RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 ZMYM4Q5VZL5 1548 aa23.83■■□□□ 1.41
RPL28-208ENST00000559463 ARHGAP5Q13017 1502 aa23.82■■□□□ 1.4
RPL28-208ENST00000559463 ARHGEF40Q8TER5 1519 aa23.82■■□□□ 1.4
RPL28-208ENST00000559463 POGZQ7Z3K3 1410 aa23.77■■□□□ 1.4
RPL28-208ENST00000559463 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
RPL28-208ENST00000559463 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
RPL28-208ENST00000559463 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
RPL28-208ENST00000559463 SIGLEC1Q9BZZ2 1709 aa23.74■■□□□ 1.39
RPL28-208ENST00000559463 ZFYVE16Q7Z3T8 1539 aa23.73■■□□□ 1.39
RPL28-208ENST00000559463 ABCC1P33527 1531 aa23.72■■□□□ 1.39
RPL28-208ENST00000559463 EHBP1L1Q8N3D4 1523 aa23.72■■□□□ 1.39
RPL28-208ENST00000559463 BCORL1Q5H9F3 1711 aa23.71■■□□□ 1.39
RPL28-208ENST00000559463 KDM5CP41229 1560 aa23.7■■□□□ 1.38
RPL28-208ENST00000559463 ADAMTSL3P82987 1691 aa23.7■■□□□ 1.38
RPL28-208ENST00000559463 MAGI2Q86UL8 1455 aa23.69■■□□□ 1.38
RPL28-208ENST00000559463 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
RPL28-208ENST00000559463 YEATS2Q9ULM3 1422 aa23.69■■□□□ 1.38
RPL28-208ENST00000559463 MTUS2Q5JR59 1369 aa23.68■■□□□ 1.38
RPL28-208ENST00000559463 TIAM1Q13009 1591 aa23.68■■□□□ 1.38
RPL28-208ENST00000559463 SAMD9LQ8IVG5 1584 aa23.68■■□□□ 1.38
RPL28-208ENST00000559463 GPATCH8Q9UKJ3 1502 aaKnown RBP23.68■■□□□ 1.38
RPL28-208ENST00000559463 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
RPL28-208ENST00000559463 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
RPL28-208ENST00000559463 HECW2Q9P2P5 1572 aa23.65■■□□□ 1.38
RPL28-208ENST00000559463 SUPT6HQ7KZ85 1726 aaKnown RBP23.63■■□□□ 1.37
RPL28-208ENST00000559463 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
RPL28-208ENST00000559463 TRAPPC8Q9Y2L5 1435 aa23.59■■□□□ 1.37
RPL28-208ENST00000559463 SYCP2Q9BX26 1530 aa23.59■■□□□ 1.37
RPL28-208ENST00000559463 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
RPL28-208ENST00000559463 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
RPL28-208ENST00000559463 DIP2CQ9Y2E4 1556 aa23.59■■□□□ 1.37
RPL28-208ENST00000559463 KIDINS220Q9ULH0 1771 aa23.58■■□□□ 1.37
RPL28-208ENST00000559463 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
RPL28-208ENST00000559463 RIMS1Q86UR5 1692 aaKnown RBP23.56■■□□□ 1.36
RPL28-208ENST00000559463 ATP10AO60312 1499 aa23.56■■□□□ 1.36
RPL28-208ENST00000559463 C9orf84Q5VXU9 1444 aa23.55■■□□□ 1.36
RPL28-208ENST00000559463 ARID4BQ4LE39 1312 aaPredicted RBP23.55■■□□□ 1.36
RPL28-208ENST00000559463 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
RPL28-208ENST00000559463 MLH3Q9UHC1 1453 aa23.55■■□□□ 1.36
RPL28-208ENST00000559463 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
RPL28-208ENST00000559463 FER1L4A9Z1Z3 1794 aa23.54■■□□□ 1.36
RPL28-208ENST00000559463 ZNF777Q9ULD5 760 aaPredicted RBP23.53■■□□□ 1.36
RPL28-208ENST00000559463 LRRC9Q6ZRR7 1453 aa23.53■■□□□ 1.36
RPL28-208ENST00000559463 REREQ9P2R6 1566 aa23.52■■□□□ 1.36
RPL28-208ENST00000559463 PTPRMP28827 1452 aa23.51■■□□□ 1.35
RPL28-208ENST00000559463 PLEKHH2Q8IVE3 1493 aa23.51■■□□□ 1.35
RPL28-208ENST00000559463 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
RPL28-208ENST00000559463 KIAA1107Q9UPP5 1409 aa23.5■■□□□ 1.35
RPL28-208ENST00000559463 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
RPL28-208ENST00000559463 HNRNPMP52272 730 aaKnown RBP eCLIP23.45■■□□□ 1.345e-6■■■■□ 20.3
RPL28-208ENST00000559463 ATP7AQ04656 1500 aa23.44■■□□□ 1.34
RPL28-208ENST00000559463 ZNF644Q9H582 1327 aaPredicted RBP23.44■■□□□ 1.34
RPL28-208ENST00000559463 MYT1LQ9UL68 1186 aa23.43■■□□□ 1.34
RPL28-208ENST00000559463 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
RPL28-208ENST00000559463 KANK4Q5T7N3 995 aaPredicted RBP23.42■■□□□ 1.34
RPL28-208ENST00000559463 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
RPL28-208ENST00000559463 AGLP35573 1532 aa23.4■■□□□ 1.34
RPL28-208ENST00000559463 MLECQ14165 292 aa23.39■■□□□ 1.33
RPL28-208ENST00000559463 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
RPL28-208ENST00000559463 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
RPL28-208ENST00000559463 PLXNC1O60486 1568 aa23.37■■□□□ 1.33
RPL28-208ENST00000559463 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
RPL28-208ENST00000559463 CCDC141Q6ZP82 1450 aa23.33■■□□□ 1.33
RPL28-208ENST00000559463 MYOM3Q5VTT5 1437 aa23.31■■□□□ 1.32
RPL28-208ENST00000559463 C3P01024 1663 aa23.29■■□□□ 1.32
RPL28-208ENST00000559463 A2MP01023 1474 aa23.29■■□□□ 1.32
RPL28-208ENST00000559463 RTEL1-TNFRSF6BF6WH68 1400 aa23.28■■□□□ 1.32
RPL28-208ENST00000559463 APLP2Q06481 763 aa23.27■■□□□ 1.32
RPL28-208ENST00000559463 MIA2Q96PC5 1412 aa23.26■■□□□ 1.31
RPL28-208ENST00000559463 LMTK3Q96Q04 1460 aa23.26■■□□□ 1.31
RPL28-208ENST00000559463 PTPN23Q9H3S7 1636 aa23.24■■□□□ 1.31
RPL28-208ENST00000559463 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
RPL28-208ENST00000559463 MROH2AA6NES4 1674 aa23.24■■□□□ 1.31
RPL28-208ENST00000559463 CROCC2H7BZ55 1655 aa23.24■■□□□ 1.31
RPL28-208ENST00000559463 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
RPL28-208ENST00000559463 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
RPL28-208ENST00000559463 SETD1BQ9UPS6 1966 aaKnown RBP23.22■■□□□ 1.31
RPL28-208ENST00000559463 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
RPL28-208ENST00000559463 RSPH4AQ5TD94 716 aa23.2■■□□□ 1.3
RPL28-208ENST00000559463 CEBPAP49715 358 aaPredicted RBP23.17■■□□□ 1.3
RPL28-208ENST00000559463 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
RPL28-208ENST00000559463 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
RPL28-208ENST00000559463 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
RPL28-208ENST00000559463 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
RPL28-208ENST00000559463 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
RPL28-208ENST00000559463 TSPY4P0CV99 314 aa23.11■■□□□ 1.29
RPL28-208ENST00000559463 TSPY10P0CW01 314 aa23.11■■□□□ 1.29
RPL28-208ENST00000559463 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
RPL28-208ENST00000559463 SHANK2Q9UPX8 1470 aa23.11■■□□□ 1.29
RPL28-208ENST00000559463 ABCC5O15440 1437 aa23.09■■□□□ 1.29
RPL28-208ENST00000559463 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
RPL28-208ENST00000559463 EIF2AK4Q9P2K8 1649 aaKnown RBP23.09■■□□□ 1.29
RPL28-208ENST00000559463 GGT6Q6P531 493 aa23.08■■□□□ 1.29
RPL28-208ENST00000559463 DAPK1P53355 1430 aa23.07■■□□□ 1.28
RPL28-208ENST00000559463 HSPA2P54652 639 aa23.06■■□□□ 1.28
RPL28-208ENST00000559463 ZMYM3Q14202 1370 aa23.05■■□□□ 1.28
RPL28-208ENST00000559463 FAM135AQ9P2D6 1515 aa23.04■■□□□ 1.28
RPL28-208ENST00000559463 UHRF1BP1Q6BDS2 1440 aa23.04■■□□□ 1.28
RPL28-208ENST00000559463 KDM5DQ9BY66 1539 aa23.03■■□□□ 1.28
RPL28-208ENST00000559463 KIF3BO15066 747 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms