RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TCOF1Q13428 1488 aaKnown RBP21.07■□□□□ 0.96
RABGGTA-212ENST00000559974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.06■□□□□ 0.96
RABGGTA-212ENST00000559974 ABCC10Q5T3U5 1492 aa21.03■□□□□ 0.96
RABGGTA-212ENST00000559974 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
RABGGTA-212ENST00000559974 KIF13AQ9H1H9 1805 aa21.02■□□□□ 0.96
RABGGTA-212ENST00000559974 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
RABGGTA-212ENST00000559974 NAIPQ13075 1403 aa20.99■□□□□ 0.95
RABGGTA-212ENST00000559974 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
RABGGTA-212ENST00000559974 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
RABGGTA-212ENST00000559974 ABCA9Q8IUA7 1624 aa20.98■□□□□ 0.95
RABGGTA-212ENST00000559974 FAM69CQ0P6D2 419 aa20.96■□□□□ 0.95
RABGGTA-212ENST00000559974 CDC42BPBQ9Y5S2 1711 aa20.95■□□□□ 0.94
RABGGTA-212ENST00000559974 MIER1Q8N108 512 aa20.94■□□□□ 0.94
RABGGTA-212ENST00000559974 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
RABGGTA-212ENST00000559974 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
RABGGTA-212ENST00000559974 SIN3AQ96ST3 1273 aa20.93■□□□□ 0.94
RABGGTA-212ENST00000559974 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
RABGGTA-212ENST00000559974 MYO5CQ9NQX4 1742 aa20.93■□□□□ 0.94
RABGGTA-212ENST00000559974 AKNAQ7Z591 1439 aa20.93■□□□□ 0.94
RABGGTA-212ENST00000559974 MAP3K4Q9Y6R4 1608 aa20.92■□□□□ 0.94
RABGGTA-212ENST00000559974 CENPBP07199 599 aaPredicted RBP20.92■□□□□ 0.94
RABGGTA-212ENST00000559974 ACIN1Q9UKV3 1341 aaKnown RBP20.91■□□□□ 0.94
RABGGTA-212ENST00000559974 GLI2P10070 1586 aa20.91■□□□□ 0.94
RABGGTA-212ENST00000559974 PREX2Q70Z35 1606 aa20.91■□□□□ 0.94
RABGGTA-212ENST00000559974 ZNF644Q9H582 1327 aaPredicted RBP20.9■□□□□ 0.94
RABGGTA-212ENST00000559974 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
RABGGTA-212ENST00000559974 PPRC1Q5VV67 1664 aaKnown RBP20.88■□□□□ 0.93
RABGGTA-212ENST00000559974 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
RABGGTA-212ENST00000559974 CD109Q6YHK3 1445 aa20.88■□□□□ 0.93
RABGGTA-212ENST00000559974 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
RABGGTA-212ENST00000559974 ITSN2Q9NZM3 1697 aa20.87■□□□□ 0.93
RABGGTA-212ENST00000559974 DNMT1P26358 1616 aaKnown RBP20.86■□□□□ 0.93
RABGGTA-212ENST00000559974 ARHGAP5Q13017 1502 aa20.86■□□□□ 0.93
RABGGTA-212ENST00000559974 PLCH2O75038 1416 aa20.85■□□□□ 0.93
RABGGTA-212ENST00000559974 ZNF777Q9ULD5 760 aaPredicted RBP20.85■□□□□ 0.93
RABGGTA-212ENST00000559974 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
RABGGTA-212ENST00000559974 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.93
RABGGTA-212ENST00000559974 RRP7BPQ9NSQ0 103 aa20.83■□□□□ 0.92
RABGGTA-212ENST00000559974 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
RABGGTA-212ENST00000559974 KDM6BO15054 1643 aa20.82■□□□□ 0.92
RABGGTA-212ENST00000559974 DAPK1P53355 1430 aa20.82■□□□□ 0.92
RABGGTA-212ENST00000559974 FANCAO15360 1455 aa20.79■□□□□ 0.92
RABGGTA-212ENST00000559974 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
RABGGTA-212ENST00000559974 ROCK1Q13464 1354 aa20.78■□□□□ 0.92
RABGGTA-212ENST00000559974 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
RABGGTA-212ENST00000559974 TONSLQ96HA7 1378 aa20.77■□□□□ 0.92
RABGGTA-212ENST00000559974 ABCC5O15440 1437 aa20.77■□□□□ 0.92
RABGGTA-212ENST00000559974 ARHGEF12Q9NZN5 1544 aa20.77■□□□□ 0.92
RABGGTA-212ENST00000559974 ARAP3Q8WWN8 1544 aa20.75■□□□□ 0.91
RABGGTA-212ENST00000559974 SYCP2Q9BX26 1530 aa20.75■□□□□ 0.91
RABGGTA-212ENST00000559974 HNRNPMP52272 730 aaKnown RBP eCLIP20.74■□□□□ 0.91
RABGGTA-212ENST00000559974 EFCAB2Q5VUJ9 269 aa20.74■□□□□ 0.91
RABGGTA-212ENST00000559974 ADGBQ8N7X0 1667 aa20.73■□□□□ 0.91
RABGGTA-212ENST00000559974 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
RABGGTA-212ENST00000559974 ABCC1P33527 1531 aa20.73■□□□□ 0.91
RABGGTA-212ENST00000559974 DENND4BO75064 1496 aaPredicted RBP20.73■□□□□ 0.91
RABGGTA-212ENST00000559974 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
RABGGTA-212ENST00000559974 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
RABGGTA-212ENST00000559974 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
RABGGTA-212ENST00000559974 TRIM52Q96A61 297 aa20.69■□□□□ 0.9
RABGGTA-212ENST00000559974 TRAPPC8Q9Y2L5 1435 aa20.68■□□□□ 0.9
RABGGTA-212ENST00000559974 COL17A1Q9UMD9 1497 aaPredicted RBP20.68■□□□□ 0.9
RABGGTA-212ENST00000559974 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
RABGGTA-212ENST00000559974 SCAPERQ9BY12 1400 aa20.67■□□□□ 0.9
RABGGTA-212ENST00000559974 NEO1Q92859 1461 aa20.66■□□□□ 0.9
RABGGTA-212ENST00000559974 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
RABGGTA-212ENST00000559974 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
RABGGTA-212ENST00000559974 AFAP1Q8N556 730 aa20.65■□□□□ 0.9
RABGGTA-212ENST00000559974 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
RABGGTA-212ENST00000559974 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
RABGGTA-212ENST00000559974 ADGRL2O95490 1459 aa20.63■□□□□ 0.89
RABGGTA-212ENST00000559974 KIAA1107Q9UPP5 1409 aa20.62■□□□□ 0.89
RABGGTA-212ENST00000559974 RICTORQ6R327 1708 aa20.61■□□□□ 0.89
RABGGTA-212ENST00000559974 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
RABGGTA-212ENST00000559974 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
RABGGTA-212ENST00000559974 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
RABGGTA-212ENST00000559974 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
RABGGTA-212ENST00000559974 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
RABGGTA-212ENST00000559974 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
RABGGTA-212ENST00000559974 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
RABGGTA-212ENST00000559974 ANKRD30AQ9BXX3 1397 aa20.54■□□□□ 0.88
RABGGTA-212ENST00000559974 KDM5CP41229 1560 aa20.54■□□□□ 0.88
RABGGTA-212ENST00000559974 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
RABGGTA-212ENST00000559974 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
RABGGTA-212ENST00000559974 ZNF518AQ6AHZ1 1483 aa20.53■□□□□ 0.88
RABGGTA-212ENST00000559974 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-212ENST00000559974 KIDINS220Q9ULH0 1771 aa20.52■□□□□ 0.88
RABGGTA-212ENST00000559974 PZPP20742 1482 aa20.52■□□□□ 0.88
RABGGTA-212ENST00000559974 RPRD2Q5VT52 1461 aaKnown RBP20.52■□□□□ 0.88
RABGGTA-212ENST00000559974 ZFYVE16Q7Z3T8 1539 aa20.52■□□□□ 0.87
RABGGTA-212ENST00000559974 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
RABGGTA-212ENST00000559974 HIRIP3Q9BW71 556 aaPredicted RBP20.51■□□□□ 0.87
RABGGTA-212ENST00000559974 FOXD1Q16676 465 aa20.5■□□□□ 0.87
RABGGTA-212ENST00000559974 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
RABGGTA-212ENST00000559974 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
RABGGTA-212ENST00000559974 ATP7AQ04656 1500 aa20.48■□□□□ 0.87
RABGGTA-212ENST00000559974 YEATS2Q9ULM3 1422 aa20.48■□□□□ 0.87
RABGGTA-212ENST00000559974 HECW2Q9P2P5 1572 aa20.48■□□□□ 0.87
RABGGTA-212ENST00000559974 MAST1Q9Y2H9 1570 aa20.48■□□□□ 0.87
RABGGTA-212ENST00000559974 ABCA6Q8N139 1617 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms