RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 RAPGEF3O95398 923 aa18.14■□□□□ 0.49
BMP4-204ENST00000558961 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
BMP4-204ENST00000558961 ARHGAP5Q13017 1502 aa18.13■□□□□ 0.49
BMP4-204ENST00000558961 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
BMP4-204ENST00000558961 KDM5CP41229 1560 aa18.1■□□□□ 0.49
BMP4-204ENST00000558961 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
BMP4-204ENST00000558961 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
BMP4-204ENST00000558961 ABCC1P33527 1531 aa18.08■□□□□ 0.49
BMP4-204ENST00000558961 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
BMP4-204ENST00000558961 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.49
BMP4-204ENST00000558961 EFCAB2Q5VUJ9 269 aa18.08■□□□□ 0.48
BMP4-204ENST00000558961 BCORL1Q5H9F3 1711 aa18.08■□□□□ 0.48
BMP4-204ENST00000558961 ITSN2Q9NZM3 1697 aa18.08■□□□□ 0.48
BMP4-204ENST00000558961 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
BMP4-204ENST00000558961 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
BMP4-204ENST00000558961 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
BMP4-204ENST00000558961 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
BMP4-204ENST00000558961 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
BMP4-204ENST00000558961 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
BMP4-204ENST00000558961 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
BMP4-204ENST00000558961 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
BMP4-204ENST00000558961 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
BMP4-204ENST00000558961 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.47
BMP4-204ENST00000558961 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
BMP4-204ENST00000558961 REREQ9P2R6 1566 aa18■□□□□ 0.47
BMP4-204ENST00000558961 MADDQ8WXG6 1647 aa17.98■□□□□ 0.47
BMP4-204ENST00000558961 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
BMP4-204ENST00000558961 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
BMP4-204ENST00000558961 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
BMP4-204ENST00000558961 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
BMP4-204ENST00000558961 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
BMP4-204ENST00000558961 ATP10AO60312 1499 aa17.96■□□□□ 0.47
BMP4-204ENST00000558961 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
BMP4-204ENST00000558961 KIDINS220Q9ULH0 1771 aa17.96■□□□□ 0.47
BMP4-204ENST00000558961 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
BMP4-204ENST00000558961 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
BMP4-204ENST00000558961 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
BMP4-204ENST00000558961 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
BMP4-204ENST00000558961 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
BMP4-204ENST00000558961 PTPRMP28827 1452 aa17.94■□□□□ 0.46
BMP4-204ENST00000558961 AFAP1Q8N556 730 aa17.92■□□□□ 0.46
BMP4-204ENST00000558961 RIMS1Q86UR5 1692 aaKnown RBP17.92■□□□□ 0.46
BMP4-204ENST00000558961 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
BMP4-204ENST00000558961 FER1L4A9Z1Z3 1794 aa17.91■□□□□ 0.46
BMP4-204ENST00000558961 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
BMP4-204ENST00000558961 LRRC9Q6ZRR7 1453 aa17.91■□□□□ 0.46
BMP4-204ENST00000558961 AGLP35573 1532 aa17.89■□□□□ 0.45
BMP4-204ENST00000558961 ARID4BQ4LE39 1312 aaPredicted RBP17.88■□□□□ 0.45
BMP4-204ENST00000558961 CFDP1Q9UEE9 299 aaPredicted RBP17.87■□□□□ 0.45
BMP4-204ENST00000558961 ATP7AQ04656 1500 aa17.87■□□□□ 0.45
BMP4-204ENST00000558961 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
BMP4-204ENST00000558961 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
BMP4-204ENST00000558961 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
BMP4-204ENST00000558961 CAMSAP2Q08AD1 1489 aa17.82■□□□□ 0.44
BMP4-204ENST00000558961 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
BMP4-204ENST00000558961 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
BMP4-204ENST00000558961 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
BMP4-204ENST00000558961 SPAG9O60271 1321 aaKnown RBP17.78■□□□□ 0.44
BMP4-204ENST00000558961 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
BMP4-204ENST00000558961 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
BMP4-204ENST00000558961 RTEL1-TNFRSF6BF6WH68 1400 aa17.78■□□□□ 0.44
BMP4-204ENST00000558961 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
BMP4-204ENST00000558961 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
BMP4-204ENST00000558961 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
BMP4-204ENST00000558961 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
BMP4-204ENST00000558961 MROH2AA6NES4 1674 aa17.75■□□□□ 0.43
BMP4-204ENST00000558961 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
BMP4-204ENST00000558961 A2MP01023 1474 aa17.75■□□□□ 0.43
BMP4-204ENST00000558961 C3P01024 1663 aa17.74■□□□□ 0.43
BMP4-204ENST00000558961 MLECQ14165 292 aa17.73■□□□□ 0.43
BMP4-204ENST00000558961 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
BMP4-204ENST00000558961 PREX1Q8TCU6 1659 aa17.72■□□□□ 0.43
BMP4-204ENST00000558961 RSPH4AQ5TD94 716 aa17.71■□□□□ 0.43
BMP4-204ENST00000558961 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
BMP4-204ENST00000558961 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
BMP4-204ENST00000558961 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
BMP4-204ENST00000558961 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
BMP4-204ENST00000558961 CLTCQ00610 1675 aaKnown RBP17.65■□□□□ 0.42
BMP4-204ENST00000558961 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
BMP4-204ENST00000558961 APLP2Q06481 763 aa17.65■□□□□ 0.42
BMP4-204ENST00000558961 SETD1BQ9UPS6 1966 aaKnown RBP17.65■□□□□ 0.42
BMP4-204ENST00000558961 DHX29Q7Z478 1369 aaKnown RBP17.64■□□□□ 0.41
BMP4-204ENST00000558961 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
BMP4-204ENST00000558961 SHANK2Q9UPX8 1470 aa17.63■□□□□ 0.41
BMP4-204ENST00000558961 DNMT1P26358 1616 aaKnown RBP17.63■□□□□ 0.41
BMP4-204ENST00000558961 EIF2AK4Q9P2K8 1649 aaKnown RBP17.62■□□□□ 0.41
BMP4-204ENST00000558961 RNF17Q9BXT8 1623 aaKnown RBP17.61■□□□□ 0.41
BMP4-204ENST00000558961 NPATQ14207 1427 aa17.6■□□□□ 0.41
BMP4-204ENST00000558961 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
BMP4-204ENST00000558961 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
BMP4-204ENST00000558961 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
BMP4-204ENST00000558961 UHRF1BP1Q6BDS2 1440 aa17.57■□□□□ 0.4
BMP4-204ENST00000558961 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
BMP4-204ENST00000558961 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
BMP4-204ENST00000558961 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
BMP4-204ENST00000558961 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
BMP4-204ENST00000558961 ABCC5O15440 1437 aa17.56■□□□□ 0.4
BMP4-204ENST00000558961 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
BMP4-204ENST00000558961 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
BMP4-204ENST00000558961 DAPK1P53355 1430 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms