RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 EFCAB3Q8N7B9 438 aa9.25□□□□□ -0.93
USP8-211ENST00000560527 NLRP6P59044 892 aa9.24□□□□□ -0.93
USP8-211ENST00000560527 MARVELD3Q96A59 401 aa9.24□□□□□ -0.93
USP8-211ENST00000560527 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
USP8-211ENST00000560527 MKRN3Q13064 507 aaKnown RBP9.22□□□□□ -0.93
USP8-211ENST00000560527 EMP3P54852 163 aa9.21□□□□□ -0.94
USP8-211ENST00000560527 FBXO22Q8NEZ5 403 aa9.21□□□□□ -0.94
USP8-211ENST00000560527 PHF8Q9UPP1 1060 aa9.18□□□□□ -0.94
USP8-211ENST00000560527 BCANQ96GW7 911 aa9.15□□□□□ -0.94
USP8-211ENST00000560527 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
USP8-211ENST00000560527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.958e-8■■■■□ 23.3
USP8-211ENST00000560527 G3V3G9 751 aa9.13□□□□□ -0.95
USP8-211ENST00000560527 PDCD7Q8N8D1 485 aaKnown RBP9.13□□□□□ -0.95
USP8-211ENST00000560527 FAM205CA6NFA0 338 aa9.11□□□□□ -0.95
USP8-211ENST00000560527 PPP1R37O75864 691 aa9.11□□□□□ -0.95
USP8-211ENST00000560527 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
USP8-211ENST00000560527 HS3ST6Q96QI5 342 aa9.1□□□□□ -0.95
USP8-211ENST00000560527 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
USP8-211ENST00000560527 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
USP8-211ENST00000560527 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
USP8-211ENST00000560527 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
USP8-211ENST00000560527 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
USP8-211ENST00000560527 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
USP8-211ENST00000560527 POTEB3A0JP26 581 aa9□□□□□ -0.97
USP8-211ENST00000560527 PDE4AP27815 886 aa9□□□□□ -0.97
USP8-211ENST00000560527 POTEBQ6S5H4 581 aa9□□□□□ -0.97
USP8-211ENST00000560527 BOLA1Q9Y3E2 137 aa9□□□□□ -0.97
USP8-211ENST00000560527 DOK7Q18PE1 504 aa8.99□□□□□ -0.97
USP8-211ENST00000560527 NBR1Q14596 966 aa8.98□□□□□ -0.97
USP8-211ENST00000560527 CRISPLD2Q9H0B8 497 aa8.98□□□□□ -0.97
USP8-211ENST00000560527 ERBB3P21860 1342 aa8.98□□□□□ -0.97
USP8-211ENST00000560527 NCKAP5LQ9HCH0 1330 aa8.98□□□□□ -0.97
USP8-211ENST00000560527 RIMBP2O15034 1052 aa8.97□□□□□ -0.97
USP8-211ENST00000560527 MFSD10Q14728 455 aa8.97□□□□□ -0.97
USP8-211ENST00000560527 DPY19L2Q6NUT2 758 aa8.96□□□□□ -0.98
USP8-211ENST00000560527 HOXB1P14653 301 aaPredicted RBP8.95□□□□□ -0.98
USP8-211ENST00000560527 MICALL2Q8IY33 904 aa8.95□□□□□ -0.98
USP8-211ENST00000560527 LARP6Q9BRS8 491 aaKnown RBP8.94□□□□□ -0.98
USP8-211ENST00000560527 E2F4Q16254 413 aa8.93□□□□□ -0.98
USP8-211ENST00000560527 KCNV2Q8TDN2 545 aa8.93□□□□□ -0.98
USP8-211ENST00000560527 DDX27Q96GQ7 796 aaKnown RBP8.93□□□□□ -0.98
USP8-211ENST00000560527 GPHNQ9NQX3 736 aaPredicted RBP8.93□□□□□ -0.98
USP8-211ENST00000560527 HOXB3P14651 431 aaPredicted RBP8.92□□□□□ -0.98
USP8-211ENST00000560527 ARHGEF1Q92888 912 aaKnown RBP8.92□□□□□ -0.98
USP8-211ENST00000560527 RNF166Q96A37 237 aaPredicted RBP8.92□□□□□ -0.98
USP8-211ENST00000560527 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
USP8-211ENST00000560527 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
USP8-211ENST00000560527 MYT1LQ9UL68 1186 aa8.88□□□□□ -0.99
USP8-211ENST00000560527 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
USP8-211ENST00000560527 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
USP8-211ENST00000560527 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
USP8-211ENST00000560527 ZSWIM6Q9HCJ5 1215 aa8.86□□□□□ -0.99
USP8-211ENST00000560527 KIF3CO14782 793 aa8.85□□□□□ -0.99
USP8-211ENST00000560527 FOXK1P85037 733 aa8.85□□□□□ -0.99
USP8-211ENST00000560527 PTGER2P43116 358 aa8.84□□□□□ -0.99
USP8-211ENST00000560527 DSG2Q14126 1118 aa8.82□□□□□ -1
USP8-211ENST00000560527 ZNF687Q8N1G0 1237 aa8.81□□□□□ -1
USP8-211ENST00000560527 C2orf72A6NCS6 295 aa8.8□□□□□ -1
USP8-211ENST00000560527 TMEM92Q6UXU6 159 aa8.77□□□□□ -1.01
USP8-211ENST00000560527 PLPP6Q8IY26 295 aa8.77□□□□□ -1.01
USP8-211ENST00000560527 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
USP8-211ENST00000560527 TESPA1A2RU30 521 aaPredicted RBP8.75□□□□□ -1.01
USP8-211ENST00000560527 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
USP8-211ENST00000560527 ANKRD13DQ6ZTN6 518 aa8.75□□□□□ -1.01
USP8-211ENST00000560527 EMILIN3Q9NT22 766 aa8.75□□□□□ -1.01
USP8-211ENST00000560527 SPDYE16A6NNV3 312 aaPredicted RBP8.74□□□□□ -1.01
USP8-211ENST00000560527 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
USP8-211ENST00000560527 SEMA3EO15041 775 aa8.72□□□□□ -1.01
USP8-211ENST00000560527 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
USP8-211ENST00000560527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP8-211ENST00000560527 PDIA6Q15084 440 aa8.71□□□□□ -1.02
USP8-211ENST00000560527 DPYSL4O14531 572 aa8.7□□□□□ -1.02
USP8-211ENST00000560527 PRKCSHP14314 528 aaPredicted RBP8.7□□□□□ -1.02
USP8-211ENST00000560527 ARSIQ5FYB1 569 aa8.69□□□□□ -1.02
USP8-211ENST00000560527 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
USP8-211ENST00000560527 OXER1Q8TDS5 423 aa8.69□□□□□ -1.02
USP8-211ENST00000560527 SLC34A2O95436 690 aa8.68□□□□□ -1.02
USP8-211ENST00000560527 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
USP8-211ENST00000560527 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
USP8-211ENST00000560527 PTCD2Q8WV60 388 aaKnown RBP8.66□□□□□ -1.02
USP8-211ENST00000560527 TBC1D12O60347 775 aa8.65□□□□□ -1.02
USP8-211ENST00000560527 LSM11P83369 360 aaKnown RBP eCLIP8.65□□□□□ -1.02
USP8-211ENST00000560527 PBX2P40425 430 aa8.63□□□□□ -1.03
USP8-211ENST00000560527 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
USP8-211ENST00000560527 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP8-211ENST00000560527 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
USP8-211ENST00000560527 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
USP8-211ENST00000560527 EVI5O60447 810 aa8.58□□□□□ -1.04
USP8-211ENST00000560527 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.041e-7■■■□□ 16.1
USP8-211ENST00000560527 ANO8Q9HCE9 1232 aaPredicted RBP8.58□□□□□ -1.04
USP8-211ENST00000560527 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
USP8-211ENST00000560527 PCDHGA4Q9Y5G9 962 aa8.55□□□□□ -1.04
USP8-211ENST00000560527 NUDT7P0C024 238 aa8.54□□□□□ -1.04
USP8-211ENST00000560527 RBM26Q5T8P6 1007 aaKnown RBP8.54□□□□□ -1.04
USP8-211ENST00000560527 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
USP8-211ENST00000560527 ZMYND10O75800 440 aa8.53□□□□□ -1.04
USP8-211ENST00000560527 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
USP8-211ENST00000560527 KDM4FA0A1W2PPD8 638 aa8.52□□□□□ -1.05
USP8-211ENST00000560527 OSBPP22059 807 aa8.52□□□□□ -1.05
USP8-211ENST00000560527 PSDA5PKW4 1024 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms