□ 1.11
TNFAIP2-207ENST00000560562 ZNF142P52746 1687 aaPredicted RBP21.99■■□□□ 1.11
TNFAIP2-207ENST00000560562 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
TNFAIP2-207ENST00000560562 DNMT1P26358 1616 aaKnown RBP21.99■■□□□ 1.11
TNFAIP2-207ENST00000560562 KIF3BO15066 747 aa21.98■■□□□ 1.11
TNFAIP2-207ENST00000560562 TSPY4P0CV99 314 aa21.98■■□□□ 1.11
TNFAIP2-207ENST00000560562 TSPY10P0CW01 314 aa21.98■■□□□ 1.11
TNFAIP2-207ENST00000560562 TCOF1Q13428 1488 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms