RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
SNRPA1-212ENST00000560496 PLCH2O75038 1416 aa16.83■□□□□ 0.28
SNRPA1-212ENST00000560496 PTPRMP28827 1452 aa16.83■□□□□ 0.28
SNRPA1-212ENST00000560496 CDC42BPBQ9Y5S2 1711 aa16.83■□□□□ 0.28
SNRPA1-212ENST00000560496 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-212ENST00000560496 KDM5CP41229 1560 aa16.81■□□□□ 0.28
SNRPA1-212ENST00000560496 YEATS2Q9ULM3 1422 aa16.8■□□□□ 0.28
SNRPA1-212ENST00000560496 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
SNRPA1-212ENST00000560496 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
SNRPA1-212ENST00000560496 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
SNRPA1-212ENST00000560496 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
SNRPA1-212ENST00000560496 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
SNRPA1-212ENST00000560496 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
SNRPA1-212ENST00000560496 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
SNRPA1-212ENST00000560496 ABCC1P33527 1531 aa16.76■□□□□ 0.27
SNRPA1-212ENST00000560496 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
SNRPA1-212ENST00000560496 CLIP1P30622 1438 aa16.76■□□□□ 0.27
SNRPA1-212ENST00000560496 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
SNRPA1-212ENST00000560496 ABCA6Q8N139 1617 aa16.74■□□□□ 0.27
SNRPA1-212ENST00000560496 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
SNRPA1-212ENST00000560496 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
SNRPA1-212ENST00000560496 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
SNRPA1-212ENST00000560496 ARHGEF12Q9NZN5 1544 aa16.71■□□□□ 0.27
SNRPA1-212ENST00000560496 REREQ9P2R6 1566 aa16.71■□□□□ 0.27
SNRPA1-212ENST00000560496 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-212ENST00000560496 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
SNRPA1-212ENST00000560496 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-212ENST00000560496 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
SNRPA1-212ENST00000560496 ARID4BQ4LE39 1312 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-212ENST00000560496 ATP10AO60312 1499 aa16.67■□□□□ 0.26
SNRPA1-212ENST00000560496 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
SNRPA1-212ENST00000560496 EFCAB2Q5VUJ9 269 aa16.64■□□□□ 0.25
SNRPA1-212ENST00000560496 PREX1Q8TCU6 1659 aa16.64■□□□□ 0.25
SNRPA1-212ENST00000560496 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
SNRPA1-212ENST00000560496 SYCP2Q9BX26 1530 aa16.63■□□□□ 0.25
SNRPA1-212ENST00000560496 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
SNRPA1-212ENST00000560496 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
SNRPA1-212ENST00000560496 TIAM1Q13009 1591 aa16.6■□□□□ 0.25
SNRPA1-212ENST00000560496 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-212ENST00000560496 AGLP35573 1532 aa16.6■□□□□ 0.25
SNRPA1-212ENST00000560496 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
SNRPA1-212ENST00000560496 C3P01024 1663 aa16.59■□□□□ 0.25
SNRPA1-212ENST00000560496 GPATCH8Q9UKJ3 1502 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-212ENST00000560496 ILDR1Q86SU0 546 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-212ENST00000560496 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
SNRPA1-212ENST00000560496 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
SNRPA1-212ENST00000560496 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
SNRPA1-212ENST00000560496 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
SNRPA1-212ENST00000560496 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
SNRPA1-212ENST00000560496 MLECQ14165 292 aa16.53■□□□□ 0.24
SNRPA1-212ENST00000560496 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-212ENST00000560496 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
SNRPA1-212ENST00000560496 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
SNRPA1-212ENST00000560496 STRCQ7RTU9 1775 aa16.49■□□□□ 0.23
SNRPA1-212ENST00000560496 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
SNRPA1-212ENST00000560496 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
SNRPA1-212ENST00000560496 HSPA2P54652 639 aa16.46■□□□□ 0.23
SNRPA1-212ENST00000560496 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
SNRPA1-212ENST00000560496 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-212ENST00000560496 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
SNRPA1-212ENST00000560496 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-212ENST00000560496 MBD5Q9P267 1494 aa16.43■□□□□ 0.22
SNRPA1-212ENST00000560496 UHRF1BP1Q6BDS2 1440 aa16.43■□□□□ 0.22
SNRPA1-212ENST00000560496 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-212ENST00000560496 A2MP01023 1474 aa16.42■□□□□ 0.22
SNRPA1-212ENST00000560496 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
SNRPA1-212ENST00000560496 MYO3AQ8NEV4 1616 aa16.41■□□□□ 0.22
SNRPA1-212ENST00000560496 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-212ENST00000560496 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
SNRPA1-212ENST00000560496 ZNF777Q9ULD5 760 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-212ENST00000560496 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
SNRPA1-212ENST00000560496 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
SNRPA1-212ENST00000560496 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNRPA1-212ENST00000560496 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-212ENST00000560496 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
SNRPA1-212ENST00000560496 CFDP1Q9UEE9 299 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-212ENST00000560496 ARHGEF5Q12774 1597 aa16.37■□□□□ 0.21
SNRPA1-212ENST00000560496 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
SNRPA1-212ENST00000560496 FBXO41Q8TF61 875 aa16.36■□□□□ 0.21
SNRPA1-212ENST00000560496 ZNF644Q9H582 1327 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-212ENST00000560496 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
SNRPA1-212ENST00000560496 NPATQ14207 1427 aa16.35■□□□□ 0.21
SNRPA1-212ENST00000560496 LRRC9Q6ZRR7 1453 aa16.35■□□□□ 0.21
SNRPA1-212ENST00000560496 MAP3K1Q13233 1512 aa16.33■□□□□ 0.2
SNRPA1-212ENST00000560496 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
SNRPA1-212ENST00000560496 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-212ENST00000560496 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
SNRPA1-212ENST00000560496 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
SNRPA1-212ENST00000560496 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
SNRPA1-212ENST00000560496 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
SNRPA1-212ENST00000560496 RNF17Q9BXT8 1623 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-212ENST00000560496 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
SNRPA1-212ENST00000560496 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
SNRPA1-212ENST00000560496 PTPRTO14522 1441 aa16.28■□□□□ 0.2
SNRPA1-212ENST00000560496 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
SNRPA1-212ENST00000560496 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-212ENST00000560496 ESF1Q9H501 851 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-212ENST00000560496 ZC3H13Q5T200 1668 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-212ENST00000560496 LTBP4Q8N2S1 1624 aa16.26■□□□□ 0.19
SNRPA1-212ENST00000560496 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms