RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 EFCAB2Q5VUJ9 269 aa26.51■■□□□ 1.83
RPL28-209ENST00000560055 CDC42BPAQ5VT25 1732 aa26.51■■□□□ 1.83
RPL28-209ENST00000560055 CDC42BPBQ9Y5S2 1711 aa26.51■■□□□ 1.83
RPL28-209ENST00000560055 ARHGAP5Q13017 1502 aa26.5■■□□□ 1.83
RPL28-209ENST00000560055 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
RPL28-209ENST00000560055 NCOA2Q15596 1464 aa26.47■■□□□ 1.83
RPL28-209ENST00000560055 CCNB3Q8WWL7 1395 aa26.46■■□□□ 1.83
RPL28-209ENST00000560055 SUPT6HQ7KZ85 1726 aaKnown RBP26.46■■□□□ 1.83
RPL28-209ENST00000560055 ADGRL1O94910 1474 aa26.46■■□□□ 1.83
RPL28-209ENST00000560055 FRMPD1Q5SYB0 1578 aa26.45■■□□□ 1.82
RPL28-209ENST00000560055 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
RPL28-209ENST00000560055 APLP2Q06481 763 aa26.44■■□□□ 1.82
RPL28-209ENST00000560055 RAPGEF3O95398 923 aa26.43■■□□□ 1.82
RPL28-209ENST00000560055 SCAPERQ9BY12 1400 aa26.42■■□□□ 1.82
RPL28-209ENST00000560055 RICTORQ6R327 1708 aa26.4■■□□□ 1.82
RPL28-209ENST00000560055 POGZQ7Z3K3 1410 aa26.39■■□□□ 1.81
RPL28-209ENST00000560055 CFDP1Q9UEE9 299 aaPredicted RBP26.38■■□□□ 1.81
RPL28-209ENST00000560055 ABCC1P33527 1531 aa26.38■■□□□ 1.81
RPL28-209ENST00000560055 ITSN2Q9NZM3 1697 aa26.37■■□□□ 1.81
RPL28-209ENST00000560055 SAMD9LQ8IVG5 1584 aa26.36■■□□□ 1.81
RPL28-209ENST00000560055 ZMYM4Q5VZL5 1548 aa26.34■■□□□ 1.81
RPL28-209ENST00000560055 ARHGEF12Q9NZN5 1544 aa26.34■■□□□ 1.81
RPL28-209ENST00000560055 ZNF518AQ6AHZ1 1483 aa26.31■■□□□ 1.8
RPL28-209ENST00000560055 ZNF777Q9ULD5 760 aaPredicted RBP26.31■■□□□ 1.8
RPL28-209ENST00000560055 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
RPL28-209ENST00000560055 PLEKHH2Q8IVE3 1493 aa26.3■■□□□ 1.8
RPL28-209ENST00000560055 KDM5CP41229 1560 aa26.29■■□□□ 1.8
RPL28-209ENST00000560055 TRAPPC8Q9Y2L5 1435 aa26.29■■□□□ 1.8
RPL28-209ENST00000560055 SYCP2Q9BX26 1530 aa26.28■■□□□ 1.8
RPL28-209ENST00000560055 AFAP1Q8N556 730 aa26.27■■□□□ 1.8
RPL28-209ENST00000560055 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
RPL28-209ENST00000560055 MYOM3Q5VTT5 1437 aa26.27■■□□□ 1.8
RPL28-209ENST00000560055 MAGI2Q86UL8 1455 aa26.27■■□□□ 1.8
RPL28-209ENST00000560055 ARHGEF40Q8TER5 1519 aa26.24■■□□□ 1.79
RPL28-209ENST00000560055 MIA2Q96PC5 1412 aa26.23■■□□□ 1.79
RPL28-209ENST00000560055 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
RPL28-209ENST00000560055 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.795e-6■■■■□ 20.3
RPL28-209ENST00000560055 CAMSAP2Q08AD1 1489 aa26.22■■□□□ 1.79
RPL28-209ENST00000560055 YEATS2Q9ULM3 1422 aa26.22■■□□□ 1.79
RPL28-209ENST00000560055 ZFYVE16Q7Z3T8 1539 aa26.2■■□□□ 1.79
RPL28-209ENST00000560055 MLH3Q9UHC1 1453 aa26.2■■□□□ 1.78
RPL28-209ENST00000560055 HECW2Q9P2P5 1572 aa26.18■■□□□ 1.78
RPL28-209ENST00000560055 FGD6Q6ZV73 1430 aa26.14■■□□□ 1.78
RPL28-209ENST00000560055 ARHGEF5Q12774 1597 aa26.12■■□□□ 1.77
RPL28-209ENST00000560055 KIDINS220Q9ULH0 1771 aa26.11■■□□□ 1.77
RPL28-209ENST00000560055 SPAG9O60271 1321 aaKnown RBP26.11■■□□□ 1.77
RPL28-209ENST00000560055 ATP10AO60312 1499 aa26.11■■□□□ 1.77
RPL28-209ENST00000560055 CCDC141Q6ZP82 1450 aa26.11■■□□□ 1.77
RPL28-209ENST00000560055 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
RPL28-209ENST00000560055 TCOF1Q13428 1488 aaKnown RBP26.1■■□□□ 1.77
RPL28-209ENST00000560055 INO80Q9ULG1 1556 aaPredicted RBP26.09■■□□□ 1.77
RPL28-209ENST00000560055 DIP2CQ9Y2E4 1556 aa26.09■■□□□ 1.77
RPL28-209ENST00000560055 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
RPL28-209ENST00000560055 ABCA6Q8N139 1617 aa26.08■■□□□ 1.77
RPL28-209ENST00000560055 C9orf84Q5VXU9 1444 aa26.07■■□□□ 1.76
RPL28-209ENST00000560055 ATP7AQ04656 1500 aa26.07■■□□□ 1.76
RPL28-209ENST00000560055 PPARGC1BQ86YN6 1023 aaKnown RBP26.06■■□□□ 1.76
RPL28-209ENST00000560055 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
RPL28-209ENST00000560055 REREQ9P2R6 1566 aa26.05■■□□□ 1.76
RPL28-209ENST00000560055 SIGLEC1Q9BZZ2 1709 aa26.05■■□□□ 1.76
RPL28-209ENST00000560055 ADAMTSL3P82987 1691 aa26.04■■□□□ 1.76
RPL28-209ENST00000560055 MYT1LQ9UL68 1186 aa26.04■■□□□ 1.76
RPL28-209ENST00000560055 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
RPL28-209ENST00000560055 BCORL1Q5H9F3 1711 aa26.01■■□□□ 1.75
RPL28-209ENST00000560055 ABCC5O15440 1437 aa25.97■■□□□ 1.75
RPL28-209ENST00000560055 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
RPL28-209ENST00000560055 TSPY4P0CV99 314 aa25.96■■□□□ 1.75
RPL28-209ENST00000560055 TSPY10P0CW01 314 aa25.96■■□□□ 1.75
RPL28-209ENST00000560055 AGLP35573 1532 aa25.96■■□□□ 1.75
RPL28-209ENST00000560055 MADDQ8WXG6 1647 aa25.96■■□□□ 1.75
RPL28-209ENST00000560055 PTPRMP28827 1452 aa25.95■■□□□ 1.74
RPL28-209ENST00000560055 DNMT1P26358 1616 aaKnown RBP25.95■■□□□ 1.74
RPL28-209ENST00000560055 PLXNC1O60486 1568 aa25.95■■□□□ 1.74
RPL28-209ENST00000560055 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
RPL28-209ENST00000560055 DAPK1P53355 1430 aa25.94■■□□□ 1.74
RPL28-209ENST00000560055 A2MP01023 1474 aa25.93■■□□□ 1.74
RPL28-209ENST00000560055 CROCC2H7BZ55 1655 aa25.91■■□□□ 1.74
RPL28-209ENST00000560055 ADGBQ8N7X0 1667 aa25.91■■□□□ 1.74
RPL28-209ENST00000560055 FAM50AQ14320 339 aaKnown RBP25.9■■□□□ 1.74
RPL28-209ENST00000560055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.88■■□□□ 1.73
RPL28-209ENST00000560055 RRBP1Q9P2E9 1410 aaKnown RBP25.88■■□□□ 1.73
RPL28-209ENST00000560055 DHX29Q7Z478 1369 aaKnown RBP25.87■■□□□ 1.73
RPL28-209ENST00000560055 RIMS1Q86UR5 1692 aaKnown RBP25.87■■□□□ 1.73
RPL28-209ENST00000560055 MLECQ14165 292 aa25.83■■□□□ 1.73
RPL28-209ENST00000560055 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
RPL28-209ENST00000560055 ADGRL2O95490 1459 aa25.79■■□□□ 1.72
RPL28-209ENST00000560055 NCOA1Q15788 1441 aa25.79■■□□□ 1.72
RPL28-209ENST00000560055 PLPPR3Q6T4P5 718 aa25.78■■□□□ 1.72
RPL28-209ENST00000560055 KIF15Q9NS87 1388 aa25.78■■□□□ 1.72
RPL28-209ENST00000560055 DUOX2Q9NRD8 1548 aa25.77■■□□□ 1.72
RPL28-209ENST00000560055 CHIC2Q9UKJ5 165 aa25.76■■□□□ 1.71
RPL28-209ENST00000560055 ANKRD30AQ9BXX3 1397 aa25.76■■□□□ 1.71
RPL28-209ENST00000560055 FER1L4A9Z1Z3 1794 aa25.75■■□□□ 1.71
RPL28-209ENST00000560055 RRP7BPQ9NSQ0 103 aa25.74■■□□□ 1.71
RPL28-209ENST00000560055 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
RPL28-209ENST00000560055 KIF3BO15066 747 aa25.71■■□□□ 1.71
RPL28-209ENST00000560055 ROCK1Q13464 1354 aa25.7■■□□□ 1.71
RPL28-209ENST00000560055 EIF2AK4Q9P2K8 1649 aaKnown RBP25.7■■□□□ 1.71
RPL28-209ENST00000560055 GGT6Q6P531 493 aa25.69■■□□□ 1.7
RPL28-209ENST00000560055 PPP6R1Q9UPN7 881 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms