RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 YEATS2Q9ULM3 1422 aa33.52■■■□□ 2.96
TSPAN3-206ENST00000559373 ZMYM4Q5VZL5 1548 aa33.5■■■□□ 2.95
TSPAN3-206ENST00000559373 ZFYVE16Q7Z3T8 1539 aa33.49■■■□□ 2.95
TSPAN3-206ENST00000559373 TROQ12816 1431 aaPredicted RBP33.49■■■□□ 2.95
TSPAN3-206ENST00000559373 CDC42BPBQ9Y5S2 1711 aa33.49■■■□□ 2.95
TSPAN3-206ENST00000559373 ARHGAP5Q13017 1502 aa33.44■■■□□ 2.94
TSPAN3-206ENST00000559373 POGZQ7Z3K3 1410 aa33.44■■■□□ 2.94
TSPAN3-206ENST00000559373 EFCAB2Q5VUJ9 269 aa33.43■■■□□ 2.94
TSPAN3-206ENST00000559373 PLPPR3Q6T4P5 718 aa33.42■■■□□ 2.94
TSPAN3-206ENST00000559373 CLIP1P30622 1438 aa33.42■■■□□ 2.94
TSPAN3-206ENST00000559373 CASKIN1Q8WXD9 1431 aa33.42■■■□□ 2.94
TSPAN3-206ENST00000559373 MLECQ14165 292 aa33.39■■■□□ 2.94
TSPAN3-206ENST00000559373 FER1L4A9Z1Z3 1794 aa33.37■■■□□ 2.93
TSPAN3-206ENST00000559373 CDC42BPAQ5VT25 1732 aa33.36■■■□□ 2.93
TSPAN3-206ENST00000559373 CCDC18Q5T9S5 1454 aa33.35■■■□□ 2.93
TSPAN3-206ENST00000559373 MAGI2Q86UL8 1455 aa33.35■■■□□ 2.93
TSPAN3-206ENST00000559373 PREX2Q70Z35 1606 aa33.34■■■□□ 2.93
TSPAN3-206ENST00000559373 ILDR1Q86SU0 546 aaPredicted RBP33.31■■■□□ 2.92
TSPAN3-206ENST00000559373 AFAP1Q8N556 730 aa33.31■■■□□ 2.92
TSPAN3-206ENST00000559373 FYCO1Q9BQS8 1478 aa33.29■■■□□ 2.92
TSPAN3-206ENST00000559373 MYT1LQ9UL68 1186 aa33.28■■■□□ 2.92
TSPAN3-206ENST00000559373 ATP10AO60312 1499 aa33.26■■■□□ 2.92
TSPAN3-206ENST00000559373 ITSN2Q9NZM3 1697 aa33.26■■■□□ 2.91
TSPAN3-206ENST00000559373 ZNF518AQ6AHZ1 1483 aa33.25■■■□□ 2.91
TSPAN3-206ENST00000559373 KDM5CP41229 1560 aa33.23■■■□□ 2.91
TSPAN3-206ENST00000559373 C9orf84Q5VXU9 1444 aa33.21■■■□□ 2.91
TSPAN3-206ENST00000559373 ARHGEF12Q9NZN5 1544 aa33.21■■■□□ 2.91
TSPAN3-206ENST00000559373 LMTK3Q96Q04 1460 aa33.19■■■□□ 2.9
TSPAN3-206ENST00000559373 ABCC1P33527 1531 aa33.19■■■□□ 2.9
TSPAN3-206ENST00000559373 ABCA6Q8N139 1617 aa33.19■■■□□ 2.9
TSPAN3-206ENST00000559373 TRAPPC8Q9Y2L5 1435 aa33.18■■■□□ 2.9
TSPAN3-206ENST00000559373 DIP2CQ9Y2E4 1556 aa33.17■■■□□ 2.9
TSPAN3-206ENST00000559373 ZNF777Q9ULD5 760 aaPredicted RBP33.15■■■□□ 2.9
TSPAN3-206ENST00000559373 HSPA2P54652 639 aa33.12■■■□□ 2.89
TSPAN3-206ENST00000559373 SAMD9LQ8IVG5 1584 aa33.12■■■□□ 2.89
TSPAN3-206ENST00000559373 KIDINS220Q9ULH0 1771 aa33.11■■■□□ 2.89
TSPAN3-206ENST00000559373 CEBPAP49715 358 aaPredicted RBP33.07■■■□□ 2.88
TSPAN3-206ENST00000559373 GPATCH8Q9UKJ3 1502 aaKnown RBP33.06■■■□□ 2.88
TSPAN3-206ENST00000559373 MLH3Q9UHC1 1453 aa33.05■■■□□ 2.88
TSPAN3-206ENST00000559373 SYCP2Q9BX26 1530 aa33.04■■■□□ 2.88
TSPAN3-206ENST00000559373 CEP162Q5TB80 1403 aa33.02■■■□□ 2.88
TSPAN3-206ENST00000559373 HNRNPMP52272 730 aaKnown RBP eCLIP33.01■■■□□ 2.87
TSPAN3-206ENST00000559373 REREQ9P2R6 1566 aa33■■■□□ 2.87
TSPAN3-206ENST00000559373 MTUS2Q5JR59 1369 aa32.99■■■□□ 2.87
TSPAN3-206ENST00000559373 PREX1Q8TCU6 1659 aa32.99■■■□□ 2.87
TSPAN3-206ENST00000559373 SUPT6HQ7KZ85 1726 aaKnown RBP32.99■■■□□ 2.87
TSPAN3-206ENST00000559373 C3P01024 1663 aa32.97■■■□□ 2.87
TSPAN3-206ENST00000559373 CCNB3Q8WWL7 1395 aa32.96■■■□□ 2.87
TSPAN3-206ENST00000559373 CFDP1Q9UEE9 299 aaPredicted RBP32.95■■■□□ 2.87
TSPAN3-206ENST00000559373 SETD1BQ9UPS6 1966 aaKnown RBP32.94■■■□□ 2.86
TSPAN3-206ENST00000559373 LOC105371045A0A1W2PR82 267 aa32.93■■■□□ 2.86
TSPAN3-206ENST00000559373 TIAM1Q13009 1591 aa32.92■■■□□ 2.86
TSPAN3-206ENST00000559373 AGLP35573 1532 aa32.89■■■□□ 2.86
TSPAN3-206ENST00000559373 EHBP1L1Q8N3D4 1523 aa32.88■■■□□ 2.85
TSPAN3-206ENST00000559373 SPAG9O60271 1321 aaKnown RBP32.88■■■□□ 2.85
TSPAN3-206ENST00000559373 ZNF644Q9H582 1327 aaPredicted RBP32.87■■■□□ 2.85
TSPAN3-206ENST00000559373 ATP7AQ04656 1500 aa32.85■■■□□ 2.85
TSPAN3-206ENST00000559373 INO80Q9ULG1 1556 aaPredicted RBP32.84■■■□□ 2.85
TSPAN3-206ENST00000559373 ESF1Q9H501 851 aaKnown RBP32.83■■■□□ 2.85
TSPAN3-206ENST00000559373 STRCQ7RTU9 1775 aa32.81■■■□□ 2.84
TSPAN3-206ENST00000559373 PLEKHH2Q8IVE3 1493 aa32.8■■■□□ 2.84
TSPAN3-206ENST00000559373 KIAA1107Q9UPP5 1409 aa32.8■■■□□ 2.84
TSPAN3-206ENST00000559373 CLTCQ00610 1675 aaKnown RBP32.77■■■□□ 2.84
TSPAN3-206ENST00000559373 FBXO41Q8TF61 875 aa32.75■■■□□ 2.83
TSPAN3-206ENST00000559373 UHRF1BP1Q6BDS2 1440 aa32.75■■■□□ 2.83
TSPAN3-206ENST00000559373 ADGBQ8N7X0 1667 aa32.74■■■□□ 2.83
TSPAN3-206ENST00000559373 PLXNC1O60486 1568 aa32.71■■■□□ 2.83
TSPAN3-206ENST00000559373 A2MP01023 1474 aa32.71■■■□□ 2.83
TSPAN3-206ENST00000559373 NCOA2Q15596 1464 aa32.71■■■□□ 2.83
TSPAN3-206ENST00000559373 MROH2AA6NES4 1674 aa32.71■■■□□ 2.83
TSPAN3-206ENST00000559373 MBD5Q9P267 1494 aa32.69■■■□□ 2.82
TSPAN3-206ENST00000559373 GGT6Q6P531 493 aa32.66■■■□□ 2.82
TSPAN3-206ENST00000559373 CNTLNQ9NXG0 1405 aa32.65■■■□□ 2.82
TSPAN3-206ENST00000559373 CAMSAP2Q08AD1 1489 aa32.63■■■□□ 2.81
TSPAN3-206ENST00000559373 VPS8Q8N3P4 1428 aa32.63■■■□□ 2.81
TSPAN3-206ENST00000559373 ZMYM3Q14202 1370 aa32.61■■■□□ 2.81
TSPAN3-206ENST00000559373 LRRC9Q6ZRR7 1453 aa32.56■■■□□ 2.8
TSPAN3-206ENST00000559373 CERKQ8TCT0 537 aa32.56■■■□□ 2.8
TSPAN3-206ENST00000559373 CCDC141Q6ZP82 1450 aa32.54■■■□□ 2.8
TSPAN3-206ENST00000559373 KANK4Q5T7N3 995 aaPredicted RBP32.54■■■□□ 2.8
TSPAN3-206ENST00000559373 RTEL1-TNFRSF6BF6WH68 1400 aa32.51■■■□□ 2.8
TSPAN3-206ENST00000559373 MYO3AQ8NEV4 1616 aa32.5■■■□□ 2.79
TSPAN3-206ENST00000559373 CAMSAP1Q5T5Y3 1602 aa32.49■■■□□ 2.79
TSPAN3-206ENST00000559373 NPATQ14207 1427 aa32.49■■■□□ 2.79
TSPAN3-206ENST00000559373 DMRT2Q9Y5R5 561 aa32.48■■■□□ 2.79
TSPAN3-206ENST00000559373 DHX29Q7Z478 1369 aaKnown RBP32.47■■■□□ 2.79
TSPAN3-206ENST00000559373 KIF3BO15066 747 aa32.46■■■□□ 2.79
TSPAN3-206ENST00000559373 ARHGEF5Q12774 1597 aa32.45■■■□□ 2.79
TSPAN3-206ENST00000559373 PTPRKQ15262 1439 aa32.45■■■□□ 2.79
TSPAN3-206ENST00000559373 ZNF142P52746 1687 aaPredicted RBP32.44■■■□□ 2.78
TSPAN3-206ENST00000559373 NCOA1Q15788 1441 aa32.43■■■□□ 2.78
TSPAN3-206ENST00000559373 CFAP65Q6ZU64 1925 aaKnown RBP32.39■■■□□ 2.78
TSPAN3-206ENST00000559373 NCKAP5LQ9HCH0 1330 aa32.39■■■□□ 2.78
TSPAN3-206ENST00000559373 PTPRTO14522 1441 aa32.39■■■□□ 2.78
TSPAN3-206ENST00000559373 CEP170BQ9Y4F5 1589 aaPredicted RBP32.39■■■□□ 2.78
TSPAN3-206ENST00000559373 RSPH4AQ5TD94 716 aa32.38■■■□□ 2.77
TSPAN3-206ENST00000559373 MAP3K1Q13233 1512 aa32.37■■■□□ 2.77
TSPAN3-206ENST00000559373 TSPY4P0CV99 314 aa32.37■■■□□ 2.77
TSPAN3-206ENST00000559373 TSPY10P0CW01 314 aa32.37■■■□□ 2.77
TSPAN3-206ENST00000559373 PPP6R1Q9UPN7 881 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms