RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 CFAP74Q9C0B2 1584 aa14.17□□□□□ -0.14
SEMA4B-214ENST00000560003 CFDP1Q9UEE9 299 aaPredicted RBP14.16□□□□□ -0.14
SEMA4B-214ENST00000560003 CCNB3Q8WWL7 1395 aa14.16□□□□□ -0.14
SEMA4B-214ENST00000560003 SCAPERQ9BY12 1400 aa14.15□□□□□ -0.14
SEMA4B-214ENST00000560003 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
SEMA4B-214ENST00000560003 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
SEMA4B-214ENST00000560003 ADGRL1O94910 1474 aa14.13□□□□□ -0.15
SEMA4B-214ENST00000560003 MYT1LQ9UL68 1186 aa14.13□□□□□ -0.15
SEMA4B-214ENST00000560003 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
SEMA4B-214ENST00000560003 MAGI2Q86UL8 1455 aa14.11□□□□□ -0.15
SEMA4B-214ENST00000560003 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
SEMA4B-214ENST00000560003 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
SEMA4B-214ENST00000560003 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
SEMA4B-214ENST00000560003 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
SEMA4B-214ENST00000560003 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
SEMA4B-214ENST00000560003 MYO5CQ9NQX4 1742 aa14.08□□□□□ -0.16
SEMA4B-214ENST00000560003 RSPH4AQ5TD94 716 aa14.08□□□□□ -0.16
SEMA4B-214ENST00000560003 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
SEMA4B-214ENST00000560003 POGZQ7Z3K3 1410 aa14.07□□□□□ -0.16
SEMA4B-214ENST00000560003 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
SEMA4B-214ENST00000560003 ZNF518AQ6AHZ1 1483 aa14.07□□□□□ -0.16
SEMA4B-214ENST00000560003 PLEKHH2Q8IVE3 1493 aa14.07□□□□□ -0.16
SEMA4B-214ENST00000560003 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
SEMA4B-214ENST00000560003 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
SEMA4B-214ENST00000560003 LRRC9Q6ZRR7 1453 aa14.05□□□□□ -0.16
SEMA4B-214ENST00000560003 KANK4Q5T7N3 995 aaPredicted RBP14.04□□□□□ -0.16
SEMA4B-214ENST00000560003 TIAM1Q13009 1591 aa14.04□□□□□ -0.16
SEMA4B-214ENST00000560003 SPAG9O60271 1321 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-214ENST00000560003 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
SEMA4B-214ENST00000560003 PREX2Q70Z35 1606 aa14.01□□□□□ -0.17
SEMA4B-214ENST00000560003 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
SEMA4B-214ENST00000560003 ATP10AO60312 1499 aa14.01□□□□□ -0.17
SEMA4B-214ENST00000560003 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
SEMA4B-214ENST00000560003 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
SEMA4B-214ENST00000560003 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
SEMA4B-214ENST00000560003 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
SEMA4B-214ENST00000560003 FRMPD1Q5SYB0 1578 aa13.99□□□□□ -0.17
SEMA4B-214ENST00000560003 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 RICTORQ6R327 1708 aa13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 ABCC1P33527 1531 aa13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
SEMA4B-214ENST00000560003 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
SEMA4B-214ENST00000560003 MIA2Q96PC5 1412 aa13.97□□□□□ -0.17
SEMA4B-214ENST00000560003 ARHGEF12Q9NZN5 1544 aa13.96□□□□□ -0.17
SEMA4B-214ENST00000560003 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.17
SEMA4B-214ENST00000560003 CDC42BPAQ5VT25 1732 aa13.95□□□□□ -0.18
SEMA4B-214ENST00000560003 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
SEMA4B-214ENST00000560003 KDM5CP41229 1560 aa13.95□□□□□ -0.18
SEMA4B-214ENST00000560003 MLECQ14165 292 aa13.94□□□□□ -0.18
SEMA4B-214ENST00000560003 MYOM3Q5VTT5 1437 aa13.93□□□□□ -0.18
SEMA4B-214ENST00000560003 ITSN2Q9NZM3 1697 aa13.93□□□□□ -0.18
SEMA4B-214ENST00000560003 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
SEMA4B-214ENST00000560003 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
SEMA4B-214ENST00000560003 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
SEMA4B-214ENST00000560003 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
SEMA4B-214ENST00000560003 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
SEMA4B-214ENST00000560003 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
SEMA4B-214ENST00000560003 CCDC141Q6ZP82 1450 aa13.89□□□□□ -0.19
SEMA4B-214ENST00000560003 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
SEMA4B-214ENST00000560003 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
SEMA4B-214ENST00000560003 AGLP35573 1532 aa13.86□□□□□ -0.19
SEMA4B-214ENST00000560003 A2MP01023 1474 aa13.86□□□□□ -0.19
SEMA4B-214ENST00000560003 PTPRMP28827 1452 aa13.86□□□□□ -0.19
SEMA4B-214ENST00000560003 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
SEMA4B-214ENST00000560003 DHX29Q7Z478 1369 aaKnown RBP13.85□□□□□ -0.19
SEMA4B-214ENST00000560003 DIP2CQ9Y2E4 1556 aa13.84□□□□□ -0.19
SEMA4B-214ENST00000560003 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
SEMA4B-214ENST00000560003 GGT6Q6P531 493 aa13.84□□□□□ -0.19
SEMA4B-214ENST00000560003 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
SEMA4B-214ENST00000560003 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.2
SEMA4B-214ENST00000560003 ADAMTSL3P82987 1691 aa13.83□□□□□ -0.2
SEMA4B-214ENST00000560003 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.2
SEMA4B-214ENST00000560003 CNTLNQ9NXG0 1405 aa13.82□□□□□ -0.2
SEMA4B-214ENST00000560003 KIF3BO15066 747 aa13.82□□□□□ -0.2
SEMA4B-214ENST00000560003 KIDINS220Q9ULH0 1771 aa13.81□□□□□ -0.2
SEMA4B-214ENST00000560003 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
SEMA4B-214ENST00000560003 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
SEMA4B-214ENST00000560003 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
SEMA4B-214ENST00000560003 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
SEMA4B-214ENST00000560003 ABCC5O15440 1437 aa13.78□□□□□ -0.2
SEMA4B-214ENST00000560003 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
SEMA4B-214ENST00000560003 PPARGC1BQ86YN6 1023 aaKnown RBP13.77□□□□□ -0.21
SEMA4B-214ENST00000560003 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
SEMA4B-214ENST00000560003 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
SEMA4B-214ENST00000560003 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
SEMA4B-214ENST00000560003 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
SEMA4B-214ENST00000560003 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
SEMA4B-214ENST00000560003 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
SEMA4B-214ENST00000560003 DAPK1P53355 1430 aa13.75□□□□□ -0.21
SEMA4B-214ENST00000560003 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
SEMA4B-214ENST00000560003 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
SEMA4B-214ENST00000560003 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
SEMA4B-214ENST00000560003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEMA4B-214ENST00000560003 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
SEMA4B-214ENST00000560003 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
SEMA4B-214ENST00000560003 KIF15Q9NS87 1388 aa13.73□□□□□ -0.21
SEMA4B-214ENST00000560003 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms